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MS011052 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCGTCAAAATCACCTCCTTCTTGCTACGGCTCACCATGCGCTGCCTGCAACTATCTGAGAAGAAAGTGCTTTTCAGATTGCGTTTTTGCGCCACATTTTCCCGCCGATGACGCTGAAAAATTCGAAATCGCGTGCAGAACTTATGGCGCCAGTAACATCTTCAAGATTTTCAGCCGACTCCGCCACGACGAGCGCGACGAGGCCGCGGCGTCTCTCGTCTACGAGGCGGAGGCTCGCCGGATCGATCCTGTGTACGGCTGCGTCGGTTTCATATCGATTCTTGACGACAGGCTTAAACGGATTCAATCCGATCTCGTTGATGCCAAGAGAGAGCTCTCGATTTACTTAGGATCGGAA ATGAGTTCGTCAAAATCACCTCCTTCTTGCTACGGCTCACCATGCGCTGCCTGCAACTATCTGAGAAGAAAGTGCTTTTCAGATTGCGTTTTTGCGCCACATTTTCCCGCCGATGACGCTGAAAAATTCGAAATCGCGTGCAGAACTTATGGCGCCAGTAACATCTTCAAGATTTTCAGCCGACTCCGCCACGACGAGCGCGACGAGGCCGCGGCGTCTCTCGTCTACGAGGCGGAGGCTCGCCGGATCGATCCTGTGTACGGCTGCGTCGGTTTCATATCGATTCTTGACGACAGGCTTAAACGGATTCAATCCGATCTCGTTGATGCCAAGAGAGAGCTCTCGATTTACTTAGGATCGGAA ATGAGTTCGTCAAAATCACCTCCTTCTTGCTACGGCTCACCATGCGCTGCCTGCAACTATCTGAGAAGAAAGTGCTTTTCAGATTGCGTTTTTGCGCCACATTTTCCCGCCGATGACGCTGAAAAATTCGAAATCGCGTGCAGAACTTATGGCGCCAGTAACATCTTCAAGATTTTCAGCCGACTCCGCCACGACGAGCGCGACGAGGCCGCGGCGTCTCTCGTCTACGAGGCGGAGGCTCGCCGGATCGATCCTGTGTACGGCTGCGTCGGTTTCATATCGATTCTTGACGACAGGCTTAAACGGATTCAATCCGATCTCGTTGATGCCAAGAGAGAGCTCTCGATTTACTTAGGATCGGAA MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKRELSIYLGSE Homology
BLAST of MS011052 vs. NCBI nr
Match: XP_022146502.1 (LOB domain-containing protein 36-like [Momordica charantia]) HSP 1 Score: 250.4 bits (638), Expect = 8.1e-63 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS011052 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]) HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33 Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of MS011052 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]) HSP 1 Score: 149.1 bits (375), Expect = 2.5e-32 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of MS011052 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]) HSP 1 Score: 149.1 bits (375), Expect = 2.5e-32 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of MS011052 vs. NCBI nr
Match: MBA0772010.1 (hypothetical protein [Gossypium trilobum]) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30 Identity = 66/113 (58.41%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of MS011052 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30 Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of MS011052 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.3e-28 Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of MS011052 vs. ExPASy Swiss-Prot
Match: O64836 (LOB domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=LBD10 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.9e-28 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of MS011052 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.8e-28 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of MS011052 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27 Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 0
BLAST of MS011052 vs. ExPASy TrEMBL
Match: A0A6J1CZR4 (LOB domain-containing protein 36-like OS=Momordica charantia OX=3673 GN=LOC111015703 PE=3 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 3.9e-63 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS011052 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of MS011052 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of MS011052 vs. ExPASy TrEMBL
Match: A0A7J9EG51 (LOB domain-containing protein OS=Gossypium trilobum OX=34281 GN=Gotri_007454 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 8.8e-31 Identity = 66/113 (58.41%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of MS011052 vs. ExPASy TrEMBL
Match: A0A6P3ZHR4 (LOB domain-containing protein 36-like OS=Ziziphus jujuba OX=326968 GN=LOC107414165 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.4e-30 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of MS011052 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 ) HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31 Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of MS011052 vs. TAIR 10
Match: AT2G23660.1 (LOB domain-containing protein 10 ) HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of MS011052 vs. TAIR 10
Match: AT2G23660.2 (LOB domain-containing protein 10 ) HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of MS011052 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27 Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of MS011052 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27 Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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