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MS011025 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCGAAACTGCAACCTGGAACTTCGCCTCTCTCCCTCCGCCGCCGTCGCCGCCGCAGCCACCGCCGGAGAGGAGGCAAACGGCGGCCTGCAGAATCAACAGCTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACGGAGATTCAGGTACCGGCTCTATGGCTACAACTCACGTTTCTTTTATTTTTTTTACCCTTTTTACCTTCTTTTTCACTGTGGTAAATAGTAAATAATGGCACGAAACTTTCGTGCACTAAATAGTCTATTTCTGGGAAGCCCACGTGGCGGGAGGGGATTGGGGTTACCGTGAGTCTGTGAGCGCGTGGGCCACACGACACCGGCAGCTTGCATCTGTTTTCATCGTTGGGCCGACACCGCGTTCTTCCTTTGTTGACTTGTCATTTTCACCCACTTTCACTTAACATTCGCTTCGCTTTGTACCCAATTCTCTATAAACGGCCGAAAGAAAAACCCACGTTTTTTGTTTCTTTTTTTCTTTTTTTAATGTTAGGATAAGTACTTTTTCTTTTTTCTTTTTTTTTTAATGTTAGATAAATACTATTTTCGTTTCACTTTGTCGGCTATCAAAATATTTATTTTAATCATTATGCTTCCAAAATAATTAGTTTGATTTCTATTTATAAAATCTTAAAACAAATTTTATGGCTCAATTTCAATAAATTTAATGAGTAAAATATTAGACTAAAAATTAACGTTTCGAAAGTCGATATAGTAGTTTTAAAGTTGAAAATATAAGGAATAAAATAGTATTTTTTAATTTTTATTTTATTAGTCTACAAATTTATAGTTTTTTCATAAATTCTTTTTATATTGTTATTATTATATCATTTATTGAATTAATCCATATTTATGTTGATTAATATATCACAGAGAGATTATTGTATGATCATCTTCAATTTATTAGTTAGGAAGATAGTATCTTCATTTTTTTTAAATGAGTTTGATAAGATGTGAATTTAACATAAATTGATTAATGAAGATGTGAAATATTCAAAAGTATGTTGTTCATCCTCATTTATGAATATTATAGGCGAGAGCGATTTTAACACTGGCGACTAGAGAAATGGAAGAAAGGGGTCCAAAGGAACCACAACCATCTCAGGCAACAGTGTCGACGCCTAGCACGCCAATCACTCCAGGAATGTCGATGAAGAGATCGCTGCAAAGATTTCTGCAAAAGAGGAAGCATCGAGTCCAAGCGACTTCTCCGTATCACCTT ATGAGGCGAAACTGCAACCTGGAACTTCGCCTCTCTCCCTCCGCCGCCGTCGCCGCCGCAGCCACCGCCGGAGAGGAGGCAAACGGCGGCCTGCAGAATCAACAGCTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACGGAGATTCAGGCGAGAGCGATTTTAACACTGGCGACTAGAGAAATGGAAGAAAGGGGTCCAAAGGAACCACAACCATCTCAGGCAACAGTGTCGACGCCTAGCACGCCAATCACTCCAGGAATGTCGATGAAGAGATCGCTGCAAAGATTTCTGCAAAAGAGGAAGCATCGAGTCCAAGCGACTTCTCCGTATCACCTT ATGAGGCGAAACTGCAACCTGGAACTTCGCCTCTCTCCCTCCGCCGCCGTCGCCGCCGCAGCCACCGCCGGAGAGGAGGCAAACGGCGGCCTGCAGAATCAACAGCTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACGGAGATTCAGGCGAGAGCGATTTTAACACTGGCGACTAGAGAAATGGAAGAAAGGGGTCCAAAGGAACCACAACCATCTCAGGCAACAGTGTCGACGCCTAGCACGCCAATCACTCCAGGAATGTCGATGAAGAGATCGCTGCAAAGATTTCTGCAAAAGAGGAAGCATCGAGTCCAAGCGACTTCTCCGTATCACCTT MRRNCNLELRLSPSAAVAAAATAGEEANGGLQNQQLTIFYNGRICVCDVTEIQARAILTLATREMEERGPKEPQPSQATVSTPSTPITPGMSMKRSLQRFLQKRKHRVQATSPYHL Homology
BLAST of MS011025 vs. NCBI nr
Match: KAG7026459.1 (Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160.6 bits (405), Expect = 8.1e-36 Identity = 90/119 (75.63%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of MS011025 vs. NCBI nr
Match: KAG6594460.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 158.3 bits (399), Expect = 4.0e-35 Identity = 89/119 (74.79%), Postives = 95/119 (79.83%), Query Frame = 0
BLAST of MS011025 vs. NCBI nr
Match: XP_023003420.1 (protein TIFY 5A-like [Cucurbita maxima]) HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34 Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of MS011025 vs. NCBI nr
Match: XP_022926802.1 (protein TIFY 5A-like [Cucurbita moschata]) HSP 1 Score: 154.1 bits (388), Expect = 7.5e-34 Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0
BLAST of MS011025 vs. NCBI nr
Match: XP_023518591.1 (protein TIFY 5A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33 Identity = 83/116 (71.55%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of MS011025 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.3e-16 Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of MS011025 vs. ExPASy Swiss-Prot
Match: O64687 (Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12 Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of MS011025 vs. ExPASy Swiss-Prot
Match: F4J078 (Protein JAZ13 OS=Arabidopsis thaliana OX=3702 GN=JAZ13 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of MS011025 vs. ExPASy Swiss-Prot
Match: Q7XEZ1 (Protein TIFY 11d OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11D PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.0e-05 Identity = 42/107 (39.25%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of MS011025 vs. ExPASy Swiss-Prot
Match: A2Z6V9 (Protein TIFY 11d OS=Oryza sativa subsp. indica OX=39946 GN=TI11D PE=3 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.4e-05 Identity = 44/108 (40.74%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of MS011025 vs. ExPASy TrEMBL
Match: A0A6J1KRQ2 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111497036 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.6e-35 Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 0
BLAST of MS011025 vs. ExPASy TrEMBL
Match: A0A6J1EFE1 (protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111433812 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34 Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0
BLAST of MS011025 vs. ExPASy TrEMBL
Match: A0A1S3AZ71 (protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.1e-33 Identity = 85/122 (69.67%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of MS011025 vs. ExPASy TrEMBL
Match: A0A6J1EE47 (protein TIFY 5A OS=Cucurbita moschata OX=3662 GN=LOC111433321 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.4e-31 Identity = 79/119 (66.39%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS011025 vs. ExPASy TrEMBL
Match: A0A0A0KI51 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523460 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 8.4e-31 Identity = 84/124 (67.74%), Postives = 94/124 (75.81%), Query Frame = 0
BLAST of MS011025 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17 Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of MS011025 vs. TAIR 10
Match: AT2G34600.1 (jasmonate-zim-domain protein 7 ) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13 Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of MS011025 vs. TAIR 10
Match: AT3G22275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of MS011025 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 44.3 bits (103), Expect = 7.8e-05 Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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