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MS011073 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCGATGATTCCGATCAAAATAGCGGCGGCGATGGCCGTTTGCCTGCCGTTAATCGTGGCGGTCCTCGCCGTCAAAACGACGGCGCTGGAGATTCGGCCGTCGGAGCACGGGCTGGAGTTTCAGAGCCCTCCCCCGGCGGGAGACAAATCGTCGCCGGAGATGCTGTCGTTCTTTGGAGGAAGATCATCGCCGACACCGGATGCCGCATTGCCGTTGCCGAAGGCGATGAATTCGAGCGAGGCGCCGGGATGGTGGACCCGCCGTGACGGTGGAGATACGCGCCTTAGAAACGCATTATTGGTGGCGACGGCGGCGTTTGGAATAACAGGTGTCACTTTACTAGTGGGTTCTGTGCTATTCTACGTTTATAAGGTCAAGAACCAAAGATCATTGCCATTATCTTCCAACAATAATCACAAG CCGATGATTCCGATCAAAATAGCGGCGGCGATGGCCGTTTGCCTGCCGTTAATCGTGGCGGTCCTCGCCGTCAAAACGACGGCGCTGGAGATTCGGCCGTCGGAGCACGGGCTGGAGTTTCAGAGCCCTCCCCCGGCGGGAGACAAATCGTCGCCGGAGATGCTGTCGTTCTTTGGAGGAAGATCATCGCCGACACCGGATGCCGCATTGCCGTTGCCGAAGGCGATGAATTCGAGCGAGGCGCCGGGATGGTGGACCCGCCGTGACGGTGGAGATACGCGCCTTAGAAACGCATTATTGGTGGCGACGGCGGCGTTTGGAATAACAGGTGTCACTTTACTAGTGGGTTCTGTGCTATTCTACGTTTATAAGGTCAAGAACCAAAGATCATTGCCATTATCTTCCAACAATAATCACAAG CCGATGATTCCGATCAAAATAGCGGCGGCGATGGCCGTTTGCCTGCCGTTAATCGTGGCGGTCCTCGCCGTCAAAACGACGGCGCTGGAGATTCGGCCGTCGGAGCACGGGCTGGAGTTTCAGAGCCCTCCCCCGGCGGGAGACAAATCGTCGCCGGAGATGCTGTCGTTCTTTGGAGGAAGATCATCGCCGACACCGGATGCCGCATTGCCGTTGCCGAAGGCGATGAATTCGAGCGAGGCGCCGGGATGGTGGACCCGCCGTGACGGTGGAGATACGCGCCTTAGAAACGCATTATTGGTGGCGACGGCGGCGTTTGGAATAACAGGTGTCACTTTACTAGTGGGTTCTGTGCTATTCTACGTTTATAAGGTCAAGAACCAAAGATCATTGCCATTATCTTCCAACAATAATCACAAG PMIPIKIAAAMAVCLPLIVAVLAVKTTALEIRPSEHGLEFQSPPPAGDKSSPEMLSFFGGRSSPTPDAALPLPKAMNSSEAPGWWTRRDGGDTRLRNALLVATAAFGITGVTLLVGSVLFYVYKVKNQRSLPLSSNNNHK Homology
BLAST of MS011073 vs. NCBI nr
Match: XP_022146536.1 (uncharacterized protein LOC111015729 [Momordica charantia]) HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of MS011073 vs. NCBI nr
Match: XP_022925668.1 (uncharacterized protein LOC111433017 [Cucurbita moschata]) HSP 1 Score: 208.8 bits (530), Expect = 3.1e-50 Identity = 112/139 (80.58%), Postives = 118/139 (84.89%), Query Frame = 0
BLAST of MS011073 vs. NCBI nr
Match: XP_023518243.1 (uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 6.9e-50 Identity = 115/140 (82.14%), Postives = 120/140 (85.71%), Query Frame = 0
BLAST of MS011073 vs. NCBI nr
Match: XP_023003567.1 (uncharacterized protein LOC111497130 [Cucurbita maxima]) HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49 Identity = 112/138 (81.16%), Postives = 119/138 (86.23%), Query Frame = 0
BLAST of MS011073 vs. NCBI nr
Match: XP_022926736.1 (uncharacterized protein LOC111433768 [Cucurbita moschata]) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48 Identity = 114/140 (81.43%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of MS011073 vs. ExPASy TrEMBL
Match: A0A6J1CZN3 (uncharacterized protein LOC111015729 OS=Momordica charantia OX=3673 GN=LOC111015729 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.6e-68 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of MS011073 vs. ExPASy TrEMBL
Match: A0A6J1EFW4 (uncharacterized protein LOC111433017 OS=Cucurbita moschata OX=3662 GN=LOC111433017 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50 Identity = 112/139 (80.58%), Postives = 118/139 (84.89%), Query Frame = 0
BLAST of MS011073 vs. ExPASy TrEMBL
Match: A0A6J1KMY3 (uncharacterized protein LOC111497130 OS=Cucurbita maxima OX=3661 GN=LOC111497130 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 9.8e-50 Identity = 112/138 (81.16%), Postives = 119/138 (86.23%), Query Frame = 0
BLAST of MS011073 vs. ExPASy TrEMBL
Match: A0A6J1EFQ9 (uncharacterized protein LOC111433768 OS=Cucurbita moschata OX=3662 GN=LOC111433768 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.9e-49 Identity = 114/140 (81.43%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of MS011073 vs. ExPASy TrEMBL
Match: A0A0A0KM65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525480 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 8.6e-46 Identity = 99/139 (71.22%), Postives = 113/139 (81.29%), Query Frame = 0
BLAST of MS011073 vs. TAIR 10
Match: AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09 Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 0
BLAST of MS011073 vs. TAIR 10
Match: AT1G30515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06 Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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