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MS011038 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATTCCCGTTTAGCGAGGTTCGTTACCGAGGTTGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGAGAGAGACAGTGGGAAGAATGACTGTGCTACTTCCCCAAGAAGCCCGTCAACTGTCTCTGCTTCTACAGCTGCTAGCGCCAGTTCTAGGTACTTCGTTAGAAATATAAATAGATCTTTCTCCACATTCAATGAT ATGGCGAATTCCCGTTTAGCGAGGTTCGTTACCGAGGTTGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGAGAGAGACAGTGGGAAGAATGACTGTGCTACTTCCCCAAGAAGCCCGTCAACTGTCTCTGCTTCTACAGCTGCTAGCGCCAGTTCTAGGTACTTCGTTAGAAATATAAATAGATCTTTCTCCACATTCAATGAT ATGGCGAATTCCCGTTTAGCGAGGTTCGTTACCGAGGTTGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGAGAGAGACAGTGGGAAGAATGACTGTGCTACTTCCCCAAGAAGCCCGTCAACTGTCTCTGCTTCTACAGCTGCTAGCGCCAGTTCTAGGTACTTCGTTAGAAATATAAATAGATCTTTCTCCACATTCAATGAT MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPRSPSTVSASTAASASSRYFVRNINRSFSTFND Homology
BLAST of MS011038 vs. NCBI nr
Match: KAG6594447.1 (hypothetical protein SDJN03_11000, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-20 Identity = 63/83 (75.90%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of MS011038 vs. NCBI nr
Match: KAA0052524.1 (hypothetical protein E6C27_scaffold120G001250 [Cucumis melo var. makuwa] >TYK13301.1 hypothetical protein E5676_scaffold255G009220 [Cucumis melo var. makuwa]) HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of MS011038 vs. NCBI nr
Match: KGN49420.1 (hypothetical protein Csa_003492 [Cucumis sativus]) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of MS011038 vs. NCBI nr
Match: XP_025013214.1 (uncharacterized protein LOC8284058 [Ricinus communis] >EEF42610.1 conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13 Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of MS011038 vs. NCBI nr
Match: KAG7034740.1 (hypothetical protein SDJN02_04470, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 83.6 bits (205), Expect = 8.7e-13 Identity = 50/67 (74.63%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of MS011038 vs. ExPASy TrEMBL
Match: A0A5D3CN92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009220 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.7e-19 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of MS011038 vs. ExPASy TrEMBL
Match: A0A0A0KI68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524100 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.7e-18 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of MS011038 vs. ExPASy TrEMBL
Match: A0A7N2LPW5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.5e-14 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of MS011038 vs. ExPASy TrEMBL
Match: B9S0W8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0630180 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13 Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of MS011038 vs. ExPASy TrEMBL
Match: M5WKN5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G084800 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.2e-13 Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of MS011038 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 7.9e-12 Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of MS011038 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein ) HSP 1 Score: 48.1 bits (113), Expect = 3.8e-06 Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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