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MS010922 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCGGAGAAGGTATTGAATTTCTACGATTGGTGCTGGTTCCAGCGCCAAATCTTCGAAAAGGAACAAAATTTTTCGTCTTGGTCGAGTTCTGAAGATAACCCAGATGGCGAAAATAGTGTTAAAGCATTAGAAACAATATCTATGGCTGGTTCTCTCTCACCTAACTCAGTTCTGTCGACTTGGAAGCTCAGATCTGTGTTCTCAGAAACGTCAGTATTGGAGAGCCCAAAACCGACACCGTTTAAGGCAGAATTGGGAAAGATGAGAAGAAAAAGGAGGTGTGAAAGAATGAGTCTTTCAGAACTTGAATATGAAGAGGTGAAAGGATTTGGGGATTTGGGGTTTGTTTTCTCAGAGGAAGATAGGAATTCAAGCTTGGGATTGGTCATTCCTGGATTGCATAGATTAGGTAATTTGGAAGAATTAGAAAAAGAAGAAGGAGAGAAGAAGATTTGGGATGAATCATCAAAGATTTCAAGGCCTTACCTTTCAGAGGCATGGGAAGTTTTGGGTTTGGACAGAAGAAGGGAAGAAATTAAGCCATTGTTGAGGAATTGGAAGTTGCCTTCTTACAGGAATGAAGCTGACATGAAAGAAAACCTCAGGTGGTGGGCTCATACTGTTGCTTCCACTGTTAGA ATGGATGCGGAGAAGGTATTGAATTTCTACGATTGGTGCTGGTTCCAGCGCCAAATCTTCGAAAAGGAACAAAATTTTTCGTCTTGGTCGAGTTCTGAAGATAACCCAGATGGCGAAAATAGTGTTAAAGCATTAGAAACAATATCTATGGCTGGTTCTCTCTCACCTAACTCAGTTCTGTCGACTTGGAAGCTCAGATCTGTGTTCTCAGAAACGTCAGTATTGGAGAGCCCAAAACCGACACCGTTTAAGGCAGAATTGGGAAAGATGAGAAGAAAAAGGAGGTGTGAAAGAATGAGTCTTTCAGAACTTGAATATGAAGAGGTGAAAGGATTTGGGGATTTGGGGTTTGTTTTCTCAGAGGAAGATAGGAATTCAAGCTTGGGATTGGTCATTCCTGGATTGCATAGATTAGGTAATTTGGAAGAATTAGAAAAAGAAGAAGGAGAGAAGAAGATTTGGGATGAATCATCAAAGATTTCAAGGCCTTACCTTTCAGAGGCATGGGAAGTTTTGGGTTTGGACAGAAGAAGGGAAGAAATTAAGCCATTGTTGAGGAATTGGAAGTTGCCTTCTTACAGGAATGAAGCTGACATGAAAGAAAACCTCAGGTGGTGGGCTCATACTGTTGCTTCCACTGTTAGA ATGGATGCGGAGAAGGTATTGAATTTCTACGATTGGTGCTGGTTCCAGCGCCAAATCTTCGAAAAGGAACAAAATTTTTCGTCTTGGTCGAGTTCTGAAGATAACCCAGATGGCGAAAATAGTGTTAAAGCATTAGAAACAATATCTATGGCTGGTTCTCTCTCACCTAACTCAGTTCTGTCGACTTGGAAGCTCAGATCTGTGTTCTCAGAAACGTCAGTATTGGAGAGCCCAAAACCGACACCGTTTAAGGCAGAATTGGGAAAGATGAGAAGAAAAAGGAGGTGTGAAAGAATGAGTCTTTCAGAACTTGAATATGAAGAGGTGAAAGGATTTGGGGATTTGGGGTTTGTTTTCTCAGAGGAAGATAGGAATTCAAGCTTGGGATTGGTCATTCCTGGATTGCATAGATTAGGTAATTTGGAAGAATTAGAAAAAGAAGAAGGAGAGAAGAAGATTTGGGATGAATCATCAAAGATTTCAAGGCCTTACCTTTCAGAGGCATGGGAAGTTTTGGGTTTGGACAGAAGAAGGGAAGAAATTAAGCCATTGTTGAGGAATTGGAAGTTGCCTTCTTACAGGAATGAAGCTGACATGAAAGAAAACCTCAGGTGGTGGGCTCATACTGTTGCTTCCACTGTTAGA MDAEKVLNFYDWCWFQRQIFEKEQNFSSWSSSEDNPDGENSVKALETISMAGSLSPNSVLSTWKLRSVFSETSVLESPKPTPFKAELGKMRRKRRCERMSLSELEYEEVKGFGDLGFVFSEEDRNSSLGLVIPGLHRLGNLEELEKEEGEKKIWDESSKISRPYLSEAWEVLGLDRRREEIKPLLRNWKLPSYRNEADMKENLRWWAHTVASTVR Homology
BLAST of MS010922 vs. NCBI nr
Match: XP_008439724.1 (PREDICTED: uncharacterized protein LOC103484438 [Cucumis melo] >ADN34031.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0052609.1 uncharacterized protein E6C27_scaffold120G002170 [Cucumis melo var. makuwa] >TYK13218.1 uncharacterized protein E5676_scaffold255G008330 [Cucumis melo var. makuwa]) HSP 1 Score: 255.0 bits (650), Expect = 5.8e-64 Identity = 142/221 (64.25%), Postives = 168/221 (76.02%), Query Frame = 0
BLAST of MS010922 vs. NCBI nr
Match: XP_022142329.1 (uncharacterized protein LOC111012470 [Momordica charantia]) HSP 1 Score: 235.3 bits (599), Expect = 4.8e-58 Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of MS010922 vs. NCBI nr
Match: XP_002305058.2 (uncharacterized protein LOC7476327 [Populus trichocarpa] >ABK93152.1 unknown [Populus trichocarpa] >PNT39796.1 hypothetical protein POPTR_004G059900 [Populus trichocarpa]) HSP 1 Score: 183.0 bits (463), Expect = 2.8e-42 Identity = 110/246 (44.72%), Postives = 147/246 (59.76%), Query Frame = 0
BLAST of MS010922 vs. NCBI nr
Match: XP_010100736.1 (uncharacterized protein LOC21389258 [Morus notabilis] >EXB84039.1 hypothetical protein L484_005803 [Morus notabilis]) HSP 1 Score: 182.6 bits (462), Expect = 3.7e-42 Identity = 119/246 (48.37%), Postives = 148/246 (60.16%), Query Frame = 0
BLAST of MS010922 vs. NCBI nr
Match: KAF9858049.1 (hypothetical protein H0E87_010118 [Populus deltoides]) HSP 1 Score: 182.2 bits (461), Expect = 4.8e-42 Identity = 110/246 (44.72%), Postives = 146/246 (59.35%), Query Frame = 0
BLAST of MS010922 vs. ExPASy TrEMBL
Match: A0A0A0KKE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519700 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 4.3e-65 Identity = 144/220 (65.45%), Postives = 168/220 (76.36%), Query Frame = 0
BLAST of MS010922 vs. ExPASy TrEMBL
Match: A0A5A7UGH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008330 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64 Identity = 142/221 (64.25%), Postives = 168/221 (76.02%), Query Frame = 0
BLAST of MS010922 vs. ExPASy TrEMBL
Match: E5GC32 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64 Identity = 142/221 (64.25%), Postives = 168/221 (76.02%), Query Frame = 0
BLAST of MS010922 vs. ExPASy TrEMBL
Match: A0A1S3AZ11 (uncharacterized protein LOC103484438 OS=Cucumis melo OX=3656 GN=LOC103484438 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64 Identity = 142/221 (64.25%), Postives = 168/221 (76.02%), Query Frame = 0
BLAST of MS010922 vs. ExPASy TrEMBL
Match: A0A6J1CLA1 (uncharacterized protein LOC111012470 OS=Momordica charantia OX=3673 GN=LOC111012470 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 2.3e-58 Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of MS010922 vs. TAIR 10
Match: AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25 Identity = 90/269 (33.46%), Postives = 146/269 (54.28%), Query Frame = 0
BLAST of MS010922 vs. TAIR 10
Match: AT2G31560.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 42.0 bits (97), Expect = 7.2e-04 Identity = 35/120 (29.17%), Postives = 55/120 (45.83%), Query Frame = 0
BLAST of MS010922 vs. TAIR 10
Match: AT2G31560.2 (Protein of unknown function (DUF1685) ) HSP 1 Score: 42.0 bits (97), Expect = 7.2e-04 Identity = 35/120 (29.17%), Postives = 55/120 (45.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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