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MS011006 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTTTTGCAGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTCCCATCTGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTTTGGGCGACTAACGAAGTCCGCGCTAAATCCAAGTTTTGGTGAGTTTTTTCGTGTTTTTGTTTGATCACATTGTTTGAAGAGGATTACTATGTTTTTTGGTTTATCGATTAATAAAATCGATGCTCTACGCTTTCTTGATTTCACTGTTAGCTAAACCCTCCTTTGTTTGTCTTTCCTGCTCTGTGTTAGGTATTTTCTGCGGAAGCTGAAGAAAGTCAAGAAGATCAACGGTCAGGTGCTCGCTATCAATGAGGTAATGTGTGTTTGTCTCCTGTCCTCCCAGTTAGAACTGTACTAGATTTAATTGCTTGGGGTTACACCCTTTTGTCTGATTATTGGTTTAGGTGATGTTATGTTGGCTCACAGGTGAATACATTGTTATTTTCCAAGAAAGAATAGAGGCATTAGTGTTGAACTATTCCCCTTTTCCTTGTAACCCGTTACTGTGATTCCAATTTTTTCTGAACGATTATAACTTCTTGTTCAGTGCTCGTTTCAGTTCCTTTGTTTATCTATACAACCTTTGTTCTTTGAATGTAATAGTGAAAACTTCCATAGGGTTTTGATTCTCTTTCAGTGTTTGTTTGGTATGGCATCACCTTTAGTACTCGTGGAAGTATTGCTTTTGTAGTGAATATTTCATGAACATTGAATGGTGCTCCACGTTATTGCTGAATAACTTATGGTGGATGAGGAATTGTGGGGGGTTCTTTTGTGTTTATTTACTCTTGTCACTTGTGAATGGTATTTGGATTAACTGTACACTCTCTGTTCTATTAACTTTATTGGATATTGGATATTTTATTGGTTAAAGATTTTTAATGGTTTTTGAAATGCAAATATTATGATATGAGGGAAAAGGAAGTATCTACTATGTAAATGAATGCTTTTGATCTATCTATATGGTGGACCTTCTGGTGAGCTTAATACCAAAAACCTTTGATGTTTCCTGGTTCGGGTCTTTGGGTGGGCGCGGGTGCCCCTGGGTATATCGGAGCAAAGCTTCGACTCCCAGTATAACTATTGATTCTTGCCGGAACAAAATTTGACATGATTGTGGTTCTTACTTCCAAGTTTTTTTTTTAATAAGCATTTACTTAACAGGGTTGAGTTTCTGACCTATTTCTGGTTTGCTAAATTTTATCATAACACACTGAAACATCATTAGTTTTCTTTTTTAGTTAGGCTGTTCTCATTGAATTGTCATTGTCTGTAGATCTTTGAGAAGAATCCAACAAAGATCAAGAACTATGGTATTTGGTTGCGCTACCAAAGTCGTACAGGATATCACAACATGTACAAGGAATACCGCGACACCACCTTAAATGGAGCGGTGGAGGCAATGTACAACGAAATGGCTTCTCGCCATAGGGTCAGGTATCCTTGCATCCAAATCATCAAGACTGCGACTGTCCCTGCAAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCATGACTCCAAGATCAAGTTCCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTGTTTATG TTCTTTTTGCAGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTCCCATCTGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTTTGGGCGACTAACGAAGTCCGCGCTAAATCCAAGTTTTGGTATTTTCTGCGGAAGCTGAAGAAAGTCAAGAAGATCAACGGTCAGGTGCTCGCTATCAATGAGATCTTTGAGAAGAATCCAACAAAGATCAAGAACTATGGTATTTGGTTGCGCTACCAAAGTCGTACAGGATATCACAACATGTACAAGGAATACCGCGACACCACCTTAAATGGAGCGGTGGAGGCAATGTACAACGAAATGGCTTCTCGCCATAGGGTCAGGTATCCTTGCATCCAAATCATCAAGACTGCGACTGTCCCTGCAAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCATGACTCCAAGATCAAGTTCCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTGTTTATG TTCTTTTTGCAGTTCCACCAATACCAGGTTGTGGGAAGGGCTCTCCCATCTGAAGCAGATGAGCATCCCAAGATTTACCGAATGAAGCTTTGGGCGACTAACGAAGTCCGCGCTAAATCCAAGTTTTGGTATTTTCTGCGGAAGCTGAAGAAAGTCAAGAAGATCAACGGTCAGGTGCTCGCTATCAATGAGATCTTTGAGAAGAATCCAACAAAGATCAAGAACTATGGTATTTGGTTGCGCTACCAAAGTCGTACAGGATATCACAACATGTACAAGGAATACCGCGACACCACCTTAAATGGAGCGGTGGAGGCAATGTACAACGAAATGGCTTCTCGCCATAGGGTCAGGTATCCTTGCATCCAAATCATCAAGACTGCGACTGTCCCTGCAAAGCTTTGCAAGAGGGAAAGCACCAAGCAATTCCATGACTCCAAGATCAAGTTCCCCTTGGTGTTCAGGACTGTTAGGCCACCCACCAGAAAGCTGAAGACCACTTACAAGGCTTCAAGGCCCAATTTGTTTATG FFLQFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKINGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYNEMASRHRVRYPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFRTVRPPTRKLKTTYKASRPNLFM Homology
BLAST of MS011006 vs. NCBI nr
Match: XP_022146684.1 (60S ribosomal protein L18a-like [Momordica charantia]) HSP 1 Score: 355.5 bits (911), Expect = 2.6e-94 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MS011006 vs. NCBI nr
Match: XP_038880985.1 (60S ribosomal protein L18a [Benincasa hispida]) HSP 1 Score: 353.6 bits (906), Expect = 9.9e-94 Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MS011006 vs. NCBI nr
Match: XP_022157842.1 (60S ribosomal protein L18a [Momordica charantia]) HSP 1 Score: 351.7 bits (901), Expect = 3.8e-93 Identity = 169/174 (97.13%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MS011006 vs. NCBI nr
Match: XP_022926366.1 (60S ribosomal protein L18a-like [Cucurbita moschata]) HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92 Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of MS011006 vs. NCBI nr
Match: XP_004134633.1 (60S ribosomal protein L18a [Cucumis sativus] >KGN49388.1 hypothetical protein Csa_003074 [Cucumis sativus]) HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92 Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of MS011006 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.2e-89 Identity = 158/174 (90.80%), Postives = 166/174 (95.40%), Query Frame = 0
BLAST of MS011006 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2) HSP 1 Score: 326.6 bits (836), Expect = 1.7e-88 Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 0
BLAST of MS011006 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 8.4e-88 Identity = 155/174 (89.08%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of MS011006 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.2e-87 Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of MS011006 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.1e-86 Identity = 152/175 (86.86%), Postives = 164/175 (93.71%), Query Frame = 0
BLAST of MS011006 vs. ExPASy TrEMBL
Match: A0A6J1CYS9 (60S ribosomal protein L18a OS=Momordica charantia OX=3673 GN=LOC111015828 PE=3 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94 Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MS011006 vs. ExPASy TrEMBL
Match: A0A6J1DVK7 (60S ribosomal protein L18a OS=Momordica charantia OX=3673 GN=LOC111024455 PE=3 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93 Identity = 169/174 (97.13%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of MS011006 vs. ExPASy TrEMBL
Match: A0A6J1KRT5 (60S ribosomal protein L18a OS=Cucurbita maxima OX=3661 GN=LOC111496677 PE=3 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.3e-93 Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of MS011006 vs. ExPASy TrEMBL
Match: A0A0A0KIJ4 (60S ribosomal protein L18a OS=Cucumis sativus OX=3659 GN=Csa_6G522810 PE=3 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.3e-93 Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of MS011006 vs. ExPASy TrEMBL
Match: A0A6J1EEQ6 (60S ribosomal protein L18a-like OS=Cucurbita moschata OX=3662 GN=LOC111433535 PE=3 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 5.3e-93 Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of MS011006 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein ) HSP 1 Score: 326.6 bits (836), Expect = 1.2e-89 Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 0
BLAST of MS011006 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein ) HSP 1 Score: 324.3 bits (830), Expect = 6.0e-89 Identity = 155/174 (89.08%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of MS011006 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein ) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-87 Identity = 152/175 (86.86%), Postives = 164/175 (93.71%), Query Frame = 0
BLAST of MS011006 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 ) HSP 1 Score: 318.9 bits (816), Expect = 2.5e-87 Identity = 152/175 (86.86%), Postives = 163/175 (93.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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