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MS011013 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACAGCCAAACCATTCCAACAACGGAGAAGAAGAGGAAAATCAGGGCCGGGTTCAAACGGCGTCGTAATAGCAACAACAAGCCAAAGCCAACGCCAACGCCAACGGCCTTCTCTGTGATGCTTCCCAAGGGCTTCGTCCCGCCCTCTGGCCGTTCGTCTCCTTGCCACAACGAAATTCCACAATCTCTCGCTTTCTACTGCCATCTCTCTGCCTCC AACAGCCAAACCATTCCAACAACGGAGAAGAAGAGGAAAATCAGGGCCGGGTTCAAACGGCGTCGTAATAGCAACAACAAGCCAAAGCCAACGCCAACGCCAACGGCCTTCTCTGTGATGCTTCCCAAGGGCTTCGTCCCGCCCTCTGGCCGTTCGTCTCCTTGCCACAACGAAATTCCACAATCTCTCGCTTTCTACTGCCATCTCTCTGCCTCC AACAGCCAAACCATTCCAACAACGGAGAAGAAGAGGAAAATCAGGGCCGGGTTCAAACGGCGTCGTAATAGCAACAACAAGCCAAAGCCAACGCCAACGCCAACGGCCTTCTCTGTGATGCTTCCCAAGGGCTTCGTCCCGCCCTCTGGCCGTTCGTCTCCTTGCCACAACGAAATTCCACAATCTCTCGCTTTCTACTGCCATCTCTCTGCCTCC NSQTIPTTEKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS Homology
BLAST of MS011013 vs. NCBI nr
Match: KAG6581427.1 (hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.1 bits (170), Expect = 8.9e-09 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of MS011013 vs. NCBI nr
Match: KAG7034719.1 (hypothetical protein SDJN02_04449, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 68.9 bits (167), Expect = 2.0e-08 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of MS011013 vs. NCBI nr
Match: KAG7026467.1 (hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of MS011013 vs. NCBI nr
Match: KAG6594469.1 (hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of MS011013 vs. NCBI nr
Match: KAA0052545.1 (hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa] >TYK13280.1 hypothetical protein E5676_scaffold255G008990 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 7.5e-08 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of MS011013 vs. ExPASy TrEMBL
Match: A0A5A7UFQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008990 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.6e-08 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of MS011013 vs. ExPASy TrEMBL
Match: A0A0A0KIK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523350 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.9e-07 Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of MS011013 vs. ExPASy TrEMBL
Match: A0A7J6ER19 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_000048 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.0e-07 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of MS011013 vs. ExPASy TrEMBL
Match: A0A438JP87 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_018313 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06 Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of MS011013 vs. ExPASy TrEMBL
Match: A0A5N5ID33 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_027731 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06 Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of MS011013 vs. TAIR 10
Match: AT4G18335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 8.9e-07 Identity = 32/58 (55.17%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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