
MS011231 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAATGCGACACTCTCCTCCAGAAAAACC ATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAATGCGACACTCTCCTCCAGAAAAACC ATGAATCGGAGAACCAACGGACCCAAGCTGGAGCTGAAACTGAACCTGTCGCCCCCGCGGGCCAGGGGCGGAGTGGAATCGCCGAGCCGGGCCGCCACCGTGTCGCCGACGTCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAGGAGGGCGCGGCGGCGAGATACTCGAACAGCCCGGAGGCGACGTCGATGATGCTTGTGGGCTGCCCGCGGTGCCTGATGTACGTTATGCTGGCGGAGGAGGACCCCAAATGCCCCAAATGTAAGAGCACCGTCCTTCTCGACGTCCTCCACGACAATGCGACACTCTCCTCCAGAAAAACC MNRRTNGPKLELKLNLSPPRARGGVESPSRAATVSPTSSPPSSCVSSEEGAAARYSNSPEATSMMLVGCPRCLMYVMLAEEDPKCPKCKSTVLLDVLHDNATLSSRKT Homology
BLAST of MS011231 vs. NCBI nr
Match: XP_022133057.1 (uncharacterized protein LOC111005745 [Momordica charantia]) HSP 1 Score: 210.7 bits (535), Expect = 6.3e-51 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MS011231 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 1.8e-37 Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0
BLAST of MS011231 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37 Identity = 91/114 (79.82%), Postives = 96/114 (84.21%), Query Frame = 0
BLAST of MS011231 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.4 bits (407), Expect = 4.4e-36 Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of MS011231 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima]) HSP 1 Score: 161.4 bits (407), Expect = 4.4e-36 Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of MS011231 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-31 Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of MS011231 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 7.6e-23 Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 0
BLAST of MS011231 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.0e-08 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of MS011231 vs. ExPASy TrEMBL
Match: A0A6J1BVJ7 (uncharacterized protein LOC111005745 OS=Momordica charantia OX=3673 GN=LOC111005745 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MS011231 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.6e-38 Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0
BLAST of MS011231 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.6e-38 Identity = 91/113 (80.53%), Postives = 96/113 (84.96%), Query Frame = 0
BLAST of MS011231 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37 Identity = 91/114 (79.82%), Postives = 96/114 (84.21%), Query Frame = 0
BLAST of MS011231 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36 Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of MS011231 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 137.1 bits (344), Expect = 8.3e-33 Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of MS011231 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.8 bits (268), Expect = 5.4e-24 Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 0
BLAST of MS011231 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.9e-09 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of MS011231 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of MS011231 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04 Identity = 19/50 (38.00%), Postives = 30/50 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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