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MS011031 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCGGAATCCCACAAGCTCCAGAACATACCTTCTTTCAAGCTGTCCCGGTACTCCTCCGGCGCACGCGACTCCGACGCCGGCGACGACCTCCGCTACATCAGCCTCAAAGACATCCTCCTGAACTCCCCCTCCTACAGCGGCGTCAACGACTTCAACGACTTCAATTCCTCCAACATCTCCATTCGGAATGAGCTCGTCAAGCGCGCCGCCTCCGCCTACCTCCAATCGGCGGCCATCCTCGTCAGCCGCAACGAAAGCTGCTTCGTCAGCTTCTGGGAACGCCTCCGGAACAAACTCGCCGCCCTCCGCTCCCGCTGGTGGGATTGCTTTCACCACGTTTTTGGATTCTTTACTTTTGCCCTAGAC ATTTCGGAATCCCACAAGCTCCAGAACATACCTTCTTTCAAGCTGTCCCGGTACTCCTCCGGCGCACGCGACTCCGACGCCGGCGACGACCTCCGCTACATCAGCCTCAAAGACATCCTCCTGAACTCCCCCTCCTACAGCGGCGTCAACGACTTCAACGACTTCAATTCCTCCAACATCTCCATTCGGAATGAGCTCGTCAAGCGCGCCGCCTCCGCCTACCTCCAATCGGCGGCCATCCTCGTCAGCCGCAACGAAAGCTGCTTCGTCAGCTTCTGGGAACGCCTCCGGAACAAACTCGCCGCCCTCCGCTCCCGCTGGTGGGATTGCTTTCACCACGTTTTTGGATTCTTTACTTTTGCCCTAGAC ATTTCGGAATCCCACAAGCTCCAGAACATACCTTCTTTCAAGCTGTCCCGGTACTCCTCCGGCGCACGCGACTCCGACGCCGGCGACGACCTCCGCTACATCAGCCTCAAAGACATCCTCCTGAACTCCCCCTCCTACAGCGGCGTCAACGACTTCAACGACTTCAATTCCTCCAACATCTCCATTCGGAATGAGCTCGTCAAGCGCGCCGCCTCCGCCTACCTCCAATCGGCGGCCATCCTCGTCAGCCGCAACGAAAGCTGCTTCGTCAGCTTCTGGGAACGCCTCCGGAACAAACTCGCCGCCCTCCGCTCCCGCTGGTGGGATTGCTTTCACCACGTTTTTGGATTCTTTACTTTTGCCCTAGAC ISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALRSRWWDCFHHVFGFFTFALD Homology
BLAST of MS011031 vs. NCBI nr
Match: KAA0052530.1 (putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa]) HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53 Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of MS011031 vs. NCBI nr
Match: XP_022146509.1 (uncharacterized protein LOC111015712 [Momordica charantia]) HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MS011031 vs. NCBI nr
Match: XP_022977989.1 (uncharacterized protein LOC111478115 [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of MS011031 vs. NCBI nr
Match: XP_023544918.1 (uncharacterized protein LOC111804374 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of MS011031 vs. NCBI nr
Match: XP_022925985.1 (uncharacterized protein LOC111433238 [Cucurbita moschata] >KAG6581442.1 hypothetical protein SDJN03_21444, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.3 bits (508), Expect = 9.7e-48 Identity = 100/120 (83.33%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of MS011031 vs. ExPASy TrEMBL
Match: A0A5A7UBK0 (Putative E3 ubiquitin-protein ligase arkadia-A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001310 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 9.8e-54 Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of MS011031 vs. ExPASy TrEMBL
Match: A0A0A0KKP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524030 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52 Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0
BLAST of MS011031 vs. ExPASy TrEMBL
Match: A0A6J1CYB8 (uncharacterized protein LOC111015712 OS=Momordica charantia OX=3673 GN=LOC111015712 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.0e-50 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MS011031 vs. ExPASy TrEMBL
Match: A0A6J1ISV4 (uncharacterized protein LOC111478115 OS=Cucurbita maxima OX=3661 GN=LOC111478115 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48 Identity = 101/121 (83.47%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of MS011031 vs. ExPASy TrEMBL
Match: A0A6J1EJR7 (uncharacterized protein LOC111433238 OS=Cucurbita moschata OX=3662 GN=LOC111433238 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.7e-48 Identity = 100/120 (83.33%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of MS011031 vs. TAIR 10
Match: AT4G18395.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 8.9e-07 Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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