Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAATCGTCGTGTTCGCGAAATATGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTCACAGCGGAGAAGAAGAATAATAATAAGAAGCGCGGCGGCGGCGACGGCGGCGAGGAGGAGGTTGATCAGAAGAGATGCCAAATCGAAGCCTCAATTTGGTCTAAAATTGAAGAGATTTTCGGGAAAGAAGAAGAAGAATTAGAAGAAGACCGTAATTCGATTTGTCGGCCCAAGAAGAGACGATCGCGATTTCGATCCATTCAAAGTATTTACATGACCACCAAGCCCATCATTAATGCAAGATTCTCCGGCAACAGAATCATC
mRNA sequence
ATGGAAGAAGAATCGTCGTGTTCGCGAAATATGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTCACAGCGGAGAAGAAGAATAATAATAAGAAGCGCGGCGGCGGCGACGGCGGCGAGGAGGAGGTTGATCAGAAGAGATGCCAAATCGAAGCCTCAATTTGGTCTAAAATTGAAGAGATTTTCGGGAAAGAAGAAGAAGAATTAGAAGAAGACCGTAATTCGATTTGTCGGCCCAAGAAGAGACGATCGCGATTTCGATCCATTCAAAGTATTTACATGACCACCAAGCCCATCATTAATGCAAGATTCTCCGGCAACAGAATCATC
Coding sequence (CDS)
ATGGAAGAAGAATCGTCGTGTTCGCGAAATATGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTCACAGCGGAGAAGAAGAATAATAATAAGAAGCGCGGCGGCGGCGACGGCGGCGAGGAGGAGGTTGATCAGAAGAGATGCCAAATCGAAGCCTCAATTTGGTCTAAAATTGAAGAGATTTTCGGGAAAGAAGAAGAAGAATTAGAAGAAGACCGTAATTCGATTTGTCGGCCCAAGAAGAGACGATCGCGATTTCGATCCATTCAAAGTATTTACATGACCACCAAGCCCATCATTAATGCAAGATTCTCCGGCAACAGAATCATC
Protein sequence
MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGNRII
Homology
BLAST of MS011319 vs. NCBI nr
Match:
XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])
HSP 1 Score: 230.7 bits (587), Expect = 6.7e-57
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKR 60
MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKK NNKKRGGGDGGEEEVDQKR
Sbjct: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNKKRGGGDGGEEEVDQKR 60
Query: 61 CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN 120
CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN
Sbjct: 61 CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN 120
Query: 121 RII 124
RII
Sbjct: 121 RII 123
BLAST of MS011319 vs. NCBI nr
Match:
KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 157.9 bits (398), Expect = 5.5e-35
Identity = 93/128 (72.66%), Postives = 102/128 (79.69%), Query Frame = 0
Query: 2 EEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKN-----NNKKRGGGDGG-EEE 61
EE SSCSRN EEVL AAQQL+QLSNEDDSSSNVVTAE K K+ GGGDGG EEE
Sbjct: 3 EESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKIMKKKEDGGGDGGEEEE 62
Query: 62 VDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINA 121
VDQKRCQIE SI SKIEEIFGK++++ EE SICRP KR RFRSIQSIYM TKP++NA
Sbjct: 63 VDQKRCQIETSICSKIEEIFGKDDDDDEEGCGSICRPNKR--RFRSIQSIYMNTKPLVNA 122
Query: 122 RFSGNRII 124
RFSG I+
Sbjct: 123 RFSGKGIV 128
BLAST of MS011319 vs. NCBI nr
Match:
XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])
HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27
Identity = 82/132 (62.12%), Postives = 95/132 (71.97%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------E 60
MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE K N KK GGDGG E
Sbjct: 1 MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
Query: 61 EEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICRPKKRRSRFRSIQSIYMTTKP 120
EEVDQKRCQIE+S+W KIEEIFGK+ E +SI + ++ RFRSIQSIYM TKP
Sbjct: 61 EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQSIYMKTKP 120
Query: 121 IINARFSGNRII 124
I N RFS ++
Sbjct: 121 ITNGRFSTKTMV 132
BLAST of MS011319 vs. NCBI nr
Match:
KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 131.0 bits (328), Expect = 7.3e-27
Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQK 60
MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KKN K GG G EEEVDQK
Sbjct: 1 MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
Query: 61 RCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSRFRSIQSIYMTTKPII-NARF 120
RCQIE+SIW KIEEIFGK+E + +SI + ++ RFRSIQSIYM TKP+I N RF
Sbjct: 61 RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
Query: 121 SGNRII 124
S ++
Sbjct: 121 STKTMV 126
BLAST of MS011319 vs. NCBI nr
Match:
KAG6604263.1 (hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 119.0 bits (297), Expect = 2.9e-23
Identity = 86/129 (66.67%), Postives = 92/129 (71.32%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--G 60
M E+SS EEVL AAQ LMQLS EDD SSNVV A +K NKK GG G
