MS011092 (gene) Bitter gourd (TR) v1

Overview


Name	MS011092
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Vacuolar protein sorting-associated protein 2-like protein 2
Location	scaffold35: 4360636 .. 4362185 (-)
RNA-Seq Expression	MS011092
Synteny	MS011092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACAGGCTGCAACCAGAATCCTAGCTCGACAGCTTGTTCGTCTACGTCAACAGATAACAAATTTGCAAGGGAGTCGTGCCCAAATTAGAGGTGTAGCTACTCATACCCAGGTCAGCATCCTAACCGTGAAACCTATTGGCCCTTTTTTTTAGTTCAGTGAAAATGTTAGCCGCTTCTTGTTTTTCCAGGCATTATATGCTAGCACTTCAATCTCTACCGGCATGAAAGGTGCTACAAAAGCAATGGTTGCAATGAACAAGGTAAGCACCCCGAAGAGTATATGATACCTTAAATTTATATTATACTCTTTTTTAAAAGAAAGAATGACACACATGGAGAGAAGTTTGTTATACTATAATCTCGGTTGTTGCATAATTTTTAGTCGACATAATTGATGAAGTTTGTTGTGATAAAGTAAAATTCAAGTTTCACTATTTGTTTGGTTGTTGTGTTCGGATATCATATTTATACCCAAATGATCAATTGTATCATCTTTTGCAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATAAAGGAGTTCCAGAAGCAGTCGGCGCAGTTGGACATGACGGTAACACTTCCAGTTTCACTATTTTTTCTTGTTTTAACAGATATTAAATGCTATACTGTCGCCCGGGCAAGGGAGAATTAACCAAAGTAAACTTCCTGTTTTGAGAAAGATATCTGAAAGGCAAGAAAAGGGATGCTAGAATCTTTGTATATCACGAGGCTTAGTTAGATACTGGGGAAACACCCCCTCATTTTAGAGTCATAATGTAGGACAGGACTTTCACGGAGTAACTTCAAAGGCGCTCTAATTTACATTCCTTCCCAGTTAAATAATTATATTGTACTGTATCTATGAGAAACATCGTAAGAGAGAGAGAGGGGGAAAGAGATTTTACTTGGACTAAATTTGAATTGTACCCATCATCTTACACAAACTCCTTATTTCGTTACACGAGTATAGTATACTTACTCCACATTCAAAAATCTCATGCTGCCACTTGTCTAGATATTAATTTTTTTTAGAATTCCAAACTAGCCTTTGTAGTATTGGAAGCAAAACCTCCCACAATCCTCAGAGCTAGTGGATTTTGCATTTTTTATACTCATACAGTATGTTTTCTACTTTTTCTTTTCTCCAGATTGAAATGATGTCAGAGTCTATCGATGAAACTTTAGATAAAGATGAGGCAGAAGAGGAAACTGAAGAGCTTACTAATCAGGTAAATTTTTACAACATATTTAAGGTTGCATCTCTTGATCGTAATTCATATCATATTCCAGAATTTTACCAATTAGAGTATTCGTATTTTGTTATTTTTTATAGGTGCTTGATGAGATCGGTGTAGATATTGCATCACAGGTTGGTCTCTTGACAATGAACGCTTTGCTTGAATTTAAAATCTCTGTCCTGTTTTCATCCTTCCTTTTATCATTATGAAAAGTTTATTGCTGTCTGACGTCGACTTTTCTTGTTACAGTTATCGTCTGCACCCAAAGGCCGGATTGCAGCGAGAAAGACTGAAAATACTGTTACCAGG

mRNA sequence

TTACAGGCTGCAACCAGAATCCTAGCTCGACAGCTTGTTCGTCTACGTCAACAGATAACAAATTTGCAAGGGAGTCGTGCCCAAATTAGAGGTGTAGCTACTCATACCCAGGCATTATATGCTAGCACTTCAATCTCTACCGGCATGAAAGGTGCTACAAAAGCAATGGTTGCAATGAACAAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATAAAGGAGTTCCAGAAGCAGTCGGCGCAGTTGGACATGACGATTGAAATGATGTCAGAGTCTATCGATGAAACTTTAGATAAAGATGAGGCAGAAGAGGAAACTGAAGAGCTTACTAATCAGGTGCTTGATGAGATCGGTGTAGATATTGCATCACAGTTATCGTCTGCACCCAAAGGCCGGATTGCAGCGAGAAAGACTGAAAATACTGTTACCAGG

Coding sequence (CDS)

TTACAGGCTGCAACCAGAATCCTAGCTCGACAGCTTGTTCGTCTACGTCAACAGATAACAAATTTGCAAGGGAGTCGTGCCCAAATTAGAGGTGTAGCTACTCATACCCAGGCATTATATGCTAGCACTTCAATCTCTACCGGCATGAAAGGTGCTACAAAAGCAATGGTTGCAATGAACAAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATAAAGGAGTTCCAGAAGCAGTCGGCGCAGTTGGACATGACGATTGAAATGATGTCAGAGTCTATCGATGAAACTTTAGATAAAGATGAGGCAGAAGAGGAAACTGAAGAGCTTACTAATCAGGTGCTTGATGAGATCGGTGTAGATATTGCATCACAGTTATCGTCTGCACCCAAAGGCCGGATTGCAGCGAGAAAGACTGAAAATACTGTTACCAGG

Protein sequence

LQAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTVTR

Homology

[Close]

BLAST of MS011092 vs. NCBI nr
Match: XP_022146601.1 (vacuolar protein sorting-associated protein 2 homolog 2 [Momordica charantia] >XP_022146602.1 vacuolar protein sorting-associated protein 2 homolog 2 [Momordica charantia])

HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTVT 144
           ASQLSSAPKGRIAARKTENTVT
Sbjct: 177 ASQLSSAPKGRIAARKTENTVT 198

[Close]

BLAST of MS011092 vs. NCBI nr
Match: KAA0052452.1 (vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 122 EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 181

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 182 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 241

Query: 122 ASQLSSAPKGRIAARKTENTVTR 145
           ASQLSSAPKGRIAARKTENTV R
Sbjct: 242 ASQLSSAPKGRIAARKTENTVAR 264

[Close]

BLAST of MS011092 vs. NCBI nr
Match: XP_008439501.1 (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 2 isoform X1 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 177 ASQLSSAPKGRIAARKTENTV 197

[Close]

BLAST of MS011092 vs. NCBI nr
Match: XP_008439502.1 (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 2 isoform X2 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 177 ASQLSSAPKGRIAARKTENTV 197

[Close]

BLAST of MS011092 vs. NCBI nr
Match: KGN49499.1 (hypothetical protein Csa_003398 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 177 ASQLSSAPKGRIAARKTENTV 197

[Close]

BLAST of MS011092 vs. ExPASy Swiss-Prot
Match: Q0WTY4 (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS2.2 PE=1 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-56
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAP KQAKVIK+FQKQSAQLDMTIEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 174

Query: 122 ASQLSSAPKGRIAAR 137
           ASQLSSAPKGRIA +
Sbjct: 175 ASQLSSAPKGRIATK 189

[Close]

BLAST of MS011092 vs. ExPASy Swiss-Prot
Match: Q941D5 (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=VPS2.3 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-49
Identity = 104/139 (74.82%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           + AT+ILARQL+RLRQQI NLQGSRAQ+RG+ATHTQA++A TS++ GM+GATKAM AM+K
Sbjct: 55  EGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSK 114

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
            M PAKQAKV++EFQKQSAQ+DMT EMMS+SID+ LD DEAE+ETE+LTNQVLDEIG+DI
Sbjct: 115 NMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDI 174

Query: 122 ASQLSSAPKGRIAARKTEN 141
           ASQLSSAPKG+I  +K E+
Sbjct: 175 ASQLSSAPKGKIGGKKAED 193

[Close]

BLAST of MS011092 vs. ExPASy Swiss-Prot
Match: Q9SKI2 (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21
Identity = 57/141 (40.43%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 4   ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQM 63
           A +++A+ L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM
Sbjct: 59  AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 118

Query: 64  APAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 123
                 K+++EF++Q+ +++M  E+M ++ID+ L+ DE EEETE+L +QVLDEIG+DI  
Sbjct: 119 NLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQ 178

Query: 124 QLSSAPKGRIAARKTENTVTR 145
           +L +AP G +A    +N V +
Sbjct: 179 ELVNAPSGAVAVPAAKNKVVQ 199

[Close]

