![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS010984 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGAGGGGAAACGTGTGGCTGTCAAGTATTATTCAGATGAGTGGCCAACAAATAGTGCAAAGGAATCTTTTGAGAAAGCTGTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGGTAATCCGAAGTCCTATTGTTAGCTTCTGTGCTTTATAGAAATGTGTTACCATTTTGATCGTAATAACTCTAGAGACACTGTTTCTATTGGTGCTTTTTTTTACTTGTTCTTTTTTCTTTTCTTTTTTATAAGAAACAAAAGATTCATTGATCTATCAAAAAGGAGACAACCTAATGGCGGAGTGTTGAGAAAACCCTCTCCCAATAGCTATACAATGGAGGCCTTCCAATTTCTAACTATCATATGTAGGCTATAATTACAAAAGAATTTCTTGTGGTTTATAGACCACCATGAAGCAAAATGCTAAACATTGGAAGGCCCATGAAATTCCTAGCAGTAAAGTTACTTGTCCCATGTCTCTTTTATTTGACAATGAAGAAAGCAACACCATGAGCATACACTATGCAGTTTGGAAAGTAGTCTGATACCACCATATGATGTTAACTTGGTATATCTTCTCTATCTGCAGCGGAGATAGCAATGTTTGAAAACAATATTGTCGTTTACAAGTTTGTGCAAGACCTTCATTTTTTTGTCACTGGTGGAGAATATGAAAACGAGCTTATCTTGGCAACAGTACTTCAAGGATTCTTTGATGCTGTTGGCCTTCTTCTTAGGTCTTAACTCTAAGTCCCATACTTGTTACTGTTTCCTGGTTATAAAAAAAAAACAAAAACAAAAACAAAAACAAACAAAACAAAAAAGAAAAAGGAAAAAGGAAAAAAAAAAAACCCCTCTCACTGCATTTACTGTATTTCACTGCAAAGTTGCTGTCATAATTAATGTGTGTGGCTTCAACTTCAGGGGTCACGTGGAAAAGAAGGAAGCACTTGAAAACTTGGATCTTATTTTGTTGTGCCTCGATGAAATTGTTGATGGAGGGTATGGTTTAAGCTTATTTCATGCTTATTTAGCTTTATTGATCTTATCGTTCTGTATAGTTTTCTTGAGCTTTAAAGCATACCCTGTTTCTTAAAAGTGCAAAAGTTGTACTATGAATAGTTTTTTAATTTTGATTTTATTCATAACTTAGATTATGAAAAGTTGAACTATCAATACTCTATTTCTTAAAAATACAAAAGTTAATCTGTGAAGAATGATGTATACTTAAATAACCCGTCTTGGAGACATCTTACAAGGTTGTTTCATTTGGGTAAGATGTTAAATTAGTTGTTTTATGGACCATTAAGGGAAGTCAGTACAAGAGGCGCAATCTCCCTCCATCAGTATGATGTAAACATAGTAATGAGATGAAAAACCTCCCATCATGAGTCTGATACAGACATGGTAATGAGTTGAATAAGTATCGAAGCACTGAAATAAATTTAGGAATGCAGCTATATTCGAATTTAATTTTCTAGGTTTTGCAAGATGTTGCTGTAGACGTTCCAACAATTGTTTTTAGTTGAAAATATCTTGTCCTCAGCTGCTTGAACGGGATGAAAATCTACAGAAGAACTATGTCCAATCTTGCCATGATACAAATTTTTGTTACCAAGGATTTGTTCCATCATTTGTTCTAGCTCTGATTGAGATATCTCAGTATTTGTTGCAGTGAGCGATGAGAAGCCTCACGCATTGTTATGCGAACGCTTGGGAGGAGGAAAAAACATACGGTGTAGATTGCAATTATAGAGAGGCATTGCAATTATAGAGAGGCTTATAAGATGCCTAAATATGCCCTTAAAATTTGCTTGGTGTGCAACTGCATCTGTTTGATGTCTTGCATCGCTGAAGTGCAACATTATTACATCTAGATGTATCTCGATTCAAAATGCATGGTTATTTCTATTTATTTTTTCAGTTGCAAACCAATTAGTTTGATATTCTGTTGGCTTTAAAGATATTCAGTCAAGCCAAGGCACTGGATGTTTTACGAGCTAGTCTAAACTACTTCATATTTTTATGCAGTATTGTTCTTGAGACCGATGGGAATGTCATAGCTGGAAAGGTTGCAACTCAAAGTATAGATTCTGCCGCTCCTTTGTCTGAGCAGGTATTATTCCCTATTTATTGTGTGGATCTTTCTCCAAAGCCAAATTTGAACCTTGAAAATTGAAATGCTCAGACGATTGGATAAACTCTAAATTATTCTTTTCCACAGACAATAAGTCAAGCACTGGCCACTGCACGTGAACATCTGACGAGATCACTTCTTACA GAGTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGAGGGGAAACGTGTGGCTGTCAAGTATTATTCAGATGAGTGGCCAACAAATAGTGCAAAGGAATCTTTTGAGAAAGCTGTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGCGGAGATAGCAATGTTTGAAAACAATATTGTCGTTTACAAGTTTGTGCAAGACCTTCATTTTTTTGTCACTGGTGGAGAATATGAAAACGAGCTTATCTTGGCAACAGTACTTCAAGGATTCTTTGATGCTGTTGGCCTTCTTCTTAGGGGTCACGTGGAAAAGAAGGAAGCACTTGAAAACTTGGATCTTATTTTGTTGTGCCTCGATGAAATTGTTGATGGAGGTATTGTTCTTGAGACCGATGGGAATGTCATAGCTGGAAAGGTTGCAACTCAAAGTATAGATTCTGCCGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCACTGGCCACTGCACGTGAACATCTGACGAGATCACTTCTTACA GAGTCCTGTCCTTCAATAAAAAATATTCTCCTGTTGGATTCTGAGGGGAAACGTGTGGCTGTCAAGTATTATTCAGATGAGTGGCCAACAAATAGTGCAAAGGAATCTTTTGAGAAAGCTGTATTTAGCAAAACTCAAAAGAGCAATGCTCGAAATGAAGCGGAGATAGCAATGTTTGAAAACAATATTGTCGTTTACAAGTTTGTGCAAGACCTTCATTTTTTTGTCACTGGTGGAGAATATGAAAACGAGCTTATCTTGGCAACAGTACTTCAAGGATTCTTTGATGCTGTTGGCCTTCTTCTTAGGGGTCACGTGGAAAAGAAGGAAGCACTTGAAAACTTGGATCTTATTTTGTTGTGCCTCGATGAAATTGTTGATGGAGGTATTGTTCTTGAGACCGATGGGAATGTCATAGCTGGAAAGGTTGCAACTCAAAGTATAGATTCTGCCGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCACTGGCCACTGCACGTGAACATCTGACGAGATCACTTCTTACA ESCPSIKNILLLDSEGKRVAVKYYSDEWPTNSAKESFEKAVFSKTQKSNARNEAEIAMFENNIVVYKFVQDLHFFVTGGEYENELILATVLQGFFDAVGLLLRGHVEKKEALENLDLILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSAAPLSEQTISQALATAREHLTRSLLT Homology
BLAST of MS010984 vs. NCBI nr
Match: XP_022142297.1 (coatomer subunit zeta-2-like [Momordica charantia]) HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. NCBI nr
Match: XP_038883879.1 (coatomer subunit zeta-2-like [Benincasa hispida]) HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87 Identity = 173/176 (98.30%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. NCBI nr
Match: XP_008439671.1 (PREDICTED: coatomer subunit zeta-1-like [Cucumis melo]) HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87 Identity = 172/176 (97.73%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. NCBI nr
Match: XP_004134635.1 (coatomer subunit zeta-2 [Cucumis sativus] >KGN49367.1 hypothetical protein Csa_003043 [Cucumis sativus]) HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87 Identity = 171/176 (97.16%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. NCBI nr
Match: XP_022978769.1 (coatomer subunit zeta-2-like [Cucurbita maxima]) HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87 Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of MS010984 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 4.2e-71 Identity = 138/176 (78.41%), Postives = 156/176 (88.64%), Query Frame = 0
BLAST of MS010984 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.2e-70 Identity = 135/175 (77.14%), Postives = 157/175 (89.71%), Query Frame = 0
BLAST of MS010984 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-69 Identity = 135/172 (78.49%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of MS010984 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.8e-69 Identity = 135/176 (76.70%), Postives = 155/176 (88.07%), Query Frame = 0
BLAST of MS010984 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.8e-67 Identity = 132/175 (75.43%), Postives = 153/175 (87.43%), Query Frame = 0
BLAST of MS010984 vs. ExPASy TrEMBL
Match: A0A6J1CMD1 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111012451 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.9e-89 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. ExPASy TrEMBL
Match: A0A1S3B001 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103484394 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87 Identity = 172/176 (97.73%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. ExPASy TrEMBL
Match: A0A6J1IUY9 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111478630 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87 Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of MS010984 vs. ExPASy TrEMBL
Match: A0A0A0KLW2 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_6G522120 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87 Identity = 171/176 (97.16%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of MS010984 vs. ExPASy TrEMBL
Match: A0A6J1EIR3 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111432995 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87 Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of MS010984 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein ) HSP 1 Score: 266.5 bits (680), Expect = 1.5e-71 Identity = 137/176 (77.84%), Postives = 155/176 (88.07%), Query Frame = 0
BLAST of MS010984 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein ) HSP 1 Score: 264.2 bits (674), Expect = 7.3e-71 Identity = 135/172 (78.49%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of MS010984 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein ) HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70 Identity = 135/176 (76.70%), Postives = 155/176 (88.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|