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MS011070 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTGGTTGTCCAGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGTACTATATTCAAACTATTCTCTCTCTCTCTTTTACTTTTCTTAATCCCTTTGTGGAACTTGGTTTGCAAAAGCTCTGCTCAAGCCTTATTATTCATTCATTTGTTTTTTTTTTTAATTTCTTTTTCTGAAAAAAGAAACAAATTTTTTGTGAATATAGTAAATAGTTAGAAGTAGGTTGTACGAAGAAAGGAACAGAAAAACTTCCTACTCCCAGGTTATCTTATGATATGGTTTACCATATCAAGAAGGGTTTTTTAATATCATTACTATGTTATTACTTTTTTTTTTTTTTTTAATGAAACCGTCTACCTTTTGGTAACTTGAAAAATAGTAATGCATATTTTTGTAATATTTTCCTATAGTTTGGTTTGAAAGAAACTGAAATATTTTTTATGGTATTGGAAGGGCTAGAGAGAAATTTTTGAATGATATTTCCTCTTTTCACATCTGATTATTCTAGTATTTCCAAGGTTTTTGGTAACTATTCCATTTCTTCAATTTTAGCCAGTTGGGAAGTACTTTCTTAACCCTTGTTATGGGACTTTTTTCTCCCTTTGTCTCACTTTTTAACGTTTCATTTATGCAATAAAATTGGTTTATCTGGTTTGGATTTTTTTTTATCTGATAAATGCTATGAATTACACATGATGTACTTATTATTTACATTTTAAAAGATAAAAAATTCAATATGCAATTTTTATGAACAATAACTATAATTCACAGTAATGCATTTTTAGTCTGAAGTATTTAAAAGTATATAATGTGATAAAATAATTTTCAATAATGTTCTCCTGACGTATGACTCGTCTTGTAAATAAAGTTTCGTGAAAGAAAGTTAATTCACCAAACATATAGAATTAAAATCAATAATTTGAATTTACGTAATTATATATATCTTATTCATTCCTTTATTATGTGGCTTACACACCATAAAGTTTAATTATATATTTTGCACTATATGGTAAAAAATTAAATATGTTATATGTAACGATAAATTTAGCTTCCTATATTAATAGCAAATAATTGCCTTTTCCAGTTTAGAAAATGATATGTATGTTTTTATCAATGCAATTGATAAATATTCCTTTTCTTTTATCCAATTGGTGAAGTTTTTTGTAACTCCCTTGAATTGGGATCCTCCCCACCTTTTATAATTCCACACTATCAATGAAATTGTTTCTTATAAAAAAAATTATATGTATGTTTATCTTGATATTATCTAACCAAGAGTTCTTTCTAAAGCGTAGAGGCACTAGTGCATTTTTCAATAAATAAATTCAGCAGAGGCACACAAAAATAAAAATAAAATTGATAATTTAATATATGATTAACATAGTATCATGAAGCATGGGATAATGGAAAACAAAAGCAATAATGCTTTATTTAGATATTATTCAAAGAAGTAGGCATAGATTCACTTTTGAGAGCAATGCATATAATATAACTAATATATTTTTCTATAAGAATTTCATTATCAAGGAGATCTAGTTACAAAAGAAGGGGAAAAGCAATCTCCAAAGAGCCAACGGTACAAAAAAGACTTTCATTTGGCATTAAAATTCACAACATTGTAGTTACAAAACATCTTGTAAATTAGACACAAAGATGACACAAAGAACGAACTTCCCGAAACACAGTGCCGAAGATTCTTTGCCTTTGAAAACTCTTTGATTCCTTTCAAACCACATTCACTGAACAGTTTATAAAATTTATTATTAGTTACCATTATATAATACGTTATATAACTATTATTAGTTACTAATGTTTATAAAATTTATTATATTACAAGATAAGACACAATGAGAAATGTGATGTGGCATGTTTTTGGTAGTACAGTAGTTTTTGAAAGAGAGCAGGGCTTTTTTGTGTGGGGATCTTAATCCATAGCAATTGCTGAAGTCCGATGGCTTAAGTTTCATGTCCTTGCATGCGTGCTTGGAGGTTGGGGGACTTCTTGTGGACTTTATCTAGTTTTTCACTCTCTCGCTCTCTCCCTATATATATAATAAAAAATGGAATAAGAAACGAACAATTTTCAGCGAGAGCCCGACTTCTCCAAAGCTAAGCCTCCCGCCATTATCTATTTAAAAAAAAAAAGTGTTGTGGACCTTATCTAACCTAGGAATATGGTTTCGTTGTTTTTGGCTCCTGTAAAATTATTTCCCTAGTCTGCTCTTTTATTAATGAAGCTTCAGAATGATTTCACTTTATCTTCTTTTGTAAGTGCCATTAGTATCGCATCCTACCCTCTGCTTCAATTTTTTAATATCCGAAAGACCTTGCTAGAAACAGAAGTGTGTAATTCTGCTCTATTTCTTCTCATTTGCAATTAGTTTTTCTACAGATGTGTAACCAAAATACATACAATATGATTGACATTCAAACAATTCTTGTCAGTTGCAATCTGAATGTGGAAACTGTATACTTAGTAACAAAGTTTCGGTGGATGCAGTGTTAATTCTAAGCCTAATGTAGGAAGTGGGTAATTATGACCAGGTTTTTGTAGAGACGTGTATGTTTTAGGGAGGGTGTCATGAGAGAGAGAGAGAGCCTACTTTCATTTGGCAGTATATTCATAATCAGTTCCTGTTCTACTTCTAGAGGATTGTATTCACTTCTAGTTATATAAAGATGGATGGTTGATAGAAATCATGTTTTGCCTTTAATCCACCTAATTTATGCATGATGTAACGTTTCACTTTAGTCACTGTCACTTTCCACCGGAGACAATGATCTTTCATCTACCCTAATATGAGCATAATTTGATATGTTCTTGATCTTGGCCATACTCACCATAATTTGTGTTTAAATAAATGAATTCTTGGTCTCTGTCCACGGGAAACAAAAGTTGGTGAGATTGAGAGTTTTTTCTGACCATTATAATGGTTGGGACAGTTGCTGATTTTAATTGGACATTTGCAGTTATGATGGTGTTTTTTTAAGTGGTTGTTTCCCTTTTCTAGACAAAGAATCTAGTTTTTAGTTTTACTATTTGTTATTAATGGCTTTATTTGGAGCTTATTTAACTAATTTGGATTTCTGGAACTTCTCTGGTGAAGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTAGTTTTTTATTTTTCAATAATGTCGATAATTTTGGCTGACATTTTGAATAGAGACATCAAGTAATGTTGGTGAGAATTGATCAAGGAATGGTAAACCTTCCTCCTTTTGGAGAACGTTGAATTTTTCTGTTCAAAATTTTTGACCCTACAGGCTGGGGGTAGAGGGTACCCCGCCTGAAAAACTACAATTGTCTGTTTCTTATAATATTTTTTTATAAAGAGAGCGATTTTATCTTTCCTATCATGTTCTCCCTGAAAAAGAAGAGGTAAAAAAACCAGAAAAATAGTTTATAAAGAGAACACTAAATGGGAGTAAAGAATTTGGTGCATTTTTTTTCCTCTTTAAAGATCACAATTGTTGATTCTAATGAAAAACAGGAATCGTGAAAGAGTCCTCTTTGAATAAAATGATAGAAGCAACATACAGCCTGGAAGGGTATAATTATTTTGTTAACTTTGGAGAATACGATAACTCGCTGTAGATACATGGATCGTAGGCTTTCTAAAACCATAAAGAAATGAAAGCTTAATTTATCAGATTATTTTATCTATATGATTTATAACTTGCTGATTTTGATATATTGGTTTGTTTTACCTTTTTTAGTCATTACTTGATTTCTTGTGTATTGCTCATTTTAGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGGTATGCAAGCACAACTATTACCCCAGTGTTAAATACTGCGTGTGCATAATTGTATTTGTGATAGGCCTCCCGTAGTATATACTATAAAAGAAGGGGCAAAAATGGTCTAGGTAGGTGTCTAGGGGGAAAAATGGTATAGGTAGGTGTCAGGTAGTTAGACGAAAGAGCTGATTCTGTTAATTGAAGTGTGACGTGAGATGAAGTATTAGCATTGTACTAAGTGGTGGTAGTTGTGGTAGTCCTCCCCACCCTTTTTACTCTTTCTATCAGAAGTTCAGAACCTATCAAATTGGGGAGGGGGGTGGGTGGTGAGAAAGACTTCTTGGTTAGCTTTCCTTTCATGTTGCTTCATTCTTTGGATTTTGACTGCTTCGCTTCAATATATTGTGCAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAAC ACTGGTTGTCCAGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAAC ACTGGTTGTCCAGATAATGGTGAGGCTGATGAGCAGCAAAAGTACTCAGAATCTCAGAATCATTCTTTATCTGTCATAAATGGACTGAATCAACCCAGCATCCCAACCCCAAATCAGTATGTAACACCTCCACAAGTTGGCGCAGGACATGCTATGGCACCCCCAGCTTATCCATATCCAGATCCTTACTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTTCAACTAATGGGAATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAACAGTATCATGGCATTTTACGACGTCGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTTTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAAAGAAAATCAACAAAATGAAGTGGCATCAGGTGGTAAATCTCAGCCCAATATAAATCTGAATTCTGATAAAAGTGATCTTGCTTCTTCAGAGAAC TGCPDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNEVASGGKSQPNINLNSDKSDLASSEN Homology
BLAST of MS011070 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia]) HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of MS011070 vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96 Identity = 183/196 (93.37%), Postives = 188/196 (95.92%), Query Frame = 0
BLAST of MS011070 vs. NCBI nr
Match: XP_022977923.1 (nuclear transcription factor Y subunit A-7 [Cucurbita maxima] >XP_022977924.1 nuclear transcription factor Y subunit A-7 [Cucurbita maxima]) HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96 Identity = 183/196 (93.37%), Postives = 188/196 (95.92%), Query Frame = 0
BLAST of MS011070 vs. NCBI nr
Match: KAG6581472.1 (Nuclear transcription factor Y subunit A-7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034763.1 Nuclear transcription factor Y subunit A-7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360.5 bits (924), Expect = 9.2e-96 Identity = 182/196 (92.86%), Postives = 187/196 (95.41%), Query Frame = 0
BLAST of MS011070 vs. NCBI nr
Match: XP_038883162.1 (nuclear transcription factor Y subunit A-7-like [Benincasa hispida]) HSP 1 Score: 358.2 bits (918), Expect = 4.5e-95 Identity = 183/196 (93.37%), Postives = 186/196 (94.90%), Query Frame = 0
BLAST of MS011070 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46 Identity = 113/194 (58.25%), Postives = 138/194 (71.13%), Query Frame = 0
BLAST of MS011070 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39 Identity = 104/199 (52.26%), Postives = 131/199 (65.83%), Query Frame = 0
BLAST of MS011070 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.7e-25 Identity = 86/202 (42.57%), Postives = 111/202 (54.95%), Query Frame = 0
BLAST of MS011070 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.7e-25 Identity = 81/184 (44.02%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of MS011070 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.7e-24 Identity = 62/114 (54.39%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of MS011070 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.8e-104 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of MS011070 vs. ExPASy TrEMBL
Match: A0A6J1IRJ2 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111478068 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96 Identity = 183/196 (93.37%), Postives = 188/196 (95.92%), Query Frame = 0
BLAST of MS011070 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96 Identity = 183/196 (93.37%), Postives = 188/196 (95.92%), Query Frame = 0
BLAST of MS011070 vs. ExPASy TrEMBL
Match: A0A5D3CPM7 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009570 PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 8.4e-95 Identity = 183/196 (93.37%), Postives = 186/196 (94.90%), Query Frame = 0
BLAST of MS011070 vs. ExPASy TrEMBL
Match: A0A6J1KNN1 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111497281 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94 Identity = 182/196 (92.86%), Postives = 188/196 (95.92%), Query Frame = 0
BLAST of MS011070 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 ) HSP 1 Score: 185.7 bits (470), Expect = 3.8e-47 Identity = 113/194 (58.25%), Postives = 138/194 (71.13%), Query Frame = 0
BLAST of MS011070 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 ) HSP 1 Score: 176.0 bits (445), Expect = 3.0e-44 Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = 0
BLAST of MS011070 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 ) HSP 1 Score: 164.5 bits (415), Expect = 9.0e-41 Identity = 104/199 (52.26%), Postives = 131/199 (65.83%), Query Frame = 0
BLAST of MS011070 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 ) HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26 Identity = 81/184 (44.02%), Postives = 101/184 (54.89%), Query Frame = 0
BLAST of MS011070 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 ) HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26 Identity = 86/202 (42.57%), Postives = 111/202 (54.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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