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MS011072 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCAGGTATGGTGGAGTTCATTGGATTATTGAAGGTCAAAGTGATTAAAGGGACAGACTTAGCTATCAGGGACATGATGTCGAGTGACCCTTATGTTGTTTTGACTCTTGGACAACAGGTTGGTAGTTTGCCCTTAATCATTTCTTCCAAACAGGCTCTTTGTTCTCGTTGTCCATTTATTTGTAAATTGTTGCCATAAATTGGGATTATGTCAGCAAGTAATGATAAGTTCGTTCCAACCGTAATAGGGCTAGGCTAGGTTGGGCTAGAAGGGTTTCTTAATTGTCTTCTTTTTTCTTCTCATCAGAGTTCAAAACTGAACGTGAAACATTGGTTTCATCCGACTAATTCCTTTATTCCATCGCCTTGATATAGATGATAACATCATGCCTTTCTTTTTTTTTACCCTGTTATGTTAGACTGTTCAGACAACTATAGTCAAGAGCAACTTAAATCCTGTGTGGAATGAGGATCTCATGCTATCTGTACCTCAATGTTTTGGGACCTTAAAGTTGGTAAGTCTTTCTTAAGCTCTTTTTTTTGGACTCCACTGTTCAACTATGCATATTAATCTTAATAAAATGACTGAAGTTTCCCATTGATTAGTTTACTTACGATTTGGAAATCTTTCTTTTTGTCTATAATAAGAAAGCAACATTTTGTATGATATAGTTTTGTCTTTTTTTATTTGCTTGCCAACTGAAGAACTTTTCTGACTAATCATAACTCCATGCTCGCTTCTGCTGGTAATGTACCTGGCATCTTGTTCGAGTTGCTGAGTGTGTTTCTAGCAACTTTTCTAATGTGTGATGCCAGATCTAGCATACATACAAATACATCTTGTTAATATTTATAAAGTTATGCCATGTATGCCAATTGCACGACAGAAATGCTAGAGAAAGAAATCTGGTAAACTTTAAGGTTTGATAGATTTATTTGTTTGCCTAGGTTTTCCTGTGGAAATTATGATTGCCATGACTTGGCTGATCATTTTTCCTTTCTTGGTTGATGAATAACTGTGGTCTACGGAAAAGTTCGATGCCTCCCTTTTTTATGCTTGTTGCATAGGAGTTTTGTAGTGATTATCCTGTCTCTTATTTTCGTTAAAATAAAAAACTAATCTGATAATCAACAGTACAATTCTGAAAATACTGCTGGTTATTTATATGGCTTTTCTACTCGTTTCCATATTGCAGCAAGTATACGATTATGACACATTTTCAGCAGACGACATAATGGGAGAAGCAGAAATTGATCTTCAGCCCTTAATAACATCCGCAATGGCATTTGGAGATGCTGGATTGTTTTCAAATATGCAAATTGGAAAATGGCTGAAATCACACGATAATGCTCTCATAACCGATAGTACTGTTAATATTGTTGATGGCAAGGTGAAGCAAGAGATATCACTCAAGCTTCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGCCTCTTGAACAA GCAGGTATGGTGGAGTTCATTGGATTATTGAAGGTCAAAGTGATTAAAGGGACAGACTTAGCTATCAGGGACATGATGTCGAGTGACCCTTATGTTGTTTTGACTCTTGGACAACAGACTGTTCAGACAACTATAGTCAAGAGCAACTTAAATCCTGTGTGGAATGAGGATCTCATGCTATCTGTACCTCAATGTTTTGGGACCTTAAAGTTGCAAGTATACGATTATGACACATTTTCAGCAGACGACATAATGGGAGAAGCAGAAATTGATCTTCAGCCCTTAATAACATCCGCAATGGCATTTGGAGATGCTGGATTGTTTTCAAATATGCAAATTGGAAAATGGCTGAAATCACACGATAATGCTCTCATAACCGATAGTACTGTTAATATTGTTGATGGCAAGGTGAAGCAAGAGATATCACTCAAGCTTCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGCCTCTTGAACAA GCAGGTATGGTGGAGTTCATTGGATTATTGAAGGTCAAAGTGATTAAAGGGACAGACTTAGCTATCAGGGACATGATGTCGAGTGACCCTTATGTTGTTTTGACTCTTGGACAACAGACTGTTCAGACAACTATAGTCAAGAGCAACTTAAATCCTGTGTGGAATGAGGATCTCATGCTATCTGTACCTCAATGTTTTGGGACCTTAAAGTTGCAAGTATACGATTATGACACATTTTCAGCAGACGACATAATGGGAGAAGCAGAAATTGATCTTCAGCCCTTAATAACATCCGCAATGGCATTTGGAGATGCTGGATTGTTTTCAAATATGCAAATTGGAAAATGGCTGAAATCACACGATAATGCTCTCATAACCGATAGTACTGTTAATATTGTTGATGGCAAGGTGAAGCAAGAGATATCACTCAAGCTTCAGAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGCCTCTTGAACAA AGMVEFIGLLKVKVIKGTDLAIRDMMSSDPYVVLTLGQQTVQTTIVKSNLNPVWNEDLMLSVPQCFGTLKLQVYDYDTFSADDIMGEAEIDLQPLITSAMAFGDAGLFSNMQIGKWLKSHDNALITDSTVNIVDGKVKQEISLKLQNVESGELDLELEWMPLEQ Homology
BLAST of MS011072 vs. NCBI nr
Match: XP_022146534.1 (ADP-ribosylation factor GTPase-activating protein AGD12-like [Momordica charantia] >XP_022146535.1 ADP-ribosylation factor GTPase-activating protein AGD12-like [Momordica charantia]) HSP 1 Score: 324.3 bits (830), Expect = 6.0e-85 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of MS011072 vs. NCBI nr
Match: XP_023003564.1 (ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucurbita maxima] >XP_023003566.1 ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucurbita maxima]) HSP 1 Score: 304.3 bits (778), Expect = 6.4e-79 Identity = 152/163 (93.25%), Postives = 160/163 (98.16%), Query Frame = 0
BLAST of MS011072 vs. NCBI nr
Match: KAG6594424.1 (ADP-ribosylation factor GTPase-activating protein AGD12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78 Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. NCBI nr
Match: XP_022926731.1 (ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucurbita moschata] >XP_022926732.1 ADP-ribosylation factor GTPase-activating protein AGD12-like [Cucurbita moschata]) HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78 Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. NCBI nr
Match: KAG7026422.1 (putative ADP-ribosylation factor GTPase-activating protein AGD13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 302.0 bits (772), Expect = 3.2e-78 Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. ExPASy Swiss-Prot
Match: Q9FVJ3 (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana OX=3702 GN=AGD12 PE=1 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 2.7e-72 Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0
BLAST of MS011072 vs. ExPASy Swiss-Prot
Match: Q8LFN9 (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana OX=3702 GN=AGD13 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70 Identity = 127/163 (77.91%), Postives = 149/163 (91.41%), Query Frame = 0
BLAST of MS011072 vs. ExPASy Swiss-Prot
Match: Q8L7A4 (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana OX=3702 GN=AGD11 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.8e-53 Identity = 97/164 (59.15%), Postives = 133/164 (81.10%), Query Frame = 0
BLAST of MS011072 vs. ExPASy Swiss-Prot
Match: A2X479 (GTPase activating protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07012 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.1e-32 Identity = 65/156 (41.67%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of MS011072 vs. ExPASy Swiss-Prot
Match: Q6YWF1 (GTPase activating protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GAP1 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.1e-32 Identity = 65/156 (41.67%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of MS011072 vs. ExPASy TrEMBL
Match: A0A6J1CXH8 (ADP-ribosylation factor GTPase-activating protein AGD12-like OS=Momordica charantia OX=3673 GN=LOC111015728 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.9e-85 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of MS011072 vs. ExPASy TrEMBL
Match: A0A6J1KTP1 (ADP-ribosylation factor GTPase-activating protein AGD12-like OS=Cucurbita maxima OX=3661 GN=LOC111497129 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 3.1e-79 Identity = 152/163 (93.25%), Postives = 160/163 (98.16%), Query Frame = 0
BLAST of MS011072 vs. ExPASy TrEMBL
Match: A0A6J1EF74 (ADP-ribosylation factor GTPase-activating protein AGD12-like OS=Cucurbita moschata OX=3662 GN=LOC111433766 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78 Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. ExPASy TrEMBL
Match: A0A2I4EE97 (ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108988811 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77 Identity = 145/163 (88.96%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. ExPASy TrEMBL
Match: A0A2I4EEA8 (ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108988811 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77 Identity = 145/163 (88.96%), Postives = 159/163 (97.55%), Query Frame = 0
BLAST of MS011072 vs. TAIR 10
Match: AT4G21160.1 (Calcium-dependent ARF-type GTPase activating protein family ) HSP 1 Score: 272.7 bits (696), Expect = 1.9e-73 Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0
BLAST of MS011072 vs. TAIR 10
Match: AT4G21160.3 (Calcium-dependent ARF-type GTPase activating protein family ) HSP 1 Score: 272.7 bits (696), Expect = 1.9e-73 Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0
BLAST of MS011072 vs. TAIR 10
Match: AT4G21160.2 (Calcium-dependent ARF-type GTPase activating protein family ) HSP 1 Score: 272.7 bits (696), Expect = 1.9e-73 Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0
BLAST of MS011072 vs. TAIR 10
Match: AT4G21160.4 (Calcium-dependent ARF-type GTPase activating protein family ) HSP 1 Score: 272.7 bits (696), Expect = 1.9e-73 Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0
BLAST of MS011072 vs. TAIR 10
Match: AT4G05330.1 (ARF-GAP domain 13 ) HSP 1 Score: 267.3 bits (682), Expect = 8.1e-72 Identity = 127/163 (77.91%), Postives = 149/163 (91.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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