MS011221 (gene) Bitter gourd (TR) v1

Overview


Name	MS011221
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAC domain-containing protein
Location	scaffold239: 199195 .. 200027 (+)
RNA-Seq Expression	MS011221
Synteny	MS011221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATTATTTGACACCTGGGTTTAGGTTTTACCCTACTGAGGAAGAATTGGTTTCTTTCTATTTGCATAACAAGCTTGAAGATGGAAGAGATGATTTGAAACAAGTGATGGATCAAATCATACCCGTTTTGGATATTTATGACTTCAATCCTTGGAATCTTCCACGTAAATTCTTTTTATATATATCTGATCTCTATGTGTTCTTCATTTTTTCTAACTAATTTATTTGATTTCCTTCTTCTCTTTCATTATCCTTTCGGAAGATGTTGTAGGGATGTTATATGAAAATTGATATCGAAAAAAAAAGATAACAATGAAACTTTAGAAGCGTAGCATCGAAACTTTCTTAGATTTGACCTCAAACAATCCAATCATCCAATACCCATATTTAATATTAGAGTTTTCGTCGGACCTAAAAGTTTTAGTGATTTTATTTTTCATTCCATTTTTAATTAACACCCTTTATCGCATGTTCAAATATTAGTTATTTCGTGAGATCTAATAATTAATTAATTTGAGTTACGTTTAAAATAATTTTTTGCTCTAATACTATGTTAAATTATCGTGTTTGGCAGAGTTTGCTGGAGAGGTGTGTAGGAGAGACGAAGAGCAATGGTTTTTCTTCGTACCAATGCACGAGAGTGAAGCGAGAGGAGGGAGAGCAAAGAGATTGACAATCACTGGGTATTGGAAAGCTACTGGTTCTCCAAGCCAGGTTTATTCCTCAAACCATAGAAGCATTGGAGTTAAAAGGACTATGGTTTTCTACAATGGAAGAGCTCCCACAGGAACAAAGACTCAATGGAAGATGAATGAATATAAAGCCATT

mRNA sequence

ATGGAGGATTATTTGACACCTGGGTTTAGGTTTTACCCTACTGAGGAAGAATTGGTTTCTTTCTATTTGCATAACAAGCTTGAAGATGGAAGAGATGATTTGAAACAAGTGATGGATCAAATCATACCCGTTTTGGATATTTATGACTTCAATCCTTGGAATCTTCCACAGTTTGCTGGAGAGGTGTGTAGGAGAGACGAAGAGCAATGGTTTTTCTTCGTACCAATGCACGAGAGTGAAGCGAGAGGAGGGAGAGCAAAGAGATTGACAATCACTGGGTATTGGAAAGCTACTGGTTCTCCAAGCCAGGTTTATTCCTCAAACCATAGAAGCATTGGAGTTAAAAGGACTATGGTTTTCTACAATGGAAGAGCTCCCACAGGAACAAAGACTCAATGGAAGATGAATGAATATAAAGCCATT

Coding sequence (CDS)

ATGGAGGATTATTTGACACCTGGGTTTAGGTTTTACCCTACTGAGGAAGAATTGGTTTCTTTCTATTTGCATAACAAGCTTGAAGATGGAAGAGATGATTTGAAACAAGTGATGGATCAAATCATACCCGTTTTGGATATTTATGACTTCAATCCTTGGAATCTTCCACAGTTTGCTGGAGAGGTGTGTAGGAGAGACGAAGAGCAATGGTTTTTCTTCGTACCAATGCACGAGAGTGAAGCGAGAGGAGGGAGAGCAAAGAGATTGACAATCACTGGGTATTGGAAAGCTACTGGTTCTCCAAGCCAGGTTTATTCCTCAAACCATAGAAGCATTGGAGTTAAAAGGACTATGGTTTTCTACAATGGAAGAGCTCCCACAGGAACAAAGACTCAATGGAAGATGAATGAATATAAAGCCATT

