MS011212 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGCCGGAACCGATGGCGGCGAAGCAGAAGCATCGCACCACGAGTCTTTGCTCAGAGATCGACTGGAATCGTCGGAGGATCAGGAATCTCAGTCTCCGTCTTCTTCGACGCCGACTGGTTCGTTCGCTATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTTCCGACGAGCTTCTTGTCGCACCCGCTCTTCCGGATGGTGCTCGACAAGGCGTACAGAGAGTTCGGATTCAAGCAGAGGAACGCGCTCGTGGTTCCTTGCAGCGTCTCCGCCTTCCAAGAAATCGTGAGCGCAGTAGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTT ATGCTGGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGCCGGAACCGATGGCGGCGAAGCAGAAGCATCGCACCACGAGTCTTTGCTCAGAGATCGACTGGAATCGTCGGAGGATCAGGAATCTCAGTCTCCGTCTTCTTCGACGCCGACTGGTTCGTTCGCTATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTTCCGACGAGCTTCTTGTCGCACCCGCTCTTCCGGATGGTGCTCGACAAGGCGTACAGAGAGTTCGGATTCAAGCAGAGGAACGCGCTCGTGGTTCCTTGCAGCGTCTCCGCCTTCCAAGAAATCGTGAGCGCAGTAGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTT ATGCTGGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGCCGGAACCGATGGCGGCGAAGCAGAAGCATCGCACCACGAGTCTTTGCTCAGAGATCGACTGGAATCGTCGGAGGATCAGGAATCTCAGTCTCCGTCTTCTTCGACGCCGACTGGTTCGTTCGCTATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTTCCGACGAGCTTCTTGTCGCACCCGCTCTTCCGGATGGTGCTCGACAAGGCGTACAGAGAGTTCGGATTCAAGCAGAGGAACGCGCTCGTGGTTCCTTGCAGCGTCTCCGCCTTCCAAGAAATCGTGAGCGCAGTAGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTT MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL Homology
BLAST of MS011212 vs. NCBI nr
Match: XP_022133168.1 (auxin-responsive protein SAUR15 [Momordica charantia]) HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0
BLAST of MS011212 vs. NCBI nr
Match: XP_022972619.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima]) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 119/136 (87.50%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of MS011212 vs. NCBI nr
Match: KAG7027194.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 228.0 bits (580), Expect = 4.8e-56 Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 0
BLAST of MS011212 vs. NCBI nr
Match: XP_022962864.1 (auxin-induced protein 6B-like [Cucurbita moschata]) HSP 1 Score: 227.3 bits (578), Expect = 8.2e-56 Identity = 118/138 (85.51%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of MS011212 vs. NCBI nr
Match: KAG6595178.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55 Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of MS011212 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-11 Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS011212 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-11 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of MS011212 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09 Identity = 24/67 (35.82%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MS011212 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.0e-09 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of MS011212 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of MS011212 vs. ExPASy TrEMBL
Match: A0A6J1BYB1 (auxin-responsive protein SAUR15 OS=Momordica charantia OX=3673 GN=LOC111005839 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0
BLAST of MS011212 vs. ExPASy TrEMBL
Match: A0A6J1IC38 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159 PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 8.0e-57 Identity = 119/136 (87.50%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of MS011212 vs. ExPASy TrEMBL
Match: A0A6J1HIA1 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111463231 PE=3 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56 Identity = 118/138 (85.51%), Postives = 127/138 (92.03%), Query Frame = 0
BLAST of MS011212 vs. ExPASy TrEMBL
Match: A0A6J1EDQ2 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55 Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0
BLAST of MS011212 vs. ExPASy TrEMBL
Match: A0A6J1ILC7 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 6.3e-54 Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of MS011212 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35 Identity = 80/141 (56.74%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of MS011212 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 81.3 bits (199), Expect = 6.7e-16 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of MS011212 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 81.3 bits (199), Expect = 6.7e-16 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of MS011212 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15 Identity = 47/131 (35.88%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of MS011212 vs. TAIR 10
Match: AT3G20220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|