MS011202 (gene) Bitter gourd (TR) v1

Overview


Name	MS011202
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold239: 111367 .. 111867 (+)
RNA-Seq Expression	MS011202
Synteny	MS011202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTGCTTGTTCGTGGAGGAGAAACCGATCAGAATCATGAAATCCGACGGCAAAATCCTGGAATACAAATCCCCGACCAGAGTTTTCCAAGTCCTCTCGGATTTCTCCGGCGGCCACGCCATCGCCGACGCCGTTCCGGTCACCCACCATCTCCACCACAGCGCCAAGCTCCTCTCCGGCCATCTCTACTTTCTCATCCCGACCGATTCGGCTCCGGAAGCCGAGGAAAAGCCGAAGAAGGCGGTCCGGTTCGCTGTTCCGGAGAAGGAAACCGGCGAAGGCGAAATCAGCGGCGGGCGTGCGATTCGGATAAAGGTGGTGATGACGAAGAAGGAGCTGGAAGAGATGATTGAAAATGGGGGGATTTGGGGCGATGAAATGATGAGTAAGATTAAAAGTAGTGGAGAAATTAGTTGCAGAGATGAATTGGAAAAGGAGGAATTGCAGAGATGGAAGCCCGCTCTCGAAAGCATACCGGAAACTGAAATTGATTGC

mRNA sequence

ATGGGGAATTGCTTGTTCGTGGAGGAGAAACCGATCAGAATCATGAAATCCGACGGCAAAATCCTGGAATACAAATCCCCGACCAGAGTTTTCCAAGTCCTCTCGGATTTCTCCGGCGGCCACGCCATCGCCGACGCCGTTCCGGTCACCCACCATCTCCACCACAGCGCCAAGCTCCTCTCCGGCCATCTCTACTTTCTCATCCCGACCGATTCGGCTCCGGAAGCCGAGGAAAAGCCGAAGAAGGCGGTCCGGTTCGCTGTTCCGGAGAAGGAAACCGGCGAAGGCGAAATCAGCGGCGGGCGTGCGATTCGGATAAAGGTGGTGATGACGAAGAAGGAGCTGGAAGAGATGATTGAAAATGGGGGGATTTGGGGCGATGAAATGATGAGTAAGATTAAAAGTAGTGGAGAAATTAGTTGCAGAGATGAATTGGAAAAGGAGGAATTGCAGAGATGGAAGCCCGCTCTCGAAAGCATACCGGAAACTGAAATTGATTGC

Coding sequence (CDS)

ATGGGGAATTGCTTGTTCGTGGAGGAGAAACCGATCAGAATCATGAAATCCGACGGCAAAATCCTGGAATACAAATCCCCGACCAGAGTTTTCCAAGTCCTCTCGGATTTCTCCGGCGGCCACGCCATCGCCGACGCCGTTCCGGTCACCCACCATCTCCACCACAGCGCCAAGCTCCTCTCCGGCCATCTCTACTTTCTCATCCCGACCGATTCGGCTCCGGAAGCCGAGGAAAAGCCGAAGAAGGCGGTCCGGTTCGCTGTTCCGGAGAAGGAAACCGGCGAAGGCGAAATCAGCGGCGGGCGTGCGATTCGGATAAAGGTGGTGATGACGAAGAAGGAGCTGGAAGAGATGATTGAAAATGGGGGGATTTGGGGCGATGAAATGATGAGTAAGATTAAAAGTAGTGGAGAAATTAGTTGCAGAGATGAATTGGAAAAGGAGGAATTGCAGAGATGGAAGCCCGCTCTCGAAAGCATACCGGAAACTGAAATTGATTGC

Protein sequence

MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLLSGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIENGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC

Homology

[Close]

BLAST of MS011202 vs. NCBI nr
Match: XP_022133156.1 (uncharacterized protein LOC111005826 [Momordica charantia])

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL
Sbjct: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE
Sbjct: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120

Query: 121 NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC 168
           NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC
Sbjct: 121 NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC 167

[Close]

BLAST of MS011202 vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima])

HSP 1 Score: 234.2 bits (596), Expect = 8.3e-58
Identity = 124/172 (72.09%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL VE+KPIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLKQTTKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPT  A   E++ KKAVRFA PEKETG GE   G+ +RIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTAGAEAVEKRGKKAVRFAEPEKETGGGE---GKVMRIKVVMTKKELEEMVE 120

Query: 121 NGGIWGDEMMSKIKS-SGEISCR----DELEKEELQRWKPALESIPETEIDC 168
            GGI  DEM+ KIKS SGEISCR    +E + EEL +W+P+L+SIPE+E+ C
Sbjct: 121 RGGITADEMICKIKSGSGEISCRELEEEEEDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of MS011202 vs. NCBI nr
Match: XP_038882971.1 (uncharacterized protein LOC120074056 [Benincasa hispida])

HSP 1 Score: 229.2 bits (583), Expect = 2.7e-56
Identity = 124/169 (73.37%), Postives = 138/169 (81.66%), Query Frame = 0


Query: 3   NCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLLSG 62
           NCLF++EKPIRIMK DGKILEYKSPTRVFQVLSDFS GH I+DAVPVTHHLH +AKLLSG
Sbjct: 5   NCLFIDEKPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHEISDAVPVTHHLHRTAKLLSG 64

Query: 63  HLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIENG 122
           HLYFLIP  +    E+K KKAVRFA PEKE      SGG  +RIKVVMTKKELEEM+E G
Sbjct: 65  HLYFLIPKQT---EEKKAKKAVRFAEPEKE------SGGGVVRIKVVMTKKELEEMVERG 124

Query: 123 GIWGDEMMSKIKS-SGEISCRD---ELEKEELQRWKPALESIPETEIDC 168
           GI  +EM+SKIKS SGEISCRD   E E+ ELQRWKP L+SIPE+E+ C
Sbjct: 125 GISAEEMISKIKSGSGEISCRDLEEEDEESELQRWKPVLQSIPESEVAC 163

[Close]

BLAST of MS011202 vs. NCBI nr
Match: XP_022962863.1 (uncharacterized protein LOC111463230 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-56
Identity = 121/174 (69.54%), Postives = 139/174 (79.89%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL V++ PIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLQQTTKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPT      E++ KKAVRFA PEKETG GE   G+ +RIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE---GKVMRIKVVMTKKELEEMVE 120

Query: 121 NGGIWGDEMMSKIKS-SGEISCR------DELEKEELQRWKPALESIPETEIDC 168
            GGI  DEM+ KIKS SGEISCR      D+ + EEL +W+P+L+SIPE+E+ C
Sbjct: 121 RGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of MS011202 vs. NCBI nr
Match: KAG7027198.1 (hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-55
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL V++ PIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLQQTTKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPT      E++ KKAVRFA PEKETG GE   G+ IRIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE---GKVIRIKVVMTKKELEEMVE 120

Query: 121 NGGIWGDEMMSKIKS-SGEISCRDELEKEELQRWKPALESIPETEIDC 168
            GGI  DEM+ KIKS SGEISC  EL+ EEL +W+P+L+SIPE+E+ C
Sbjct: 121 RGGITADEMICKIKSGSGEISC-TELD-EELHKWRPSLQSIPESEVAC 162

[Close]

BLAST of MS011202 vs. ExPASy TrEMBL
Match: A0A6J1BU81 (uncharacterized protein LOC111005826 OS=Momordica charantia OX=3673 GN=LOC111005826 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.6e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL
Sbjct: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE
Sbjct: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120

Query: 121 NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC 168
           NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC
Sbjct: 121 NGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETEIDC 167

[Close]

BLAST of MS011202 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.0e-58
Identity = 124/172 (72.09%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL VE+KPIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLKQTTKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPT  A   E++ KKAVRFA PEKETG GE   G+ +RIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTAGAEAVEKRGKKAVRFAEPEKETGGGE---GKVMRIKVVMTKKELEEMVE 120

Query: 121 NGGIWGDEMMSKIKS-SGEISCR----DELEKEELQRWKPALESIPETEIDC 168
            GGI  DEM+ KIKS SGEISCR    +E + EEL +W+P+L+SIPE+E+ C
Sbjct: 121 RGGITADEMICKIKSGSGEISCRELEEEEEDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of MS011202 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 121/174 (69.54%), Postives = 139/174 (79.89%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL V++ PIRIMK DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL  + KLL
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLQQTTKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIE 120
           SGHLYFLIPT      E++ KKAVRFA PEKETG GE   G+ +RIKVVMTKKELEEM+E
Sbjct: 61  SGHLYFLIPTAGPEAGEKRGKKAVRFAEPEKETGGGE---GKVMRIKVVMTKKELEEMVE 120

Query: 121 NGGIWGDEMMSKIKS-SGEISCR------DELEKEELQRWKPALESIPETEIDC 168
            GGI  DEM+ KIKS SGEISCR      D+ + EEL +W+P+L+SIPE+E+ C
Sbjct: 121 RGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of MS011202 vs. ExPASy TrEMBL
Match: A0A6J1IRC0 (uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.4e-55
Identity = 121/167 (72.46%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 3   NCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLLSG 62
           NCLFV++KPIRIMK+DGKILEYKSPTRVFQVLSDFS GH I+DAVPV+ HLH +AKLL+G
Sbjct: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFS-GHQISDAVPVSQHLHPTAKLLAG 64

Query: 63  HLYFLIPTDSAPEAEEKPKKAVRFAVPEK-ETGEGEISGGRAIRIKVVMTKKELEEMIEN 122
           HLYFLIPT++   AE+KPKK VRFA  EK E+GE     GR +RIK+VMTKKEL+EM+E 
Sbjct: 65  HLYFLIPTEA---AEKKPKKTVRFADSEKEESGENGGGTGRVVRIKLVMTKKELQEMVER 124

Query: 123 GGIWGDEMMSKIKS-SGEISCRDELEKEELQRWKPALESIPETEIDC 168
           GGI GDEM+ KIKS SGEISC  ELE+ E QRWKPAL+SIPE+E+ C
Sbjct: 125 GGISGDEMVCKIKSGSGEISC-TELEEAEEQRWKPALQSIPESEVAC 166

[Close]

BLAST of MS011202 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.1e-55
Identity = 121/175 (69.14%), Postives = 138/175 (78.86%), Query Frame = 0


Query: 3   NCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLLSG 62
           NCLFV+ KPIRIMK+DGKILEYKSPTRVFQVLSDFS GH I+DAVPVTHHLH +AKLLSG
Sbjct: 5   NCLFVDHKPIRIMKTDGKILEYKSPTRVFQVLSDFS-GHEISDAVPVTHHLHRTAKLLSG 64

Query: 63  HLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISGGRAIRIKVVMTKKELEEMIENG 122
           HLYFLIP +     E+KPKKAVRFA PEKET     +GG  +RIKVVMTKKEL+EM+E G
Sbjct: 65  HLYFLIPKE---PHEKKPKKAVRFAEPEKETASA-TTGGGVVRIKVVMTKKELQEMVERG 124

Query: 123 GIWGDEMMSKIKSS-GEISCRDELEKE---------ELQRWKPALESIPETEIDC 168
           GI  +EM+ KIK+  GEIS R E+E+E         ELQRWKP LESIPE+E+ C
Sbjct: 125 GISAEEMICKIKNGRGEISSRSEMEEEEEEEEDEESELQRWKPVLESIPESEVAC 174

[Close]

BLAST of MS011202 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 5.8e-25
Identity = 65/177 (36.72%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL +E+K I+IM++DGK++EY+ P +V  +L+ FS  +++ D++    HLH  AKLL
Sbjct: 1   MGNCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLL 60

Query: 61  SGHLYFLIPTD-SAPEAEEKPKKAVRFAVPEKETGEGE------------ISGGRAIRIK 120
            G LY+L+P + ++ +  +K  K VRFA PE E  E E                  +R+K
Sbjct: 61  CGRLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVK 120

Query: 121 VVMTKKELEEMIENGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPETE 165
           +V++K+ELE++++ G +   EM+ +  +   + C D+ E  + + W+P L+SIPET+
Sbjct: 121 MVVSKQELEKLLQGGSV--HEMVYRTLAKQHL-CDDDDECHK-EGWRPLLDSIPETD 173

[Close]

BLAST of MS011202 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 4.6e-22
Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 0


Query: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60
           MGNCL +E+K I+I++ DGK+LEY+ P  V  +L+ FS GH+I+       HL   AKLL
Sbjct: 1   MGNCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFS-GHSISHN---NTHLLPDAKLL 60

Query: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGE-------------GEISGG-----R 120
           SG LY+L+PT      ++K  K V FA PE E  E               I G       
Sbjct: 61  SGRLYYLLPTTM---TKKKVNKKVTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVT 120

Query: 121 AIRIKVVMTKKELEEMIENGGIWGDEMMSKIKSSGEISCRDELEKEELQRWKPALESIPE 165
            +R+K+V+ K+ELE++++ G +  + M   ++    ++  D+ + E    W+PAL+SIPE
Sbjct: 121 VVRMKIVVHKQELEKLLQGGSV-HEMMYQTLEKQLLLTSSDDDDLECNSGWRPALDSIPE 174

[Close]

BLAST of MS011202 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0


Query: 1  MGNCLF------VEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVT-HHL 60
          MGNCLF       E+  I+++KSDG +LE+ SP     V   FS GHA+  AV +    L
Sbjct: 1  MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFS-GHALFSAVDLLWKPL 60

Query: 61 HHSAKLLSGHLYFLIP 70
           H   L+ G  Y+L P
Sbjct: 61 AHDHLLVPGQSYYLFP 75

[Close]

BLAST of MS011202 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.6e-05
Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 90  EKETGEGEISGGRAIRIKVVMTKKELEEMI--ENGGIWGDEMMSKIKSSG---EISCRDE 149
           E+E+        + +RIKVV+TKKEL +++  +NG     +++  +K SG    ++  +E
Sbjct: 38  EEESERSTEEESKVVRIKVVVTKKELRQILGHKNGINSIQQLVHVLKDSGRNISMASYEE 97

Query: 150 LEKEE-LQRWKPALESIPET 164
            EKEE  + W+P LESIPE+
Sbjct: 98  DEKEEGDENWRPTLESIPES 117

The following BLAST results are available for this feature:

BLAST of MS011202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133156.1	5.3e-89	100.00	uncharacterized protein LOC111005826 [Momordica charantia]	[more]
XP_022972617.1	8.3e-58	72.09	uncharacterized protein LOC111471158 [Cucurbita maxima]	[more]
XP_038882971.1	2.7e-56	73.37	uncharacterized protein LOC120074056 [Benincasa hispida]	[more]
XP_022962863.1	3.5e-56	69.54	uncharacterized protein LOC111463230 [Cucurbita moschata]	[more]
KAG7027198.1	1.0e-55	72.62	hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MS011202 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS011202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BU81	2.6e-89	100.00	uncharacterized protein LOC111005826 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1I5B2	4.0e-58	72.09	uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158...	[more]
A0A6J1HG15	1.7e-56	69.54	uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1IRC0	2.4e-55	72.46	uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765...	[more]
A0A1S3CHA7	4.1e-55	69.14	uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=...	[more]

BLAST of MS011202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10120.1	5.8e-25	36.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G03890.1	4.6e-22	36.81	unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel...	[more]
AT1G64700.1	1.0e-05	40.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G21680.1	8.6e-05	37.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..162 e-value: 3.4E-17 score: 63.4
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..163
None	No IPR available	PANTHER	PTHR33148:SF46	EXPRESSED PROTEIN	coord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011202.1	MS011202.1	mRNA