BLAST of MS011092 vs. ExPASy Swiss-Prot
Match: Q54DB1 (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=44689 GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 52/126 (41.27%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 4   ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQM 63
           + +I+A+ LVR R  I      + Q++ V+   Q L ++ +++  MKG TKAM+ MN+QM
Sbjct: 57  SAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQM 116

Query: 64  APAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 123
              +  K++ EF++QS ++DM  EMM++++D+ +++D  EE+++E+ NQVLDEIG+D+AS
Sbjct: 117 NLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLAS 176

Query: 124 QLSSAP 130
           QL  AP
Sbjct: 177 QLVDAP 182

[Close]

BLAST of MS011092 vs. ExPASy Swiss-Prot
Match: Q6NXD2 (Charged multivesicular body protein 2b OS=Danio rerio OX=7955 GN=chmp2b PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.4e-18
Identity = 53/140 (37.86%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 4   ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQM 63
           A ++LA+QLV++R+Q T      +++  ++T T+ + +   ++  M   TK M A+NK+M
Sbjct: 57  ACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKM 116

Query: 64  APAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 123
            P K  + ++ FQK++A++DMT EMM++++DE  +    EEE++++ NQVLDEIG++I+ 
Sbjct: 117 DPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISG 176

Query: 124 QLSSAPKGRIAARKTENTVT 144
           +++ AP    AARKT +  T
Sbjct: 177 KMAHAPS---AARKTPSAAT 193

[Close]

BLAST of MS011092 vs. ExPASy TrEMBL
Match: A0A6J1D013 (vacuolar protein sorting-associated protein 2 homolog 2 OS=Momordica charantia OX=3673 GN=LOC111015763 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTVT 144
           ASQLSSAPKGRIAARKTENTVT
Sbjct: 177 ASQLSSAPKGRIAARKTENTVT 198

[Close]

BLAST of MS011092 vs. ExPASy TrEMBL
Match: A0A5A7U9M7 (Vacuolar protein sorting-associated protein 2-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00490 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 122 EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 181

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 182 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 241

Query: 122 ASQLSSAPKGRIAARKTENTVTR 145
           ASQLSSAPKGRIAARKTENTV R
Sbjct: 242 ASQLSSAPKGRIAARKTENTVAR 264

[Close]

BLAST of MS011092 vs. ExPASy TrEMBL
Match: A0A5D3CNH2 (Vacuolar protein sorting-associated protein 2-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009980 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 122 EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 181

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 182 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 241

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 242 ASQLSSAPKGRIAARKTENTV 262

[Close]

BLAST of MS011092 vs. ExPASy TrEMBL
Match: A0A0A0KL14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526330 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 177 ASQLSSAPKGRIAARKTENTV 197

[Close]

BLAST of MS011092 vs. ExPASy TrEMBL
Match: A0A1S3AYV7 (vacuolar protein sorting-associated protein 2 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484281 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 57  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 116

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 117 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 176

Query: 122 ASQLSSAPKGRIAARKTENTV 143
           ASQLSSAPKGRIAARKTENTV
Sbjct: 177 ASQLSSAPKGRIAARKTENTV 197

[Close]

BLAST of MS011092 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein )

HSP 1 Score: 220.3 bits (560), Expect = 9.9e-58
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAP KQAKVIK+FQKQSAQLDMTIEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 174

Query: 122 ASQLSSAPKGRIAAR 137
           ASQLSSAPKGRIA +
Sbjct: 175 ASQLSSAPKGRIATK 189

[Close]

BLAST of MS011092 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein )

HSP 1 Score: 220.3 bits (560), Expect = 9.9e-58
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           +AAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 35  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 94

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
           QMAP KQAKVIK+FQKQSAQLDMTIEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 95  QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 154

Query: 122 ASQLSSAPKGRIAAR 137
           ASQLSSAPKGRIA +
Sbjct: 155 ASQLSSAPKGRIATK 169

[Close]

BLAST of MS011092 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 )

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-50
Identity = 104/139 (74.82%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 2   QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 61
           + AT+ILARQL+RLRQQI NLQGSRAQ+RG+ATHTQA++A TS++ GM+GATKAM AM+K
Sbjct: 55  EGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSK 114

