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MS010921 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGGGAGACAAAGCTGTGTCTTCTGGAATGCTGTTCTCTTCATTCATAAGCTCAAACTCAAGCTGGAGGCGATTGAGAGAGAGTATTCAAATCTATTGGCTGCGAAAAGAGAAATCTTGAACAACTCTGTGAAGTCTTTTCATTTCCCCAAGGTCCTCTGTTTCTCTCTGTCTTTAAAAAGTTGAATTCTTCCCAATTAATATGTATGTATATTTAGATGTGTTGTTTGTGATGGGATATGAGTGAGCAGGAGGTGGAGGTGGAGAAGATTGGAAAAGAATTTAGAGTGAGATTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTTTTGGAGGCGTTTGACAAAATGGGTCTAAATGTTCTTGAAGCTAGAGTTTCGTGTACGGATTGTTTTTCCATGGAAGCCGTTGCTGTAGCTGAAGTTGAACAATCGCTTGATGTAAGAGACATAAGGGAAGCTATTAACGTAGCCATTGATGGGAAATTGTTAGCTGCAAATCAGATTCAGCAAGAAATTCCAGAGGAAAATGATAAAATT ATGCAGGGGAGACAAAGCTGTGTCTTCTGGAATGCTGTTCTCTTCATTCATAAGCTCAAACTCAAGCTGGAGGCGATTGAGAGAGAGTATTCAAATCTATTGGCTGCGAAAAGAGAAATCTTGAACAACTCTGTGAAGTCTTTTCATTTCCCCAAGGAGGTGGAGGTGGAGAAGATTGGAAAAGAATTTAGAGTGAGATTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTTTTGGAGGCGTTTGACAAAATGGGTCTAAATGTTCTTGAAGCTAGAGTTTCGTGTACGGATTGTTTTTCCATGGAAGCCGTTGCTGTAGCTGAAGTTGAACAATCGCTTGATGTAAGAGACATAAGGGAAGCTATTAACGTAGCCATTGATGGGAAATTGTTAGCTGCAAATCAGATTCAGCAAGAAATTCCAGAGGAAAATGATAAAATT ATGCAGGGGAGACAAAGCTGTGTCTTCTGGAATGCTGTTCTCTTCATTCATAAGCTCAAACTCAAGCTGGAGGCGATTGAGAGAGAGTATTCAAATCTATTGGCTGCGAAAAGAGAAATCTTGAACAACTCTGTGAAGTCTTTTCATTTCCCCAAGGAGGTGGAGGTGGAGAAGATTGGAAAAGAATTTAGAGTGAGATTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTTTTGGAGGCGTTTGACAAAATGGGTCTAAATGTTCTTGAAGCTAGAGTTTCGTGTACGGATTGTTTTTCCATGGAAGCCGTTGCTGTAGCTGAAGTTGAACAATCGCTTGATGTAAGAGACATAAGGGAAGCTATTAACGTAGCCATTGATGGGAAATTGTTAGCTGCAAATCAGATTCAGCAAGAAATTCCAGAGGAAAATGATAAAATT MQGRQSCVFWNAVLFIHKLKLKLEAIEREYSNLLAAKREILNNSVKSFHFPKEVEVEKIGKEFRVRLRCEKGGDRLVSVLEAFDKMGLNVLEARVSCTDCFSMEAVAVAEVEQSLDVRDIREAINVAIDGKLLAANQIQQEIPEENDKI Homology
BLAST of MS010921 vs. NCBI nr
Match: XP_022142089.1 (uncharacterized protein LOC111012303 [Momordica charantia]) HSP 1 Score: 283.9 bits (725), Expect = 8.1e-73 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of MS010921 vs. NCBI nr
Match: KAG6581368.1 (hypothetical protein SDJN03_21370, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54 Identity = 113/149 (75.84%), Postives = 133/149 (89.26%), Query Frame = 0
BLAST of MS010921 vs. NCBI nr
Match: XP_022978770.1 (uncharacterized protein LOC111478631 [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 112/147 (76.19%), Postives = 132/147 (89.80%), Query Frame = 0
BLAST of MS010921 vs. NCBI nr
Match: XP_023544520.1 (uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.5 bits (558), Expect = 1.9e-53 Identity = 111/147 (75.51%), Postives = 132/147 (89.80%), Query Frame = 0
BLAST of MS010921 vs. NCBI nr
Match: KAG7034655.1 (hypothetical protein SDJN02_04385, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.8 bits (556), Expect = 3.2e-53 Identity = 111/147 (75.51%), Postives = 131/147 (89.12%), Query Frame = 0
BLAST of MS010921 vs. ExPASy TrEMBL
Match: A0A6J1CKK9 (uncharacterized protein LOC111012303 OS=Momordica charantia OX=3673 GN=LOC111012303 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73 Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of MS010921 vs. ExPASy TrEMBL
Match: A0A6J1IR65 (uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54 Identity = 112/147 (76.19%), Postives = 132/147 (89.80%), Query Frame = 0
BLAST of MS010921 vs. ExPASy TrEMBL
Match: A0A6J1ED01 (uncharacterized protein LOC111433204 OS=Cucurbita moschata OX=3662 GN=LOC111433204 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.5e-53 Identity = 110/147 (74.83%), Postives = 131/147 (89.12%), Query Frame = 0
BLAST of MS010921 vs. ExPASy TrEMBL
Match: A0A5A7UBN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008340 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.0e-49 Identity = 108/148 (72.97%), Postives = 125/148 (84.46%), Query Frame = 0
BLAST of MS010921 vs. ExPASy TrEMBL
Match: E5GC31 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 4.0e-49 Identity = 108/148 (72.97%), Postives = 125/148 (84.46%), Query Frame = 0
BLAST of MS010921 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.1 bits (235), Expect = 5.0e-20 Identity = 53/125 (42.40%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of MS010921 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.6e-08 Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = 0
BLAST of MS010921 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators ) HSP 1 Score: 54.7 bits (130), Expect = 7.5e-08 Identity = 40/127 (31.50%), Postives = 69/127 (54.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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