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MS010959 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGTCATTGCTTGAGGTTGCTTTAGATGGACAGGGCGCTAATATTGATTTCTCATATTCGATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTGTTAGTTTTCTTATTCCTTCCGAGTCTTGATCTTATATTGCTTTGCATACTAGTTTTCAAGTCTCACTTCACATTCTGTGTGTACAGTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATAGCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAGGTT CTGTCATTGCTTGAGGTTGCTTTAGATGGACAGGGCGCTAATATTGATTTCTCATATTCGATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATAGCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAGGTT CTGTCATTGCTTGAGGTTGCTTTAGATGGACAGGGCGCTAATATTGATTTCTCATATTCGATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATAGCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAGGTT LSLLEVALDGQGANIDFSYSMQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAENESIGRERYNFMQV Homology
BLAST of MS010959 vs. NCBI nr
Match: RWR96626.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 154.1 bits (388), Expect = 6.0e-34 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS010959 vs. NCBI nr
Match: EAZ07153.1 (hypothetical protein OsI_29403 [Oryza sativa Indica Group]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of MS010959 vs. NCBI nr
Match: XP_021911310.1 (uncharacterized protein At4g14342-like [Carica papaya]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS010959 vs. NCBI nr
Match: MQM06478.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of MS010959 vs. NCBI nr
Match: KAB1219260.1 (hypothetical protein CJ030_MR3G001257 [Morella rubra]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MS010959 vs. ExPASy Swiss-Prot
Match: P58728 (Uncharacterized protein At4g14342 OS=Arabidopsis thaliana OX=3702 GN=At4g14342 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.7e-35 Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of MS010959 vs. ExPASy Swiss-Prot
Match: Q9LW64 (Uncharacterized protein At3g23325 OS=Arabidopsis thaliana OX=3702 GN=At3g23325 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-34 Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of MS010959 vs. ExPASy Swiss-Prot
Match: Q9VHI4 (Splicing factor 3B subunit 5 OS=Drosophila melanogaster OX=7227 GN=Sf3b5 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21 Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of MS010959 vs. ExPASy Swiss-Prot
Match: Q56K13 (Splicing factor 3B subunit 5 OS=Bos taurus OX=9913 GN=SF3B5 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21 Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of MS010959 vs. ExPASy Swiss-Prot
Match: Q9BWJ5 (Splicing factor 3B subunit 5 OS=Homo sapiens OX=9606 GN=SF3B5 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21 Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of MS010959 vs. ExPASy TrEMBL
Match: A0A3S3R9V2 (Splicing factor subunit OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02602300 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS010959 vs. ExPASy TrEMBL
Match: J3MTF8 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34 Identity = 71/81 (87.65%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of MS010959 vs. ExPASy TrEMBL
Match: A0A803R3K1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.0e-34 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS010959 vs. ExPASy TrEMBL
Match: A0A2N9EJH4 (Splicing factor subunit OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2790 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.0e-34 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MS010959 vs. ExPASy TrEMBL
Match: A0A6A1W901 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G001257 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.5e-34 Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MS010959 vs. TAIR 10
Match: AT4G14342.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 ) HSP 1 Score: 147.9 bits (372), Expect = 4.0e-36 Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of MS010959 vs. TAIR 10
Match: AT3G23325.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 ) HSP 1 Score: 146.4 bits (368), Expect = 1.2e-35 Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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