Protein sequence

MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAGEVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVFYNGRAPTGTKTQWKMNEYKAI

Homology

[Close]

BLAST of MS011221 vs. NCBI nr
Match: XP_022133167.1 (NAC domain-containing protein 90-like [Momordica charantia])

HSP 1 Score: 301.2 bits (770), Expect = 4.6e-78
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLP+FAG
Sbjct: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPRFAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC RDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF
Sbjct: 61  EVCGRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAPTGTKTQWKMNEYKAI
Sbjct: 121 YNGRAPTGTKTQWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. NCBI nr
Match: XP_038883245.1 (NAC domain-containing protein 90-like [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           ME+YL PGFRFYPTEEEL+SFYL NKLEDGRDDLKQVMDQIIP+LDIYDFNPW+LPQ+AG
Sbjct: 1   MENYLIPGFRFYPTEEELISFYLQNKLEDGRDDLKQVMDQIIPILDIYDFNPWDLPQYAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSS-NHRSIGVKRTMV 120
           EVC+RDEEQWF+F+P  ESEARGGR KRLT TGYWKATGSPS VYSS NH+SIGVKRTMV
Sbjct: 61  EVCKRDEEQWFYFIPRQESEARGGRPKRLTTTGYWKATGSPSHVYSSNNHKSIGVKRTMV 120

Query: 121 FYNGRAPTGTKTQWKMNEYKAI 142
           FYNGRAPTGTKT+WKMNEYKA+
Sbjct: 121 FYNGRAPTGTKTEWKMNEYKAM 142

[Close]

BLAST of MS011221 vs. NCBI nr
Match: XP_004143388.1 (NAC domain-containing protein 90 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 118/142 (83.10%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLE-DGRDDLKQVMDQIIPVLDIYDFNPWNLPQFA 60
           ME+YL PGFRFYPTEEEL+SFYL +KLE DG DDLKQ MDQIIP+LDIY+FNPW+LPQ+A
Sbjct: 1   MENYLIPGFRFYPTEEELISFYLQHKLEDDGDDDLKQAMDQIIPILDIYNFNPWDLPQYA 60

Query: 61  GEVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMV 120
           GEVCRRDEEQWF+F+P  ESEARGGR KRLT TGYWKATGSPS VY SN++SIGVKRTMV
Sbjct: 61  GEVCRRDEEQWFYFIPRQESEARGGRPKRLTSTGYWKATGSPSHVYCSNNKSIGVKRTMV 120

Query: 121 FYNGRAPTGTKTQWKMNEYKAI 142
           FYNGRAP GTKT+WKMNEYKAI
Sbjct: 121 FYNGRAPNGTKTEWKMNEYKAI 142

[Close]

BLAST of MS011221 vs. NCBI nr
Match: XP_022972710.1 (NAC domain-containing protein 90-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 115/141 (81.56%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           ME+YL PGFRFYPTEEELVSFYL+ KLEDGR DLKQ MDQIIP+LDIYDFNPW+LP++AG
Sbjct: 1   MENYLIPGFRFYPTEEELVSFYLNTKLEDGRHDLKQEMDQIIPILDIYDFNPWDLPRYAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC+RD+EQWFFF+   ESEARGGR KRLT TGYWKATGSPS VYSS H++IG+K+TMVF
Sbjct: 61  EVCKRDKEQWFFFIARQESEARGGRPKRLTTTGYWKATGSPSHVYSSTHKTIGLKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAP GTKT+WKMNEYKAI
Sbjct: 121 YNGRAPHGTKTEWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. NCBI nr
Match: XP_023518842.1 (NAC domain-containing protein 90-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 115/141 (81.56%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           ME+YL PGFRFYPTEEELVSFYL+ KLEDGR DLKQ MDQIIP+LDIYDFNPW+LP++AG
Sbjct: 1   MENYLIPGFRFYPTEEELVSFYLNTKLEDGRHDLKQEMDQIIPILDIYDFNPWDLPRYAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC+RD+EQWFFF+   ESEARGGR KRLT TGYWKATGSPS VYSS H++IG+K+TMVF
Sbjct: 61  EVCKRDKEQWFFFIARQESEARGGRPKRLTTTGYWKATGSPSHVYSSTHKTIGLKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAP GTKT+WKMNEYKAI
Sbjct: 121 YNGRAPHGTKTEWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. ExPASy Swiss-Prot
Match: Q9FMR3 (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.8e-47
Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           M D +T GFRFYPTEEELVSFYL N+LE   DD    M ++IPVLD+++  P +LP  AG
Sbjct: 1   MADEVTIGFRFYPTEEELVSFYLRNQLEGRSDD---SMHRVIPVLDVFEVEPSHLPNVAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
             CR D EQWFFFVP  E EARGGR  R T +GYWKATGSP  V+S +++ IG K+TMVF
Sbjct: 61  VRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           Y G+APTG KT+WKMNEY A+
Sbjct: 121 YTGKAPTGRKTKWKMNEYHAV 138

[Close]

BLAST of MS011221 vs. ExPASy Swiss-Prot
Match: Q9M290 (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.6e-43
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           M + L+ GFRFYPTE EL+++YL  +L  G       +  +IP+LD++   P  LP  AG
Sbjct: 1   MGEELSVGFRFYPTEVELLTYYLRIQLGGG----NATIHSLIPILDVFSVEPTQLPNLAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           E CR D EQW FFVP  E EARGGR  R T +GYWKATGSP  V+S ++R IGVK+TMVF
Sbjct: 61  ERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           Y G+APTG KT+WKMNEYKA+
Sbjct: 121 YTGKAPTGRKTKWKMNEYKAV 137

[Close]

BLAST of MS011221 vs. ExPASy Swiss-Prot
Match: Q9ZVP8 (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-32
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 3   DYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAGEV 62
           D + PGFRF+PTEEEL+ FYL  K+E  R ++     ++I  LD+Y ++PW LP  A   
Sbjct: 49  DMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-----ELITFLDLYRYDPWELPAMAA-- 108

Query: 63  CRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVFYN 122
               E++W+F+VP       G R  R+T +GYWKATG+   + S   R IG+K+T+VFY+
Sbjct: 109 --IGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYS 168

Query: 123 GRAPTGTKTQWKMNEYK 140
           G+AP GT+T W MNEY+
Sbjct: 169 GKAPKGTRTSWIMNEYR 176

[Close]

BLAST of MS011221 vs. ExPASy Swiss-Prot
Match: Q9ZVH0 (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 62/140 (44.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           MED L PGFRF+PT+EELVSFYL  K++        +  ++I  LDIY ++PW+LP+FA 
Sbjct: 12  MEDVLLPGFRFHPTDEELVSFYLKRKVQH-----NPLSIELIRQLDIYKYDPWDLPKFA- 71

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSS-NHRSIGVKRTMV 120
                 E++W+F+ P         R  R+T  G+WKATG+   +YSS  ++ IG+K+++V
Sbjct: 72  ---MTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLV 131

Query: 121 FYNGRAPTGTKTQWKMNEYK 140
           FY GRA  G KT W M+E++
Sbjct: 132 FYKGRAAKGVKTDWMMHEFR 142

[Close]

BLAST of MS011221 vs. ExPASy Swiss-Prot
Match: Q9LKG8 (NAC domain-containing protein 91 OS=Arabidopsis thaliana OX=3702 GN=NAC091 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.1e-29
Identity = 61/136 (44.85%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 5   LTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAGEVCR 64
           L  GFRF PT+EELV +YL  K+    +D++     +I  +DI  + PW+LP F+  V +
Sbjct: 13  LPVGFRFSPTDEELVRYYLRLKINGHDNDVR-----VIREIDICKWEPWDLPDFS--VVK 72

Query: 65  RDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVFYNGR 124
             + +W FF P+      G R  R T+ GYWKATG   ++ S   + IGVKRT+VFY GR
Sbjct: 73  TTDSEWLFFCPLDRKYPSGSRMNRATVAGYWKATGKDRKIKSGKTKIIGVKRTLVFYTGR 132

Query: 125 APTGTKTQWKMNEYKA 141
           AP GT+T W M+EY+A
Sbjct: 133 APKGTRTCWIMHEYRA 141

[Close]

BLAST of MS011221 vs. ExPASy TrEMBL
Match: A0A6J1BVW3 (NAC domain-containing protein 90-like OS=Momordica charantia OX=3673 GN=LOC111005837 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLP+FAG
Sbjct: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPRFAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC RDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF
Sbjct: 61  EVCGRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAPTGTKTQWKMNEYKAI
Sbjct: 121 YNGRAPTGTKTQWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. ExPASy TrEMBL
Match: A0A6J1I9F5 (NAC domain-containing protein 90-like OS=Cucurbita maxima OX=3661 GN=LOC111471231 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 115/141 (81.56%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           ME+YL PGFRFYPTEEELVSFYL+ KLEDGR DLKQ MDQIIP+LDIYDFNPW+LP++AG
Sbjct: 1   MENYLIPGFRFYPTEEELVSFYLNTKLEDGRHDLKQEMDQIIPILDIYDFNPWDLPRYAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC+RD+EQWFFF+   ESEARGGR KRLT TGYWKATGSPS VYSS H++IG+K+TMVF
Sbjct: 61  EVCKRDKEQWFFFIARQESEARGGRPKRLTTTGYWKATGSPSHVYSSTHKTIGLKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAP GTKT+WKMNEYKAI
Sbjct: 121 YNGRAPHGTKTEWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. ExPASy TrEMBL
Match: A0A6J1HJG9 (NAC domain-containing protein 90-like OS=Cucurbita moschata OX=3662 GN=LOC111463503 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 114/141 (80.85%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           ME+YL PGFRFYPTEEELVSFYL+ KLEDGR DLKQ MDQIIP+LDIY+FNPW+LP++AG
Sbjct: 1   MENYLIPGFRFYPTEEELVSFYLNTKLEDGRHDLKQEMDQIIPILDIYEFNPWDLPRYAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           EVC+RD+EQWFFF+   ESEARGGR KRLT TGYWKATGSPS VYSS H++IG+K+TMVF
Sbjct: 61  EVCKRDKEQWFFFIARQESEARGGRPKRLTTTGYWKATGSPSHVYSSTHKTIGLKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           YNGRAP GTKT+WKMNEYKAI
Sbjct: 121 YNGRAPHGTKTEWKMNEYKAI 141

[Close]

BLAST of MS011221 vs. ExPASy TrEMBL
Match: A0A1S3CHI8 (NAC domain-containing protein 90-like OS=Cucumis melo OX=3656 GN=LOC103500974 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 115/142 (80.99%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLE-DGRDDLKQVMDQIIPVLDIYDFNPWNLPQFA 60
           ME+YL PGFRFYPTEEEL+SFYL  KLE DG DDLKQ+MDQI+P+LDIYDFNPW+LPQ+A
Sbjct: 1   MENYLIPGFRFYPTEEELISFYLQKKLEDDGSDDLKQLMDQIVPILDIYDFNPWDLPQYA 60

Query: 61  GEVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMV 120
           GEVC+RDEEQWF+F+P  ESEARGGR KRLT  GYWKATGSPS VY SN++SIGVKRTMV
Sbjct: 61  GEVCQRDEEQWFYFIPRQESEARGGRPKRLTSNGYWKATGSPSHVYCSNNKSIGVKRTMV 120

Query: 121 FYNGRAPTGTKTQWKMNEYKAI 142
           FY GRAP GTKT+WKMNEYKAI
Sbjct: 121 FYKGRAPNGTKTEWKMNEYKAI 142

[Close]

BLAST of MS011221 vs. ExPASy TrEMBL
Match: A0A6J1BUE7 (NAC domain-containing protein 90-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005871 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 115/142 (80.99%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDD--LKQVMDQIIPVLDIYDFNPWNLPQF 60
           M DYL PGFRFYPTEEELVSFYLH+KL+    +  L ++MDQIIP+ DIY FNPW+LPQF
Sbjct: 1   MADYLPPGFRFYPTEEELVSFYLHHKLDAATTNHHLIKLMDQIIPLSDIYRFNPWDLPQF 60

Query: 61  AGEVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTM 120
           AGEVCRRDEEQWFFFVP  +SEARGGR KR+T +GYWKATGSPSQVYSSNHRSIG+KRTM
Sbjct: 61  AGEVCRRDEEQWFFFVPRQDSEARGGRPKRVTSSGYWKATGSPSQVYSSNHRSIGIKRTM 120

Query: 121 VFYNGRAPTGTKTQWKMNEYKA 141
           VFYNGRAP GTKTQWKMNEYKA
Sbjct: 121 VFYNGRAPKGTKTQWKMNEYKA 142

[Close]

BLAST of MS011221 vs. TAIR 10
Match: AT5G22380.1 (NAC domain containing protein 90 )

HSP 1 Score: 188.3 bits (477), Expect = 4.1e-48
Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           M D +T GFRFYPTEEELVSFYL N+LE   DD    M ++IPVLD+++  P +LP  AG
Sbjct: 1   MADEVTIGFRFYPTEEELVSFYLRNQLEGRSDD---SMHRVIPVLDVFEVEPSHLPNVAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
             CR D EQWFFFVP  E EARGGR  R T +GYWKATGSP  V+S +++ IG K+TMVF
Sbjct: 61  VRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           Y G+APTG KT+WKMNEY A+
Sbjct: 121 YTGKAPTGRKTKWKMNEYHAV 138

[Close]

BLAST of MS011221 vs. TAIR 10
Match: AT3G44350.1 (NAC domain containing protein 61 )

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-44
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           M + L+ GFRFYPTE EL+++YL  +L  G       +  +IP+LD++   P  LP  AG
Sbjct: 1   MGEELSVGFRFYPTEVELLTYYLRIQLGGG----NATIHSLIPILDVFSVEPTQLPNLAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           E CR D EQW FFVP  E EARGGR  R T +GYWKATGSP  V+S ++R IGVK+TMVF
Sbjct: 61  ERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           Y G+APTG KT+WKMNEYKA+
Sbjct: 121 YTGKAPTGRKTKWKMNEYKAV 137

[Close]

BLAST of MS011221 vs. TAIR 10
Match: AT3G44350.2 (NAC domain containing protein 61 )

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-44
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 1   MEDYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAG 60
           M + L+ GFRFYPTE EL+++YL  +L  G       +  +IP+LD++   P  LP  AG
Sbjct: 1   MGEELSVGFRFYPTEVELLTYYLRIQLGGG----NATIHSLIPILDVFSVEPTQLPNLAG 60

Query: 61  EVCRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVF 120
           E CR D EQW FFVP  E EARGGR  R T +GYWKATGSP  V+S ++R IGVK+TMVF
Sbjct: 61  ERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVF 120

Query: 121 YNGRAPTGTKTQWKMNEYKAI 142
           Y G+APTG KT+WKMNEYKA+
Sbjct: 121 YTGKAPTGRKTKWKMNEYKAV 137

[Close]

BLAST of MS011221 vs. TAIR 10
Match: AT2G02450.1 (NAC domain containing protein 35 )

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-33
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 3   DYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAGEV 62
           D + PGFRF+PTEEEL+ FYL  K+E  R ++     ++I  LD+Y ++PW LP  A   
Sbjct: 49  DMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-----ELITFLDLYRYDPWELPAMAA-- 108

Query: 63  CRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVFYN 122
               E++W+F+VP       G R  R+T +GYWKATG+   + S   R IG+K+T+VFY+
Sbjct: 109 --IGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYS 168

Query: 123 GRAPTGTKTQWKMNEYK 140
           G+AP GT+T W MNEY+
Sbjct: 169 GKAPKGTRTSWIMNEYR 176

[Close]

BLAST of MS011221 vs. TAIR 10
Match: AT2G02450.2 (NAC domain containing protein 35 )

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-33
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 3   DYLTPGFRFYPTEEELVSFYLHNKLEDGRDDLKQVMDQIIPVLDIYDFNPWNLPQFAGEV 62
           D + PGFRF+PTEEEL+ FYL  K+E  R ++     ++I  LD+Y ++PW LP  A   
Sbjct: 49  DMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-----ELITFLDLYRYDPWELPAMAA-- 108

Query: 63  CRRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATGSPSQVYSSNHRSIGVKRTMVFYN 122
               E++W+F+VP       G R  R+T +GYWKATG+   + S   R IG+K+T+VFY+
Sbjct: 109 --IGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYS 168

Query: 123 GRAPTGTKTQWKMNEYK 140
           G+AP GT+T W MNEY+
Sbjct: 169 GKAPKGTRTSWIMNEYR 176

The following BLAST results are available for this feature:

BLAST of MS011221 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133167.1	4.6e-78	98.58	NAC domain-containing protein 90-like [Momordica charantia]	[more]
XP_038883245.1	2.3e-69	86.62	NAC domain-containing protein 90-like [Benincasa hispida]	[more]
XP_004143388.1	1.6e-65	83.10	NAC domain-containing protein 90 [Cucumis sativus]	[more]
XP_022972710.1	4.5e-65	81.56	NAC domain-containing protein 90-like [Cucurbita maxima]	[more]
XP_023518842.1	4.5e-65	81.56	NAC domain-containing protein 90-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS011221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMR3	5.8e-47	62.41	NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 ...	[more]
Q9M290	6.6e-43	57.45	Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC...	[more]
Q9ZVP8	3.1e-32	45.99	NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ...	[more]
Q9ZVH0	1.4e-29	44.29	Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1	[more]
Q9LKG8	7.1e-29	44.85	NAC domain-containing protein 91 OS=Arabidopsis thaliana OX=3702 GN=NAC091 PE=1 ...	[more]

BLAST of MS011221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVW3	2.2e-78	98.58	NAC domain-containing protein 90-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1I9F5	2.2e-65	81.56	NAC domain-containing protein 90-like OS=Cucurbita maxima OX=3661 GN=LOC11147123...	[more]
A0A6J1HJG9	6.4e-65	80.85	NAC domain-containing protein 90-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A1S3CHI8	1.1e-64	80.99	NAC domain-containing protein 90-like OS=Cucumis melo OX=3656 GN=LOC103500974 PE...	[more]
A0A6J1BUE7	2.3e-62	80.99	NAC domain-containing protein 90-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]

BLAST of MS011221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22380.1	4.1e-48	62.41	NAC domain containing protein 90	[more]
AT3G44350.1	4.7e-44	57.45	NAC domain containing protein 61	[more]
AT3G44350.2	4.7e-44	57.45	NAC domain containing protein 61	[more]
AT2G02450.1	2.2e-33	45.99	NAC domain containing protein 35	[more]
AT2G02450.2	2.2e-33	45.99	NAC domain containing protein 35	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 7..139 e-value: 1.1E-30 score: 107.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 5..141 score: 43.722618
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 14..141 e-value: 8.3E-37 score: 128.3
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 4..139
None	No IPR available	PANTHER	PTHR31989:SF33	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 5..141
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 5..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011221.1	MS011221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding