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MS010931 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAATACCATTAGATGCTGCATCTCCTGCATACTTCCATGCGGTGCTCTGGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAAGAGATCGCGGGCACCATCCGCGCCAGCGAGGTCATGAAGGCCAACCCAGAGCACGTGCTCAAGAAACCGTCATCGCCGTCCGACCAGCTGGGCGTGGTCCCCAAGATCGTGATCGTACCGCCGGACGCCGAGCTCCAGCGTGGCAAGATTTACTTTCTCATGCCGGTTCCTCCTCCAGCCGCCCGCTCCAGATCTCTCACCAAGAAGAAGAAGAGGACGTCGGAATTACTACCGGAAACCGCCGTGGGTTCCGATTTATCGGTGGTGGTTTCCGATCGGTATCTGAGTGAAATACTGTCCGAGAAGTTGTCGACGACTGGGAAGGAGAAGCGGCGAGGGCGGGTCGGGGTGTGGAGGCCTCATCTAGAGAGCATTTCCGAGTTCCCAACCGATCTT ATGAAGAATACCATTAGATGCTGCATCTCCTGCATACTTCCATGCGGTGCTCTGGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAAGAGATCGCGGGCACCATCCGCGCCAGCGAGGTCATGAAGGCCAACCCAGAGCACGTGCTCAAGAAACCGTCATCGCCGTCCGACCAGCTGGGCGTGGTCCCCAAGATCGTGATCGTACCGCCGGACGCCGAGCTCCAGCGTGGCAAGATTTACTTTCTCATGCCGGTTCCTCCTCCAGCCGCCCGCTCCAGATCTCTCACCAAGAAGAAGAAGAGGACGTCGGAATTACTACCGGAAACCGCCGTGGGTTCCGATTTATCGGTGGTGGTTTCCGATCGGTATCTGAGTGAAATACTGTCCGAGAAGTTGTCGACGACTGGGAAGGAGAAGCGGCGAGGGCGGGTCGGGGTGTGGAGGCCTCATCTAGAGAGCATTTCCGAGTTCCCAACCGATCTT ATGAAGAATACCATTAGATGCTGCATCTCCTGCATACTTCCATGCGGTGCTCTGGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAAGAGATCGCGGGCACCATCCGCGCCAGCGAGGTCATGAAGGCCAACCCAGAGCACGTGCTCAAGAAACCGTCATCGCCGTCCGACCAGCTGGGCGTGGTCCCCAAGATCGTGATCGTACCGCCGGACGCCGAGCTCCAGCGTGGCAAGATTTACTTTCTCATGCCGGTTCCTCCTCCAGCCGCCCGCTCCAGATCTCTCACCAAGAAGAAGAAGAGGACGTCGGAATTACTACCGGAAACCGCCGTGGGTTCCGATTTATCGGTGGTGGTTTCCGATCGGTATCTGAGTGAAATACTGTCCGAGAAGTTGTCGACGACTGGGAAGGAGAAGCGGCGAGGGCGGGTCGGGGTGTGGAGGCCTCATCTAGAGAGCATTTCCGAGTTCCCAACCGATCTT MKNTIRCCISCILPCGALDVIRIVHCNGHVEEIAGTIRASEVMKANPEHVLKKPSSPSDQLGVVPKIVIVPPDAELQRGKIYFLMPVPPPAARSRSLTKKKKRTSELLPETAVGSDLSVVVSDRYLSEILSEKLSTTGKEKRRGRVGVWRPHLESISEFPTDL Homology
BLAST of MS010931 vs. NCBI nr
Match: XP_038882770.1 (uncharacterized protein LOC120073923 [Benincasa hispida]) HSP 1 Score: 256.1 bits (653), Expect = 2.0e-64 Identity = 134/168 (79.76%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of MS010931 vs. NCBI nr
Match: XP_023543275.1 (uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543276.1 uncharacterized protein LOC111803203 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.5 bits (641), Expect = 4.9e-63 Identity = 130/166 (78.31%), Postives = 144/166 (86.75%), Query Frame = 0
BLAST of MS010931 vs. NCBI nr
Match: KAA0052618.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK13210.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 251.1 bits (640), Expect = 6.4e-63 Identity = 131/168 (77.98%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of MS010931 vs. NCBI nr
Match: XP_031742479.1 (uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hypothetical protein Csa_003542 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 8.3e-63 Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 0
BLAST of MS010931 vs. NCBI nr
Match: KAG6581359.1 (hypothetical protein SDJN03_21361, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034645.1 hypothetical protein SDJN02_04375, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.4 bits (633), Expect = 4.1e-62 Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0
BLAST of MS010931 vs. ExPASy TrEMBL
Match: A0A5D3CP55 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008230 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63 Identity = 131/168 (77.98%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of MS010931 vs. ExPASy TrEMBL
Match: A0A0A0KI99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 4.0e-63 Identity = 128/167 (76.65%), Postives = 144/167 (86.23%), Query Frame = 0
BLAST of MS010931 vs. ExPASy TrEMBL
Match: A0A6J1IUZ9 (uncharacterized protein LOC111478638 OS=Cucurbita maxima OX=3661 GN=LOC111478638 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62 Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0
BLAST of MS010931 vs. ExPASy TrEMBL
Match: A0A6J1EJJ7 (uncharacterized protein LOC111433184 OS=Cucurbita moschata OX=3662 GN=LOC111433184 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62 Identity = 131/166 (78.92%), Postives = 144/166 (86.75%), Query Frame = 0
BLAST of MS010931 vs. ExPASy TrEMBL
Match: A0A6P3Z812 (uncharacterized protein LOC107410851 OS=Ziziphus jujuba OX=326968 GN=LOC107410974 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 3.0e-58 Identity = 124/170 (72.94%), Postives = 139/170 (81.76%), Query Frame = 0
BLAST of MS010931 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 182.6 bits (462), Expect = 2.6e-46 Identity = 105/193 (54.40%), Postives = 130/193 (67.36%), Query Frame = 0
BLAST of MS010931 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33 Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 0
BLAST of MS010931 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32 Identity = 79/172 (45.93%), Postives = 110/172 (63.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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