Query: 62  QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 121
            M PAKQAKV++EFQKQSAQ+DMT EMMS+SID+ LD DEAE+ETE+LTNQVLDEIG+DI
Sbjct: 115 NMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDI 174

Query: 122 ASQLSSAPKGRIAARKTEN 141
           ASQLSSAPKG+I  +K E+
Sbjct: 175 ASQLSSAPKGKIGGKKAED 193

[Close]

BLAST of MS011092 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 57/141 (40.43%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 4   ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQM 63
           A +++A+ L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+QM
Sbjct: 59  AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 118

Query: 64  APAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 123
                 K+++EF++Q+ +++M  E+M ++ID+ L+ DE EEETE+L +QVLDEIG+DI  
Sbjct: 119 NLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQ 178

Query: 124 QLSSAPKGRIAARKTENTVTR 145
           +L +AP G +A    +N V +
Sbjct: 179 ELVNAPSGAVAVPAAKNKVVQ 199

[Close]

BLAST of MS011092 vs. TAIR 10
Match: AT3G45000.1 (SNF7 family protein )

HSP 1 Score: 44.3 bits (103), Expect = 9.7e-05
Identity = 36/137 (26.28%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 6   RILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAP 65
           + LAR++V  R+ +  L  ++AQ+  ++ H     A+      +  + + M  +N  M  
Sbjct: 34  KALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMKLVNSLMKA 93

Query: 66  AKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 125
            + A  ++ F K+  +  +  E +S+++D  LD ++ EEE EE  ++VL  I  + A++L
Sbjct: 94  PEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEEEIEEEVDKVLTAIAGETAAEL 153

Query: 126 SSA---PKGRIAARKTE 140
             A    K  + A+K E
Sbjct: 154 PEAVRKQKMNVPAQKAE 170

The following BLAST results are available for this feature:

BLAST of MS011092 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146601.1	4.8e-62	99.30	vacuolar protein sorting-associated protein 2 homolog 2 [Momordica charantia] >X...	[more]
KAA0052452.1	4.8e-62	98.60	vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. ...	[more]
XP_008439501.1	1.4e-61	99.29	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 2 isoform X1 [C...	[more]
XP_008439502.1	1.4e-61	99.29	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 2 isoform X2 [C...	[more]
KGN49499.1	1.4e-61	99.29	hypothetical protein Csa_003398 [Cucumis sativus]	[more]

BLAST of MS011092 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTY4	1.4e-56	91.11	Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana ...	[more]
Q941D5	2.8e-49	74.82	Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana ...	[more]
Q9SKI2	2.5e-21	40.43	Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana ...	[more]
Q54DB1	3.0e-19	41.27	Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=...	[more]
Q6NXD2	4.4e-18	37.86	Charged multivesicular body protein 2b OS=Danio rerio OX=7955 GN=chmp2b PE=2 SV=...	[more]

BLAST of MS011092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D013	2.3e-62	99.30	vacuolar protein sorting-associated protein 2 homolog 2 OS=Momordica charantia O...	[more]
A0A5A7U9M7	2.3e-62	98.60	Vacuolar protein sorting-associated protein 2-like protein 2 OS=Cucumis melo var...	[more]
A0A5D3CNH2	6.7e-62	99.29	Vacuolar protein sorting-associated protein 2-like protein 2 isoform X1 OS=Cucum...	[more]
A0A0A0KL14	6.7e-62	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526330 PE=4 SV=1	[more]
A0A1S3AYV7	6.7e-62	99.29	vacuolar protein sorting-associated protein 2 homolog 2 isoform X2 OS=Cucumis me...	[more]

BLAST of MS011092 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44560.1	9.9e-58	91.11	SNF7 family protein	[more]
AT5G44560.2	9.9e-58	91.11	SNF7 family protein	[more]
AT1G03950.1	2.0e-50	74.82	vacuolar protein sorting-associated protein 2.3	[more]
AT2G06530.1	1.8e-22	40.43	SNF7 family protein	[more]
AT3G45000.1	9.7e-05	26.28	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..112
None	No IPR available	GENE3D	6.10.140.1230		coord: 2..128 e-value: 9.5E-40 score: 138.3
None	No IPR available	PANTHER	PTHR10476:SF48	BNAA08G30490D PROTEIN	coord: 2..141
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 2..141
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 4..132 e-value: 3.1E-26 score: 92.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011092.1	MS011092.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport