MS011270 (gene) Bitter gourd (TR) v1

Overview
NameMS011270
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCysteine proteinase inhibitor
Locationscaffold239: 546607 .. 546984 (-)
RNA-Seq ExpressionMS011270
SyntenyMS011270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCTGTAGCGGCTGCTCAGGAGAAACTACCGGCCTTGCTCGATGGCCTAAAGAACAACAAAATATGTTTCGATATGACGCCCGAGCCGATCAAGGACATCAACAATCCAAGGGTGCAAGAGGCAGGAAGGTGTGCAGTGATGGAGCATAACAGCCAAACTGGGGAGAACCTGAAGTTCACTCGCGTGGTGAATGGTCTTAGACAGAGGCTGCCATTTCTTCCCATTGTTTGTCCATTCGAAGCGTGGAAGCTGCACCTTGTGGTGGAGGCCGTAAACAGTGATGGAATTGCTTGGACATATGAGACTGAGGTGTTGGATATTGCATTTGCAGGCATCTTCAAGCTCCTTTATTTCAAGGAAATTCTCCACTAC

mRNA sequence

ATGACTTCTGTAGCGGCTGCTCAGGAGAAACTACCGGCCTTGCTCGATGGCCTAAAGAACAACAAAATATGTTTCGATATGACGCCCGAGCCGATCAAGGACATCAACAATCCAAGGGTGCAAGAGGCAGGAAGGTGTGCAGTGATGGAGCATAACAGCCAAACTGGGGAGAACCTGAAGTTCACTCGCGTGGTGAATGGTCTTAGACAGAGGCTGCCATTTCTTCCCATTGTTTGTCCATTCGAAGCGTGGAAGCTGCACCTTGTGGTGGAGGCCGTAAACAGTGATGGAATTGCTTGGACATATGAGACTGAGGTGTTGGATATTGCATTTGCAGGCATCTTCAAGCTCCTTTATTTCAAGGAAATTCTCCACTAC

Coding sequence (CDS)

ATGACTTCTGTAGCGGCTGCTCAGGAGAAACTACCGGCCTTGCTCGATGGCCTAAAGAACAACAAAATATGTTTCGATATGACGCCCGAGCCGATCAAGGACATCAACAATCCAAGGGTGCAAGAGGCAGGAAGGTGTGCAGTGATGGAGCATAACAGCCAAACTGGGGAGAACCTGAAGTTCACTCGCGTGGTGAATGGTCTTAGACAGAGGCTGCCATTTCTTCCCATTGTTTGTCCATTCGAAGCGTGGAAGCTGCACCTTGTGGTGGAGGCCGTAAACAGTGATGGAATTGCTTGGACATATGAGACTGAGGTGTTGGATATTGCATTTGCAGGCATCTTCAAGCTCCTTTATTTCAAGGAAATTCTCCACTAC

Protein sequence

MTSVAAAQEKLPALLDGLKNNKICFDMTPEPIKDINNPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHLVVEAVNSDGIAWTYETEVLDIAFAGIFKLLYFKEILHY
Homology
BLAST of MS011270 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 5.7e-11
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 0

Query: 30  EPIKDINNPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHLV 89
           EPIKDIN+P+VQE G   V +HN +TGENLKF RVVNGL     F+    P       LV
Sbjct: 8   EPIKDINDPQVQEIGNLTVDDHNKKTGENLKFVRVVNGL--FAGFVDPFSPLGGTVYELV 67

Query: 90  VEAVNSDGIAWTYETEV 107
           +EA+N+  I WTY+ +V
Sbjct: 68  LEAINAGKINWTYKVKV 82

BLAST of MS011270 vs. NCBI nr
Match: XP_038897049.1 (cysteine proteinase inhibitor 5-like [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 2.8e-10
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 30  EPIKDINNPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHLV 89
           EPI++I +P VQE GR +VMEHN QTG NLKF RVVNG +Q +  +            L 
Sbjct: 28  EPIENIEDPYVQEMGRFSVMEHNKQTGANLKFIRVVNGEKQVVAGI---------NYRLR 87

Query: 90  VEAVNSDGIAWTYETEVLDIAFAGIFKLLYFKEIL 125
           +EA N   + WTYE  V D  +   +KL+YF  +L
Sbjct: 88  IEARNEMNLVWTYEAMVNDRPWEKKWKLIYFVPLL 113

BLAST of MS011270 vs. NCBI nr
Match: XP_022153704.1 (cysteine proteinase inhibitor 1-like [Momordica charantia] >XP_022153705.1 cysteine proteinase inhibitor 1-like [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-08
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 0

Query: 2   TSVAAAQEKLPALLDGLKNNKICFDMTPEPIKDI-NNPRVQEAGRCAVMEHNSQTGENLK 61
           +SVA A  +  ALL G K++ I    T  PI+++  N  VQE GR AVMEHN QTG +LK
Sbjct: 3   SSVANAPRQNDALLQGPKDDNIVGGWT--PIENVEENSYVQEIGRFAVMEHNKQTGNHLK 62

Query: 62  FTRVVNGLRQRLPFLPIVCPFEAWKLHLVVEAVNSDGIAWTYETEVLDIAFAGIFKLLYF 121
           F +V  G  Q +               L++EAVN  G+ W YE  V D  +   + L+ F
Sbjct: 63  FLKVTKGWSQVV---------AGTNYRLILEAVNMAGMIWNYEAVVWDKPWEHSWTLISF 115

Query: 122 KEIL 125
             +L
Sbjct: 123 IPLL 115

BLAST of MS011270 vs. NCBI nr
Match: TYK05428.1 (Proteinase inhibitor I25, cystatin [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 4.5e-08
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 28  TPEPIKDINNP-RVQE-AGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWK 87
           T +PI++IN+  +VQ   G+ AV +HN +TGENL+F  VVNGLR  + F+   C  E   
Sbjct: 9   TSKPIENINDDLQVQSIIGKLAVEDHNKKTGENLEFVDVVNGLRSEV-FVQPGCTHEGIL 68

Query: 88  LHLVVEAVNSDGIAWTYETEVLDI 110
            HL+VEA   +GI WTY  ++L++
Sbjct: 69  YHLLVEAKTIEGINWTYVAKLLEL 91

BLAST of MS011270 vs. NCBI nr
Match: XP_008442277.1 (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa] >TYK05422.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-07
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0

Query: 30  EPIKDIN-NPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHL 89
           +PI+DIN N  VQ+ G   V +HN +TGENLKF RVVNGL     F   + P       L
Sbjct: 8   KPIEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGL--AASFSDPISPLGGVLYEL 67

Query: 90  VVEAVNSDGIAWTYETEV-LDIAFAGIFKLLY----FKEILHY 127
           V+EA+ +  I WTY+  V    A    F +LY    FK +L Y
Sbjct: 68  VLEAITTSKINWTYKARVSKSKAITPPFHMLYSFQSFKPVLEY 108

BLAST of MS011270 vs. ExPASy TrEMBL
Match: A0A6J1DHK4 (cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021157 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.8e-09
Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 0

Query: 2   TSVAAAQEKLPALLDGLKNNKICFDMTPEPIKDI-NNPRVQEAGRCAVMEHNSQTGENLK 61
           +SVA A  +  ALL G K++ I    T  PI+++  N  VQE GR AVMEHN QTG +LK
Sbjct: 3   SSVANAPRQNDALLQGPKDDNIVGGWT--PIENVEENSYVQEIGRFAVMEHNKQTGNHLK 62

Query: 62  FTRVVNGLRQRLPFLPIVCPFEAWKLHLVVEAVNSDGIAWTYETEVLDIAFAGIFKLLYF 121
           F +V  G  Q +               L++EAVN  G+ W YE  V D  +   + L+ F
Sbjct: 63  FLKVTKGWSQVV---------AGTNYRLILEAVNMAGMIWNYEAVVWDKPWEHSWTLISF 115

Query: 122 KEIL 125
             +L
Sbjct: 123 IPLL 115

BLAST of MS011270 vs. ExPASy TrEMBL
Match: A0A5D3C2L1 (Proteinase inhibitor I25, cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001230 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 28  TPEPIKDINNP-RVQE-AGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWK 87
           T +PI++IN+  +VQ   G+ AV +HN +TGENL+F  VVNGLR  + F+   C  E   
Sbjct: 9   TSKPIENINDDLQVQSIIGKLAVEDHNKKTGENLEFVDVVNGLRSEV-FVQPGCTHEGIL 68

Query: 88  LHLVVEAVNSDGIAWTYETEVLDI 110
            HL+VEA   +GI WTY  ++L++
Sbjct: 69  YHLLVEAKTIEGINWTYVAKLLEL 91

BLAST of MS011270 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.9e-08
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0

Query: 30  EPIKDIN-NPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHL 89
           +PI+DIN N  VQ+ G   V +HN +TGENLKF RVVNGL     F   + P       L
Sbjct: 8   KPIEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGL--AASFSDPISPLGGVLYEL 67

Query: 90  VVEAVNSDGIAWTYETEV-LDIAFAGIFKLLY----FKEILHY 127
           V+EA+ +  I WTY+  V    A    F +LY    FK +L Y
Sbjct: 68  VLEAITTSKINWTYKARVSKSKAITPPFHMLYSFQSFKPVLEY 108

BLAST of MS011270 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.9e-08
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0

Query: 30  EPIKDIN-NPRVQEAGRCAVMEHNSQTGENLKFTRVVNGLRQRLPFLPIVCPFEAWKLHL 89
           +PI+DIN N  VQ+ G   V +HN +TGENLKF RVVNGL     F   + P       L
Sbjct: 8   KPIEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGL--AASFSDPISPLGGVLYEL 67

Query: 90  VVEAVNSDGIAWTYETEV-LDIAFAGIFKLLY----FKEILHY 127
           V+EA+ +  I WTY+  V    A    F +LY    FK +L Y
Sbjct: 68  VLEAITTSKINWTYKARVSKSKAITPPFHMLYSFQSFKPVLEY 108

BLAST of MS011270 vs. ExPASy TrEMBL
Match: A0A6J1IHI0 (cysteine proteinase inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111475768 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.4e-08
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 0

Query: 1   MTSVAAAQEKLPALLDGLKNNKICFDMTPEPIKDINNPRVQEAGRCAVMEHNSQTGENLK 60
           M+SVAAA +    + +G   N IC   T   IKD+N+P+VQE GR AVMEHN+Q+GE+L 
Sbjct: 1   MSSVAAASQSDGLIANG--ENMICGGWT--HIKDMNDPQVQERGRFAVMEHNNQSGEHLI 60

Query: 61  FTRVVNGLRQRLPFLPIVCPFEAWKLHLVVEAV-NSDGIAWTYETEVLDIAFAGIFKLLY 120
           F+RV +G  Q +  +            LV+ A    D   + YE  V D+ +   + L+ 
Sbjct: 61  FSRVDDGWTQVVSGI---------NYRLVIRATKEGDNGIYFYEAIVWDVPWEQSWTLIS 114

Query: 121 FKEILHY 127
           FK +L +
Sbjct: 121 FKPLLKH 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649716.15.7e-1151.95hypothetical protein Csa_012476 [Cucumis sativus][more]
XP_038897049.12.8e-1045.26cysteine proteinase inhibitor 5-like [Benincasa hispida][more]
XP_022153704.12.0e-0838.71cysteine proteinase inhibitor 1-like [Momordica charantia] >XP_022153705.1 cyste... [more]
TYK05428.14.5e-0845.24Proteinase inhibitor I25, cystatin [Cucumis melo var. makuwa][more]
XP_008442277.11.0e-0742.72PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cys... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DHK49.8e-0938.71cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A5D3C2L12.2e-0845.24Proteinase inhibitor I25, cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7TJK04.9e-0842.72Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3B5B94.9e-0842.72cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=... [more]
A0A6J1IHI06.4e-0837.80cysteine proteinase inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111475768... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 28..126
e-value: 1.1E-13
score: 53.0
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 32..122
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 32..122
e-value: 2.2E-11
score: 43.9
IPR000010Cystatin domainCDDcd00042CYcoord: 33..96
e-value: 8.51724E-5
score: 37.0684

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011270.1MS011270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity