MS011303 (gene) Bitter gourd (TR) v1

Overview


Name	MS011303
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-type E3 ubiquitin transferase
Location	scaffold239: 778477 .. 778734 (-)
RNA-Seq Expression	MS011303
Synteny	MS011303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAGCGATTTCCGATGTCCGATCTCGTTGGATGTGATGAAATCCCCTGTAAGTCTCTGCACCGGAGTCACCTACGATCGTTCCAGTATCCAGCGATGGCTCGACAATGGAAACAACACTTGCCCCGCCACGATGCAGGTCCTCCACACCAAGGAGTTCGTCCCCAATCACAATCTCCACCGTCTCATTCAGATATGGTCCGACTCGCTCCTCCACCGAGTCCACTCGCCCGAATCCTCTCCTGTTTCTGCCTCCCTC

mRNA sequence

CCGAGCGATTTCCGATGTCCGATCTCGTTGGATGTGATGAAATCCCCTGTAAGTCTCTGCACCGGAGTCACCTACGATCGTTCCAGTATCCAGCGATGGCTCGACAATGGAAACAACACTTGCCCCGCCACGATGCAGGTCCTCCACACCAAGGAGTTCGTCCCCAATCACAATCTCCACCGTCTCATTCAGATATGGTCCGACTCGCTCCTCCACCGAGTCCACTCGCCCGAATCCTCTCCTGTTTCTGCCTCCCTC

Coding sequence (CDS)

CCGAGCGATTTCCGATGTCCGATCTCGTTGGATGTGATGAAATCCCCTGTAAGTCTCTGCACCGGAGTCACCTACGATCGTTCCAGTATCCAGCGATGGCTCGACAATGGAAACAACACTTGCCCCGCCACGATGCAGGTCCTCCACACCAAGGAGTTCGTCCCCAATCACAATCTCCACCGTCTCATTCAGATATGGTCCGACTCGCTCCTCCACCGAGTCCACTCGCCCGAATCCTCTCCTGTTTCTGCCTCCCTC

Protein sequence

PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLHRLIQIWSDSLLHRVHSPESSPVSASL

Homology

[Close]

BLAST of MS011303 vs. NCBI nr
Match: XP_023003068.1 (U-box domain-containing protein 27-like [Cucurbita maxima])

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL HRVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRHRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. NCBI nr
Match: XP_023518003.1 (U-box domain-containing protein 27-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL HRVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRHRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. NCBI nr
Match: XP_022963355.1 (U-box domain-containing protein 27-like [Cucurbita moschata])

HSP 1 Score: 169.9 bits (429), Expect = 9.9e-39
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL  RVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRQRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. NCBI nr
Match: KAG7027134.1 (U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.9 bits (429), Expect = 9.9e-39
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL  RVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRQRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. NCBI nr
Match: XP_023543245.1 (U-box domain-containing protein 27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.3 bits (425), Expect = 2.9e-38
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSAS 86
          RLIQIWSDSL  R+HSP+SSPVS S
Sbjct: 71 RLIQIWSDSLRQRLHSPDSSPVSDS 95

[Close]

BLAST of MS011303 vs. ExPASy Swiss-Prot
Match: Q9FLF4 (U-box domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=PUB27 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-29
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          P+ FRCPISLDVMKSPVSLCTGVTYDR+SIQRWLD GNNTCPATMQ+L  K+F+PN  L 
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70

Query: 61 RLIQIWSDSLLHR 74
          RLI+IWSDS+  R
Sbjct: 71 RLIEIWSDSVRRR 83

[Close]

BLAST of MS011303 vs. ExPASy Swiss-Prot
Match: Q9LSA6 (U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-29
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PS F+CPISLDVM+SPVSLCTGVTYDR+SIQRWLD GNNTCPATMQ+L TK+FVPN  L 
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72

Query: 61 RLIQIWSDSL--LHRVHSPESSPVS 84
          RLI IWSDS+   H   SP  +P S
Sbjct: 73 RLINIWSDSIGRRHNGDSPVLNPPS 97

[Close]

BLAST of MS011303 vs. ExPASy Swiss-Prot
Match: Q9LXE3 (U-box domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=PUB28 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-28
Identity = 61/81 (75.31%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          P  F+CPISLDVMKSPVSL TGVTYDR SIQRWLD+GNNTCPATMQ+L  KEFVPN  LH
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71

Query: 61 RLIQIWSDSLLHRV--HSPES 80
          RLI  WSDS+  R    SPES
Sbjct: 72 RLIDHWSDSINRRADSESPES 92

[Close]

BLAST of MS011303 vs. ExPASy Swiss-Prot
Match: Q5PNY6 (U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-17
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 1   PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
           P +F+CPIS+D+MK PV + TG+TYDR SI+ W+++GN TCP T  VL T + +PNH + 
Sbjct: 32  PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91

Query: 61  RLIQIW----SDSLLHRVHSP 78
           ++IQ W       L+ R+ +P
Sbjct: 92  KMIQGWCVEKGSPLIQRIPTP 112

[Close]

BLAST of MS011303 vs. ExPASy Swiss-Prot
Match: Q9SVC6 (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.5e-17
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNG-NNTCPATMQVLHTKEFVPNHNL 60
          PS F CPISLD+MK PV + TG+TYDR SI++WL +G  N+CP T QV+   +  PNH L
Sbjct: 8  PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67

Query: 61 HRLIQIW 67
           RLIQ W
Sbjct: 68 RRLIQSW 74

[Close]

BLAST of MS011303 vs. ExPASy TrEMBL
Match: A0A6J1KVE8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111496784 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.6e-40
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL HRVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRHRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. ExPASy TrEMBL
Match: A0A6J1HHS1 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111463585 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.8e-39
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQ+L TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQILQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVSASL 87
          RLIQIWSDSL  RVHSP+SSPVS S+
Sbjct: 71 RLIQIWSDSLRQRVHSPDSSPVSDSV 96

[Close]

BLAST of MS011303 vs. ExPASy TrEMBL
Match: A0A6J1IPD9 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478747 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVS 84
          RLIQIWSDSL  R+HSP+SSPVS
Sbjct: 71 RLIQIWSDSLRQRLHSPDSSPVS 93

[Close]

BLAST of MS011303 vs. ExPASy TrEMBL
Match: A0A6J1GDY4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453282 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPESSPVS 84
          RLIQIWSDSL  R+HSP+SSPVS
Sbjct: 71 RLIQIWSDSLRQRLHSPDSSPVS 93

[Close]

BLAST of MS011303 vs. ExPASy TrEMBL
Match: A0A5A7SMT0 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1230G00310 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.1e-35
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL TKEFVPNHNLH
Sbjct: 11 PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLH 70

Query: 61 RLIQIWSDSLLHRVHSPES 80
          RLIQIWSDS   R+HSP S
Sbjct: 71 RLIQIWSDSHHQRLHSPVS 89

[Close]

BLAST of MS011303 vs. TAIR 10
Match: AT5G64660.1 (CYS, MET, PRO, and GLY protein 2 )

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-30
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          P+ FRCPISLDVMKSPVSLCTGVTYDR+SIQRWLD GNNTCPATMQ+L  K+F+PN  L 
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70

Query: 61 RLIQIWSDSLLHR 74
          RLI+IWSDS+  R
Sbjct: 71 RLIEIWSDSVRRR 83

[Close]

BLAST of MS011303 vs. TAIR 10
Match: AT3G18710.1 (plant U-box 29 )

HSP 1 Score: 128.6 bits (322), Expect = 2.3e-30
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          PS F+CPISLDVM+SPVSLCTGVTYDR+SIQRWLD GNNTCPATMQ+L TK+FVPN  L 
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72

