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MS010942 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGCTCCATAGTTGTAAATGTGCCATTTCCTTGGGCAATTGAACTCAGGTTTCGTCCTTACCTTCATTCCAATAAGAATCGATCATCATCATCTGCGCATTTTCTCTGCTCTCTCACACGGCCTCCAATTTCTCGCCTTATCAAAGCTACTGCTGCGTCGTCCATGGAGGTTGAGGAAGGTGGAAAATCTGCAGCTGTTGGCAGCACAGCTTCGCCCATGAAGCTCTTGTTCGTCGAGATGGGTGTCGGATACGATCAACATGGGTGAATTTTCATATTTCTTTCTTCTTACAAGTTTTCTGTTTGTTAGATATATATGAACTCGTGATGATTTCGGGAATACAGTTACGAACTTGTTTACAGTGGGAAAAGAATGAGATTAATAAGTGGATTGTCTTTTGCCATACAGCCAAGATGTCACGGCAGCTGCTATGCGGGCCTGCAGGGATGCCATATCTTCCAATTCGATTCCAGCATTCCGTAGAGGTATGAATTTGGCTCCTTCTTCTTGGTAGCCTAAATTACGCCGTAGGGTCTTCCGTTAATAGGGTCTTTTCTGTTACGTATTTTTGGTTGGTAATGTTTGAATCAGTGCTCTCTACCTCCTGTAAACTACATTCATTTAGATATATAAAGTATCATCATTTTCTCGGAAAGAATAATCATGTCTTTGCACTGTTCTGAATTTATTTCTGAATTCAGAATCTTAGTTTTTTAGTTACTTGTGGCTTCTGTTAGTTAAGTTTATGATGCAAGACGTTGCCTAGTTTCATTATGTTAATCTTTCAATTAGGACTAATGACAAGGTGTTGTGTAGGTTCCATTCCTGGAGTCACATTTGATCAGATGAAACTTCAGATCAAACTTGGAGTACCACAGACACTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCTGTCTTCCCATAGTAAGTATTGAACTATTTCAGTTGGATGACTTCATTTTTAGGGGAAAATGCAGAGCACTTGTTCTTGTAATTCGCTACACCTTGAGCTTTAGGTTAGGCAGATAAGTGTTAGTGATGCAAACAAATAAATGAGCCTTTACAATCCAAACAGTAGGAGGACTAAGTTAAACTACTAGTTAAAGCCATTTTAGCAAAATAACCAAACAGAGAATGAGAGGGGATGGAAAAGTAACAAGTTAAAAAGGCAAATGAGGTAAGCCAAGAGCAACAGAAGCCAAAGCAAAGATCTGTGAGGATGCTGAGCTGTAGAAGAAGGCTGACTAGATTAAGATGCTGAGTTGGTTAGTGGCTTGCTTTAGCCACCCTCCTAAGCTTGTGGGTGTTTCAATCACTCCAAGATTCTCTGAAGAAAGTAATTTGTAGGCAGCTTGAGGTTGAGGCTAATATTCTCCTATCTGTTAAGAATATGGTATATACCTACTTCCAGTTCTTTGTTAATGATCTTACCTCTGATAAAAGTGAAGATCTATCTCTGGATGTTTGGTCCTTGCACGGTAAATCAGGTTTGCAGCTACAGCATTAGCATTGATGCTATTACACCGAGAGAGAGAACAGAAAGATGGTTCAAGGTTATTTGAGAAGAGATTTGAACCAAGTAGAAGGATTGAGGTTGTCAGGATTCTCTGTCGGTGTGCCAAGATGGTATAAATAATCCTTTATCTTCTATTGGAACAGCACCTCCTTAGTTTTCACGTCCTTCACGTAAAAGAAAGAGGGTAAAATTCAACCAAACATTCTTCTCATAGGTCAAAATAAGGATTCTTACTAGGTTCTTTTTTATTCTAGGTAGGCACTCATGTGACGTTCCTCAGTTTTAGAGAACTAGATGCATCCTAAGTATGCTTACTAGGTTCATTTTTGCAGAAACCAACCATTACATCTTCAATATATTTTTGAGAAAGTGGAGTCTGTCTTTCCATTGAGTAATGAACTCTTTTCTCAAACCTCTGTTGCATCATAAAATACTTTGCCAATCTATTAGGAATGCCTTTGGGGTAATTAGGGTTATTAATAGAATAGTAAGGTTTGTTAGTAACTAATTGAGGAATTGGTTAGTAGAGATTTGTTATAAATAGAGTGAGGGGGAAAGGATAATGGGTGGCAATTTAGCATAGTTTTGACTTGAGTGATCCAAGTACCTCGAATTACTTGGGGATTAGTCCTTCTAACCTTTTATCTTTCCATCTATTTCAACTATTTGGTTTCTATCACAATCATGATTTCTTTGATCTCCTCCATAATGTGACCCTACTGCTTCCCTTTTCCCTCATTTGGTGGGACTCCTGGAGTTTGTAGAACCAGCGGGTCTGTATATTATTATCATTATTTTAAATTTCGGGTTGACAATTATTTCGTCAATTATTTCGTCTTATTTTTCTGTGCGCATACTCATATTTTATCATCATTCATGAGTAACTAGTCTATTGCTTACTCTCCTGTTGGTCTGCCTTTTGGATTTAGTCTTCGTGGAACCAGTTATCTTGAAATAACATGTTAGCGAGAAAGATTGTTTGGATGGACAGACATTATCTTTCATCGATGATGGCTAACACCTACAAACCATCCTATACGAAAGATCATTGAATCTTTCCCTCGCTTGATTTACTGCAGTGGAAAGATTCTGAATGTTGAGGTCGTTGATGGTGGCTTAATATGCTCCAGCGGTGTGCACGTGGAAGAAATGGGAGACAAAAATGATGACTGTTATATAGTAAATGCTGCTGTATATGTTGGCTAT ATGACAGGCTCCATAGTTGTAAATGTGCCATTTCCTTGGGCAATTGAACTCAGGTTTCGTCCTTACCTTCATTCCAATAAGAATCGATCATCATCATCTGCGCATTTTCTCTGCTCTCTCACACGGCCTCCAATTTCTCGCCTTATCAAAGCTACTGCTGCGTCGTCCATGGAGGTTGAGGAAGGTGGAAAATCTGCAGCTGTTGGCAGCACAGCTTCGCCCATGAAGCTCTTGTTCGTCGAGATGGGTGTCGGATACGATCAACATGGCCAAGATGTCACGGCAGCTGCTATGCGGGCCTGCAGGGATGCCATATCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGATCAGATGAAACTTCAGATCAAACTTGGAGTACCACAGACACTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCTGTCTTCCCATATGGAAAGATTCTGAATGTTGAGGTCGTTGATGGTGGCTTAATATGCTCCAGCGGTGTGCACGTGGAAGAAATGGGAGACAAAAATGATGACTGTTATATAGTAAATGCTGCTGTATATGTTGGCTAT ATGACAGGCTCCATAGTTGTAAATGTGCCATTTCCTTGGGCAATTGAACTCAGGTTTCGTCCTTACCTTCATTCCAATAAGAATCGATCATCATCATCTGCGCATTTTCTCTGCTCTCTCACACGGCCTCCAATTTCTCGCCTTATCAAAGCTACTGCTGCGTCGTCCATGGAGGTTGAGGAAGGTGGAAAATCTGCAGCTGTTGGCAGCACAGCTTCGCCCATGAAGCTCTTGTTCGTCGAGATGGGTGTCGGATACGATCAACATGGCCAAGATGTCACGGCAGCTGCTATGCGGGCCTGCAGGGATGCCATATCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCACATTTGATCAGATGAAACTTCAGATCAAACTTGGAGTACCACAGACACTTCAACAATCCTTGGATATTGAAAAAGTCAAGTCTGTCTTCCCATATGGAAAGATTCTGAATGTTGAGGTCGTTGATGGTGGCTTAATATGCTCCAGCGGTGTGCACGTGGAAGAAATGGGAGACAAAAATGATGACTGTTATATAGTAAATGCTGCTGTATATGTTGGCTAT MTGSIVVNVPFPWAIELRFRPYLHSNKNRSSSSAHFLCSLTRPPISRLIKATAASSMEVEEGGKSAAVGSTASPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVTFDQMKLQIKLGVPQTLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY Homology
BLAST of MS010942 vs. NCBI nr
Match: XP_022142213.1 (uncharacterized protein LOC111012382 isoform X1 [Momordica charantia]) HSP 1 Score: 384.4 bits (986), Expect = 5.8e-103 Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of MS010942 vs. NCBI nr
Match: XP_022925764.1 (uncharacterized protein LOC111433074 [Cucurbita moschata] >KAG6581352.1 hypothetical protein SDJN03_21354, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.2 bits (827), Expect = 1.6e-84 Identity = 166/195 (85.13%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of MS010942 vs. NCBI nr
Match: XP_023544561.1 (uncharacterized protein LOC111804102 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.4 bits (825), Expect = 2.7e-84 Identity = 166/195 (85.13%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of MS010942 vs. NCBI nr
Match: XP_038883708.1 (uncharacterized protein LOC120074614 isoform X1 [Benincasa hispida]) HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82 Identity = 162/195 (83.08%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of MS010942 vs. NCBI nr
Match: XP_008439752.1 (PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo]) HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80 Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of MS010942 vs. ExPASy TrEMBL
Match: A0A6J1CMQ6 (uncharacterized protein LOC111012382 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012382 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 2.8e-103 Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of MS010942 vs. ExPASy TrEMBL
Match: A0A6J1ED44 (uncharacterized protein LOC111433074 OS=Cucurbita moschata OX=3662 GN=LOC111433074 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.6e-85 Identity = 166/195 (85.13%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of MS010942 vs. ExPASy TrEMBL
Match: A0A0A0KNJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519490 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80 Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of MS010942 vs. ExPASy TrEMBL
Match: A0A1S3B079 (uncharacterized protein LOC103484457 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484457 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80 Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of MS010942 vs. ExPASy TrEMBL
Match: A0A6J1CKY1 (uncharacterized protein LOC111012382 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012382 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 7.9e-74 Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of MS010942 vs. TAIR 10
Match: AT1G29040.1 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). ) HSP 1 Score: 227.6 bits (579), Expect = 8.4e-60 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of MS010942 vs. TAIR 10
Match: AT1G29040.4 (unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). ) HSP 1 Score: 227.6 bits (579), Expect = 8.4e-60 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of MS010942 vs. TAIR 10
Match: AT1G29040.2 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 190 Blast hits to 190 proteins in 92 species: Archae - 2; Bacteria - 141; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). ) HSP 1 Score: 192.2 bits (487), Expect = 3.9e-49 Identity = 106/176 (60.23%), Postives = 124/176 (70.45%), Query Frame = 0
BLAST of MS010942 vs. TAIR 10
Match: AT1G29040.3 (unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 95.9 bits (237), Expect = 3.8e-20 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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