![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS011067 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAGATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTTTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAGATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAGATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS Homology
BLAST of MS011067 vs. NCBI nr
Match: XP_002882705.1 (60S ribosomal protein L37a-1 [Arabidopsis lyrata subsp. lyrata] >EFH58964.1 60S ribosomal protein L37a [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22 Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of MS011067 vs. NCBI nr
Match: KAG7576786.1 (Ribosomal protein L37ae, partial [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 114.8 bits (286), Expect = 3.9e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. NCBI nr
Match: XP_002268650.1 (PREDICTED: 60S ribosomal protein L37a [Vitis vinifera]) HSP 1 Score: 114.8 bits (286), Expect = 3.9e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. NCBI nr
Match: Q9XHE4.1 (RecName: Full=60S ribosomal protein L37a [Gossypium hirsutum] >AAD28753.1 60S ribosomal protein L37a [Gossypium hirsutum]) HSP 1 Score: 114.4 bits (285), Expect = 5.1e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. NCBI nr
Match: XP_010055398.1 (60S ribosomal protein L37a [Eucalyptus grandis] >KCW71856.1 hypothetical protein EUGRSUZ_E00333 [Eucalyptus grandis]) HSP 1 Score: 114.0 bits (284), Expect = 6.7e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.7e-25 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 9.7e-24 Identity = 64/92 (69.57%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 9.7e-24 Identity = 64/92 (69.57%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-23 Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of MS011067 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.2e-23 Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of MS011067 vs. ExPASy TrEMBL
Match: D7L9S8 (60S ribosomal protein L37a OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_897293 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22 Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of MS011067 vs. ExPASy TrEMBL
Match: F6GVD3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01000 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy TrEMBL
Match: A0A1U8I345 (60S ribosomal protein L37a-like OS=Gossypium hirsutum OX=3635 GN=LOC107890629 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy TrEMBL
Match: A0A1U7XSD1 (60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.3e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. ExPASy TrEMBL
Match: A0A6J1ICH2 (60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.3e-22 Identity = 67/92 (72.83%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS011067 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24 Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of MS011067 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-23 Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|