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MS010952 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTTTTTTTTTTTTTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAA CTTTTTTTTTTTTTTTTTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAA CTTTTTTTTTTTTTTTTTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAA LFFFFFHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLK Homology
BLAST of MS010952 vs. NCBI nr
Match: KAF5791290.1 (putative photosystem I PsaA/PsaB [Helianthus annuus]) HSP 1 Score: 72.4 bits (176), Expect = 9.7e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. NCBI nr
Match: YP_009681135.1 (photosystem I P700 apoprotein A1 [Sagittaria trifolia] >QDG01474.1 photosystem I P700 apoprotein A1 [Sagittaria trifolia]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. NCBI nr
Match: YP_009431390.1 (photosystem I P700 apoprotein A1 [Anthericum ramosum] >ASW26826.1 photosystem I P700 apoprotein A1 [Anthericum ramosum]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. NCBI nr
Match: YP_009992614.1 (photosystem I P700 chlorophyll a apoprotein A1 [Oenothera curtiflora] >QNO33275.1 photosystem I P700 chlorophyll a apoprotein A1 [Oenothera curtiflora]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. NCBI nr
Match: QBW96545.1 (photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium aff. lobatum SJK-2019] >QBW96603.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium lobatum] >QBW96623.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium pillansii] >QBW96648.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium triste] >QBW96604.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium lobatum]) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy Swiss-Prot
Match: Q3V534 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy Swiss-Prot
Match: A4QJB5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema cordifolium OX=434059 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy Swiss-Prot
Match: A4QJJ9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema grandiflorum OX=72657 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy Swiss-Prot
Match: A1EA08 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Agrostis stolonifera OX=63632 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy Swiss-Prot
Match: Q70Y03 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 GN=psaA PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy TrEMBL
Match: A0A251TWI7 (Putative photosystem I PsaA/PsaB OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0260841 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.7e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy TrEMBL
Match: A0A218L7E5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aegilops crassa OX=4481 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.1e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy TrEMBL
Match: A0A481XQM4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Holcoglossum nujiangense OX=536150 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.1e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy TrEMBL
Match: A0A218KG56 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.1e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. ExPASy TrEMBL
Match: A0A075EBS5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus fremontii OX=295326 GN=psaA PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.1e-10 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-13 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MS010952 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-06 Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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