Sbjct: 1 MGEDSS-----EEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAAEKKKNKKLKKGHGGDRG 60
Query: 61 DGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMT 118
DGG EEEVDQKR QIE SIW KIEEIFGK++E EED NSICRPKKR RFRS+QSIY+T
Sbjct: 61 DGGEEEEVDQKRYQIETSIWLKIEEIFGKDDE--EEDFNSICRPKKR--RFRSLQSIYIT 120
BLAST of MS011319 vs. ExPASy TrEMBL
Match:
A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKR 60
MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKK NNKKRGGGDGGEEEVDQKR
Sbjct: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNKKRGGGDGGEEEVDQKR 60
Query: 61 CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN 120
CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN
Sbjct: 61 CQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPIINARFSGN 120
Query: 121 RII 124
RII
Sbjct: 121 RII 123
BLAST of MS011319 vs. ExPASy TrEMBL
Match:
A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 3.5e-27
Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQK 60
MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KKN K GG G EEEVDQK
Sbjct: 1 MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQK 60
Query: 61 RCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSRFRSIQSIYMTTKPII-NARF 120
RCQIE+SIW KIEEIFGK+E + +SI + ++ RFRSIQSIYM TKP+I N RF
Sbjct: 61 RCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKPMITNGRF 120
Query: 121 SGNRII 124
S ++
Sbjct: 121 STKTMV 126
BLAST of MS011319 vs. ExPASy TrEMBL
Match:
A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 6.9e-23
Identity = 85/129 (65.89%), Postives = 92/129 (71.32%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--G 60
M E+SS EEVL AAQ LMQLS EDD SSNVV A +K NKK GG G
Sbjct: 1 MGEDSS-----EEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKNKKLKKGHGGDRG 60
Query: 61 DGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMT 118
DGG EEEVDQKR QIE SIW KIEEIFGK++E E+D NSICRPKKR RFRS+QSIY+T
Sbjct: 61 DGGEEEEVDQKRYQIETSIWLKIEEIFGKDDE--EQDFNSICRPKKR--RFRSLQSIYVT 120
BLAST of MS011319 vs. ExPASy TrEMBL
Match:
A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 70/112 (62.50%), Postives = 81/112 (72.32%), Query Frame = 0
Query: 1 MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------E 60
MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE K N KK GGDGG E
Sbjct: 1 MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCRE 60
Query: 61 EEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICRPKKRRSRFRSIQ 104
EEVDQKRCQIE+S+W KIEEIFGK+ E +SI + ++ RFRSIQ
Sbjct: 61 EEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112
BLAST of MS011319 vs. ExPASy TrEMBL
Match:
A0A067KGF9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09460 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 0
Query: 17 AAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGG-EEEVDQKRCQIEASIWSKIEEIF 76
AAQQLMQLS+ED+S+SN + EKK+ N K+ G DG EEE D+ Q E + KIEEIF
Sbjct: 21 AAQQLMQLSDEDNSNSNSIN-EKKSKNMKKSGFDGDIEEEFDRFISQDEITS-KKIEEIF 80
Query: 77 GKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPI 113
GKEEEE + SI + R+ R+RS++SIY TTK I
Sbjct: 81 GKEEEE----KISIILGRPRKKRYRSLESIYKTTKQI 111
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022133223.1 | 6.7e-57 | 99.19 | uncharacterized protein LOC111005872 [Momordica charantia] | [more] |
KAG6595108.1 | 5.5e-35 | 72.66 | hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_031742655.1 | 2.5e-27 | 62.12 | uncharacterized protein LOC116404425 [Cucumis sativus] | [more] |
KAA0025567.1 | 7.3e-27 | 64.29 | hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244... | [more] |
KAG6604263.1 | 2.9e-23 | 66.67 | hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BYI0 | 3.3e-57 | 99.19 | uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A5A7SLI9 | 3.5e-27 | 64.29 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1GFL5 | 6.9e-23 | 65.89 | uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537... | [more] |
A0A0A0KFU1 | 1.9e-20 | 62.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1 | [more] |
A0A067KGF9 | 1.9e-09 | 54.64 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09460 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |