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MS011100 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAGGTACGAATGGCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGGTAAGATTTATTCACCTAAATACTGGAATCAGTCTGTCCTTTTATTATGTACGGTTGGTCGTGAAGATTTGTGTTTAATCATGTATTCTCAAGATTCTTGTTTTCTGTTGTTGGTCTTTCTTGTAACAAGAGTAATTAACTGTTCTATTTCTTACCTTTCTTATAAGCATCAATTTTGTTCAATATGGGAAAGATGCAAAATGATCAGAACAACCTCTACATCTTAGGAAAGATACAAAATGGCAAGAACAACATAACTCCATATGAGCATGCCCAAAATTACTCTACCTCCATGTCTTCTTCCGCCCTAACTTGTTACTACACGTTTCTAAGCATTCTGCAGCCTCCACGTTTTCCCAAACTCTTTTGCTCAATAGTGTTCCTTATTCATATTCTATCTCCCCCTTTCCAAACCGATTCCTCAATAGCACTTGCCGCACTTGAGCCCTCTTCCATCTTATTCTTTGACAGAGTTTGATTCAATTATATTGTCACCATAGTCCTATGAGTTTCAATAATGCTACTAAGATATAAGCTACATCTTGTGTGAGAAGCTCCATGGTACATTCTAATTATGGTAGTTGCTTTAGTTCTTACATTTCTCCGGAATCCTCCACAACTTTGATCCCCTCGTTTAGTTTCTGGTTATAGAGGGTATGGTTTGGTATGCCAATTGCCATCTTTACATCCTCATGGTTTCTGGTTATATAACTCAATTATTTATTGATGATACGTCTTATGGGAACTTTAATTTCAGACTCAAAATCCCTCATTCTTCCTGTCTATAAATTTATTAGTTTTTATGTTAAATGTTAAAATATTTCTGAGGAATCTGGAAACCTCGAACCAGCTTAATATAAAGGTCTCTCTATGGTAGTTAGCCTCCTTCCTAACCCTTGGTCATTAAAAAATCACTATAACTCTACCTCTGACTATTCAACTTAACAAATCATTCTAACTGTACCTCTGATTAGGTCTTTTTATGGTAACGTTCTTTCTTTTGAGTTTTGAACAAGGATACTACTTCGTGTTTGTTGGCAACTTGGCATGGATATTGTATTTGTGTTCGTTCTTATTGTTTTCTTCTCTGCACTTTTCGTTGTACGGCATGAAATTGACTTCCCTTCTCCTCTTCTTTTCGTTTTCCTGCGTGTGATCACATATTTAAGGAAATTCTATTGCGTACAGGTTCAACACAATTGAATCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCGCTAGTAAACACGAACCAGATCCTGCATTTCTTGCTGAGGCGAAAGCTGGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGAT TTGAAGGTACGAATGGCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACAATTGAATCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCGCTAGTAAACACGAACCAGATCCTGCATTTCTTGCTGAGGCGAAAGCTGGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGAT TTGAAGGTACGAATGGCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACAATTGAATCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCGCTAGTAAACACGAACCAGATCCTGCATTTCTTGCTGAGGCGAAAGCTGGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGAT LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQANKKED Homology
BLAST of MS011100 vs. NCBI nr
Match: XP_022146488.1 (uncharacterized protein LOC111015696 [Momordica charantia] >XP_022146489.1 uncharacterized protein LOC111015696 [Momordica charantia] >XP_022146490.1 uncharacterized protein LOC111015696 [Momordica charantia] >XP_022146492.1 uncharacterized protein LOC111015696 [Momordica charantia]) HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of MS011100 vs. NCBI nr
Match: XP_038882777.1 (protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 177.6 bits (449), Expect = 6.0e-41 Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of MS011100 vs. NCBI nr
Match: XP_022926009.1 (uncharacterized protein LOC111433255 [Cucurbita moschata] >XP_022926010.1 uncharacterized protein LOC111433255 [Cucurbita moschata] >XP_023543189.1 uncharacterized protein LOC111803138 [Cucurbita pepo subsp. pepo] >KAG7034797.1 hypothetical protein SDJN02_04529 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of MS011100 vs. NCBI nr
Match: XP_022977993.1 (uncharacterized protein LOC111478118 [Cucurbita maxima] >XP_022977994.1 uncharacterized protein LOC111478118 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of MS011100 vs. NCBI nr
Match: XP_004134542.1 (uncharacterized protein LOC101206493 [Cucumis sativus] >XP_011658340.1 uncharacterized protein LOC101206493 [Cucumis sativus] >KAE8647778.1 hypothetical protein Csa_003577 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39 Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of MS011100 vs. ExPASy TrEMBL
Match: A0A6J1CYA2 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Momordica charantia OX=3673 GN=LOC111015696 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of MS011100 vs. ExPASy TrEMBL
Match: A0A6J1EJT7 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucurbita moschata OX=3662 GN=LOC111433255 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.5e-41 Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of MS011100 vs. ExPASy TrEMBL
Match: A0A0A0KPB7 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G526400 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40 Identity = 95/110 (86.36%), Postives = 101/110 (91.82%), Query Frame = 0
BLAST of MS011100 vs. ExPASy TrEMBL
Match: A0A6J1ISV9 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucurbita maxima OX=3661 GN=LOC111478118 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.5e-40 Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of MS011100 vs. ExPASy TrEMBL
Match: A0A5A7UE48 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010040 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39 Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of MS011100 vs. TAIR 10
Match: AT1G05780.1 (Vacuolar ATPase assembly integral membrane protein VMA21-like domain ) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-30 Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of MS011100 vs. TAIR 10
Match: AT2G31710.1 (Vacuolar ATPase assembly integral membrane protein VMA21-like domain ) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28 Identity = 63/105 (60.00%), Postives = 81/105 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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