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MS010966 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAACCCAACCGAACAATCTGAAGAGCAGAAGAACGTGTATTCTGTGTGGGCTCTTCCTCCAGAAGATGTGGCTGTCAGAATCGAGACTCTGATGAGCGGCCTCAGATCCGAGTTCAGGGGGCCCCAATTCGAGCCACACATCACCGTCGTTGGGGCAATCCCTCTCACCCGAGACGACGCCCTCATCAAATTCCGCACCGCTTGCGAGGGGCGTAAGGCTTATCAAGCCACCGTCGATCATGTGGCCACTGGAACCTTCTTCTACCAGTGCGTTTTTCTCCTAATTCGTCCTACGCCTGAGGTGCATCTGCTTCCCCTCCTCCCCTCATCTTTCTGTTATCTGTTTGATTCTTCTCTCACTGCCCTTCTATTTCCAGGTCGTGGATATTAGTTCACACTGCTGCAGAATTTTTGGTTATAAGAACTCTACCCGTAAGCTATCTTGTATTCATTTGTGTTTTTTGTTTTGATATGTTTTATTCAAATTCGATGCATTATCTTCTTCAATGTTAGAATATACAACTTTATCAGAGACAATATAGCTTGTTGGTTGTTAAATCTAATCATGTATCATACCTTGGGGTTTTAAGGGTGCAAACAAAGTTACATTTGTTAGGGAAGGGAGTGGTCGAAGGACAATTATCATCTCCGTGAGGGTTATATCTGATTCGAGGCGAGATACAAATGACACTTTATTTCAGGGGAGGATTGTTGGGATCGTGAGGATTGTAAACAAACAAAGTTCCAATTGGATAGAGAATGGAGGGATCTATGTTATATAGGTGATGACAATTATCTCTATTGATATGAAGTCTTTTTGGTGAAACCACCAAAAAGCAAAGTTGTGGGGATTATGTTCAAAGTAGACAAGTATCTTTGGATACTGTTGTCCTTACCATCACATTCGATTCTAGGTACCTGACTAATTTTATAGGACAAGCATCCGGATATTACGACTTGACAAGCATGTTGATTGGCAAGTATCTCCAAAATGGTCTAAGGAGTTGAGTTGAGTTATCAGAAATAAACGTGAAAACATTACTTTTGTTAGTGTGTGTTGTCCAGTTTAGACGTTGAATTAATGTACCTTCTGATCTTCTTGTTTTACATCATTTATTTACAAACAAATTAACATCAATTCGAGATTGTCTACTGTTGCAACCTTGTGTAAATCGCTGAAATGATCTGATGGAAAAGAATAGAACAAAGAACTATGGTTTGTTTATATAAAGAAATAGAATAATGAAGTGTCAACTAAACTAATAATATGAATGTGATCTCTGTATCAGCCTACATGCCGCATTTGAGCCTACTGTATGCGCACTTAACAGATGAAGAAAAGACGAAGGTGAAAGATATAGCGGACAAATTGGATGAAGGGATTACTGGCCTGAGCTTTCCAGTTACCCGACTTGCATTGTACAAAACAGACACCGAAGATGAAACTCTAGAGTCTTGGGAGAAAATTACTGAATACAATCTTCGTTTAAGT ATGGCGAACCCAACCGAACAATCTGAAGAGCAGAAGAACGTGTATTCTGTGTGGGCTCTTCCTCCAGAAGATGTGGCTGTCAGAATCGAGACTCTGATGAGCGGCCTCAGATCCGAGTTCAGGGGGCCCCAATTCGAGCCACACATCACCGTCGTTGGGGCAATCCCTCTCACCCGAGACGACGCCCTCATCAAATTCCGCACCGCTTGCGAGGGGCGTAAGGCTTATCAAGCCACCGTCGATCATGTGGCCACTGGAACCTTCTTCTACCAGTGCGTTTTTCTCCTAATTCGTCCTACGCCTGAGGTCGTGGATATTAGTTCACACTGCTGCAGAATTTTTGGTTATAAGAACTCTACCCCCTACATGCCGCATTTGAGCCTACTGTATGCGCACTTAACAGATGAAGAAAAGACGAAGGTGAAAGATATAGCGGACAAATTGGATGAAGGGATTACTGGCCTGAGCTTTCCAGTTACCCGACTTGCATTGTACAAAACAGACACCGAAGATGAAACTCTAGAGTCTTGGGAGAAAATTACTGAATACAATCTTCGTTTAAGT ATGGCGAACCCAACCGAACAATCTGAAGAGCAGAAGAACGTGTATTCTGTGTGGGCTCTTCCTCCAGAAGATGTGGCTGTCAGAATCGAGACTCTGATGAGCGGCCTCAGATCCGAGTTCAGGGGGCCCCAATTCGAGCCACACATCACCGTCGTTGGGGCAATCCCTCTCACCCGAGACGACGCCCTCATCAAATTCCGCACCGCTTGCGAGGGGCGTAAGGCTTATCAAGCCACCGTCGATCATGTGGCCACTGGAACCTTCTTCTACCAGTGCGTTTTTCTCCTAATTCGTCCTACGCCTGAGGTCGTGGATATTAGTTCACACTGCTGCAGAATTTTTGGTTATAAGAACTCTACCCCCTACATGCCGCATTTGAGCCTACTGTATGCGCACTTAACAGATGAAGAAAAGACGAAGGTGAAAGATATAGCGGACAAATTGGATGAAGGGATTACTGGCCTGAGCTTTCCAGTTACCCGACTTGCATTGTACAAAACAGACACCGAAGATGAAACTCTAGAGTCTTGGGAGAAAATTACTGAATACAATCTTCGTTTAAGT MANPTEQSEEQKNVYSVWALPPEDVAVRIETLMSGLRSEFRGPQFEPHITVVGAIPLTRDDALIKFRTACEGRKAYQATVDHVATGTFFYQCVFLLIRPTPEVVDISSHCCRIFGYKNSTPYMPHLSLLYAHLTDEEKTKVKDIADKLDEGITGLSFPVTRLALYKTDTEDETLESWEKITEYNLRLS Homology
BLAST of MS010966 vs. NCBI nr
Match: XP_022142373.1 (cyclic phosphodiesterase [Momordica charantia]) HSP 1 Score: 389.0 bits (998), Expect = 2.3e-104 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of MS010966 vs. NCBI nr
Match: XP_023522563.1 (cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo] >XP_023543944.1 cyclic phosphodiesterase-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75 Identity = 140/184 (76.09%), Postives = 158/184 (85.87%), Query Frame = 0
BLAST of MS010966 vs. NCBI nr
Match: XP_022978766.1 (cyclic phosphodiesterase-like [Cucurbita maxima]) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75 Identity = 143/189 (75.66%), Postives = 160/189 (84.66%), Query Frame = 0
BLAST of MS010966 vs. NCBI nr
Match: XP_023543945.1 (cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75 Identity = 139/184 (75.54%), Postives = 158/184 (85.87%), Query Frame = 0
BLAST of MS010966 vs. NCBI nr
Match: XP_008439703.1 (PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]) HSP 1 Score: 292.0 bits (746), Expect = 3.8e-75 Identity = 139/192 (72.40%), Postives = 161/192 (83.85%), Query Frame = 0
BLAST of MS010966 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.5e-53 Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = 0
BLAST of MS010966 vs. ExPASy Swiss-Prot
Match: Q6CGD3 (2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=CPD1 PE=3 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06 Identity = 48/212 (22.64%), Postives = 85/212 (40.09%), Query Frame = 0
BLAST of MS010966 vs. ExPASy TrEMBL
Match: A0A6J1CN42 (cyclic phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111012510 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of MS010966 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 8.2e-76 Identity = 143/189 (75.66%), Postives = 160/189 (84.66%), Query Frame = 0
BLAST of MS010966 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75 Identity = 139/192 (72.40%), Postives = 161/192 (83.85%), Query Frame = 0
BLAST of MS010966 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73 Identity = 138/184 (75.00%), Postives = 157/184 (85.33%), Query Frame = 0
BLAST of MS010966 vs. ExPASy TrEMBL
Match: A0A0A0KLS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520400 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71 Identity = 133/192 (69.27%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of MS010966 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein ) HSP 1 Score: 209.9 bits (533), Expect = 1.7e-54 Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = 0
BLAST of MS010966 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein ) HSP 1 Score: 164.9 bits (416), Expect = 6.5e-41 Identity = 80/182 (43.96%), Postives = 118/182 (64.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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