Query: 61 RLIQIWSDSL--LHRVHSPESSPVS 84
          RLI IWSDS+   H   SP  +P S
Sbjct: 73 RLINIWSDSIGRRHNGDSPVLNPPS 97

[Close]

BLAST of MS011303 vs. TAIR 10
Match: AT5G09800.1 (ARM repeat superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 2.6e-29
Identity = 61/81 (75.31%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
          P  F+CPISLDVMKSPVSL TGVTYDR SIQRWLD+GNNTCPATMQ+L  KEFVPN  LH
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71

Query: 61 RLIQIWSDSLLHRV--HSPES 80
          RLI  WSDS+  R    SPES
Sbjct: 72 RLIDHWSDSINRRADSESPES 92

[Close]

BLAST of MS011303 vs. TAIR 10
Match: AT5G37490.1 (ARM repeat superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 9.2e-19
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 1   PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHTKEFVPNHNLH 60
           P +F+CPIS+D+MK PV + TG+TYDR SI+ W+++GN TCP T  VL T + +PNH + 
Sbjct: 32  PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91

Query: 61  RLIQIW----SDSLLHRVHSP 78
           ++IQ W       L+ R+ +P
Sbjct: 92  KMIQGWCVEKGSPLIQRIPTP 112

[Close]

BLAST of MS011303 vs. TAIR 10
Match: AT3G52450.1 (plant U-box 22 )

HSP 1 Score: 87.8 bits (216), Expect = 4.6e-18
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1  PSDFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNG-NNTCPATMQVLHTKEFVPNHNL 60
          PS F CPISLD+MK PV + TG+TYDR SI++WL +G  N+CP T QV+   +  PNH L
Sbjct: 8  PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67

Query: 61 HRLIQIW 67
           RLIQ W
Sbjct: 68 RRLIQSW 74

The following BLAST results are available for this feature:

BLAST of MS011303 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003068.1	1.2e-39	91.86	U-box domain-containing protein 27-like [Cucurbita maxima]	[more]
XP_023518003.1	1.2e-39	91.86	U-box domain-containing protein 27-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963355.1	9.9e-39	90.70	U-box domain-containing protein 27-like [Cucurbita moschata]	[more]
KAG7027134.1	9.9e-39	90.70	U-box domain-containing protein 27, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023543245.1	2.9e-38	91.76	U-box domain-containing protein 27 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS011303 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLF4	1.9e-29	78.08	U-box domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=PUB27 PE=2...	[more]
Q9LSA6	3.3e-29	72.94	U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1...	[more]
Q9LXE3	3.6e-28	75.31	U-box domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=PUB28 PE=1...	[more]
Q5PNY6	1.3e-17	46.91	U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2...	[more]
Q9SVC6	6.5e-17	58.21	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]

BLAST of MS011303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVE8	5.6e-40	91.86	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111496784 P...	[more]
A0A6J1HHS1	4.8e-39	90.70	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111463585...	[more]
A0A6J1IPD9	1.8e-38	92.77	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478747 P...	[more]
A0A6J1GDY4	1.8e-38	92.77	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453282...	[more]
A0A5A7SMT0	7.1e-35	91.14	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of MS011303 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64660.1	1.4e-30	78.08	CYS, MET, PRO, and GLY protein 2	[more]
AT3G18710.1	2.3e-30	72.94	plant U-box 29	[more]
AT5G09800.1	2.6e-29	75.31	ARM repeat superfamily protein	[more]
AT5G37490.1	9.2e-19	46.91	ARM repeat superfamily protein	[more]
AT3G52450.1	4.6e-18	58.21	plant U-box 22	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 3..66 e-value: 9.4E-27 score: 104.9
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 1..67 e-value: 6.9E-18 score: 64.6
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 1..73 score: 33.482738
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..72 e-value: 5.4E-26 score: 92.5
None	No IPR available	PANTHER	PTHR22849:SF20	U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED	coord: 1..79
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 1..79
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 4..46 e-value: 1.18382E-26 score: 89.9854
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011303.1	MS011303.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity