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MS010979 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGCGGGTAAAGCAGTTCAAGAGGCCCCAGAGCGACCGCAAGATCTCTGTCAAAGTATGTACATAAACTTCTACGAGTTTTACTCTGTACAAGTTAATTTTTACGCATGTTAGTGATTTGTATATGCGACTATGTCTATATGGGCTTTGCTCCGTTTATTTTGTATTGTTTCTCTTTATCTCTATTAAGTTTTATGTGGATCTGTAAATTATTAGGTGTTTTTGTTCGTTCTTCTCGTTATGGTATGCCATAAAGTTGTATAAAAAATCCAGTTTGATGATAGTCTTATCTCTTGTTTTATGTTTACGCATCGTTCCACCTTATATCTGCTGAGCGCTTTATAAAACGTGTTTCAAAGAATATTATTACTCAACAACTCTTAAATTATTATGATAAGAATATGCAACGTTGATTTTGTTTATCATGGCAAATATTGACGCAACAAGGTTGTTCTGGATTGCGAATTTGAGGGCATACGTGACCATTCTGCATGTTGTTTACTTGTAGCAATCTCTTACTTTGGATGATTTTTCAATCCCCTTGAGTTGCCGTTGGTTAATCAAAATTGTATACTAGGGAATCAGGCATATGGAAGTGTCAAAAGGCAAAGGAAATTTGTTGTATTTTTTTTAATTTCTTGTTGGGCTTATGTCTAATTGGTATCTTTCTCTCCCATGAAAGCCTGTGTAAGTTCTATAGTTTTTTGTTGTTATAAGATTCACCAATCTTGGGGCGAGGTTGCAAGTATACATTGAAGTTCAAGGTCAAATTTATCAATGGCCCTCTTAACCTGTATAAGCAATGTTCTATTTTTTTAACGTTCCTTCAACTTTTATTGGCCCATCGGAGCTGATGTTCAGTTGCTTTCATTTCTGTATCCAGCATTTTGTTTGAAGGGCAAAGGATGTATAATCCCCATATATAGAGCCTCTTTAATCTATTGAACAAGTATTTTGAAAATATTTGTCTTTTGGGCTCTCCTCTTGTAACCTTGCTTGTACTTCTAATGCTATCACTTGATATGATTCAACTGTATATTGGGTGGTAACATGATGTGTTGTGTTGTGTCTCGTCGAGTCTGTTGACCTTGATGGCAAACAATTCCTAATTATCTTCGATACTCGGTTTGTGTTTCAGTTGAAGCCTTATGCTATATTCTTGTACCTTACACATGCGCTGCACCTGATGTATTTTGTGATTTGTTTTTTATGTTTTTACATCATGTTTAGTCAAGTAAAAATTGTGTCCTCCTGTGACTTACCATGTAATTGGTGAAATGTGAATATACAGACAAACTGGCGTAGACCAAAGGGTATTGATTCTCGGGTCAGAAGAAAGTTCAAAGGATGCACTTTGATGCCAAACGTTGGGTATGGCACAGACAAGAAGACCCGTCATTACCTTCCTAATGGCTTCAAGAAGTTTGTTGTGCACAATGTCAAGGAGCTTGAACTGTTGATGATGCACAATAGGCAAGCATAAATATCTTCATATTTCATTTAGATATGACACTACTTCTTAACTTAGTGCTTTATTCACACATTTGTTATTTCAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACTAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAA ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGCGGGTAAAGCAGTTCAAGAGGCCCCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGTAGACCAAAGGGTATTGATTCTCGGGTCAGAAGAAAGTTCAAAGGATGCACTTTGATGCCAAACGTTGGGTATGGCACAGACAAGAAGACCCGTCATTACCTTCCTAATGGCTTCAAGAAGTTTGTTGTGCACAATGTCAAGGAGCTTGAACTGTTGATGATGCACAATAGGAATATCTTCATATTTCATTTAGATATGACACTACTTCTTAACTTAGTGCTTTATTCACACATTTGTTATTTCAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACTAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAA ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGCGGGTAAAGCAGTTCAAGAGGCCCCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGTAGACCAAAGGGTATTGATTCTCGGGTCAGAAGAAAGTTCAAAGGATGCACTTTGATGCCAAACGTTGGGTATGGCACAGACAAGAAGACCCGTCATTACCTTCCTAATGGCTTCAAGAAGTTTGTTGTGCACAATGTCAAGGAGCTTGAACTGTTGATGATGCACAATAGGAATATCTTCATATTTCATTTAGATATGACACTACTTCTTAACTTAGTGCTTTATTCACACATTTGTTATTTCAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACTAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAA MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRNIFIFHLDMTLLLNLVLYSHICYFRTYCAEIAHDVSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE Homology
BLAST of MS010979 vs. NCBI nr
Match: XP_022142034.1 (60S ribosomal protein L32-1-like [Momordica charantia] >XP_022142035.1 60S ribosomal protein L32-1-like [Momordica charantia]) HSP 1 Score: 248.8 bits (634), Expect = 3.1e-62 Identity = 133/158 (84.18%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. NCBI nr
Match: XP_022925632.1 (60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925633.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925634.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925635.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022978736.1 60S ribosomal protein L32-1-like isoform X2 [Cucurbita maxima] >XP_022978737.1 60S ribosomal protein L32-1-like isoform X2 [Cucurbita maxima] >XP_023543823.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023543824.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >KAF3435907.1 hypothetical protein FNV43_RR22999 [Rhamnella rubrinervis] >KAG6581400.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 248.4 bits (633), Expect = 4.0e-62 Identity = 132/158 (83.54%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. NCBI nr
Match: XP_038883938.1 (60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883939.1 60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883940.1 60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883941.1 60S ribosomal protein L32-1-like [Benincasa hispida]) HSP 1 Score: 247.3 bits (630), Expect = 8.9e-62 Identity = 131/158 (82.91%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. NCBI nr
Match: KAG6750307.1 (hypothetical protein POTOM_047411 [Populus tomentosa]) HSP 1 Score: 247.3 bits (630), Expect = 8.9e-62 Identity = 130/158 (82.28%), Postives = 140/158 (88.61%), Query Frame = 0
BLAST of MS010979 vs. NCBI nr
Match: XP_008439684.1 (PREDICTED: 60S ribosomal protein L32-1-like [Cucumis melo] >XP_008439685.1 PREDICTED: 60S ribosomal protein L32-1-like [Cucumis melo] >TYK13251.1 60S ribosomal protein L32-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61 Identity = 131/158 (82.91%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2) HSP 1 Score: 216.1 bits (549), Expect = 2.9e-55 Identity = 115/158 (72.78%), Postives = 125/158 (79.11%), Query Frame = 0
BLAST of MS010979 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.9e-54 Identity = 112/158 (70.89%), Postives = 124/158 (78.48%), Query Frame = 0
BLAST of MS010979 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 7.6e-40 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 0
BLAST of MS010979 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2) HSP 1 Score: 164.9 bits (416), Expect = 7.6e-40 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 0
BLAST of MS010979 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3) HSP 1 Score: 164.9 bits (416), Expect = 7.6e-40 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 0
BLAST of MS010979 vs. ExPASy TrEMBL
Match: A0A6J1CJS6 (60S ribosomal protein L32-1-like OS=Momordica charantia OX=3673 GN=LOC111012261 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62 Identity = 133/158 (84.18%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. ExPASy TrEMBL
Match: A0A6J1INV4 (60S ribosomal protein L32-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478603 PE=3 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62 Identity = 132/158 (83.54%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. ExPASy TrEMBL
Match: A0A6J1EC74 (60S ribosomal protein L32-1-like isoform X14 OS=Cucurbita moschata OX=3662 GN=LOC111432992 PE=3 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62 Identity = 132/158 (83.54%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. ExPASy TrEMBL
Match: A0A1S3AYX5 (60S ribosomal protein L32-1-like OS=Cucumis melo OX=3656 GN=LOC103484404 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62 Identity = 131/158 (82.91%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. ExPASy TrEMBL
Match: A0A2N9EJQ2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2833 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62 Identity = 131/158 (82.91%), Postives = 133/158 (84.18%), Query Frame = 0
BLAST of MS010979 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e ) HSP 1 Score: 216.1 bits (549), Expect = 2.1e-56 Identity = 115/158 (72.78%), Postives = 125/158 (79.11%), Query Frame = 0
BLAST of MS010979 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e ) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55 Identity = 112/158 (70.89%), Postives = 124/158 (78.48%), Query Frame = 0
BLAST of MS010979 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e ) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55 Identity = 112/158 (70.89%), Postives = 124/158 (78.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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