![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS010900 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCTCCCGTTACTGAAGCTCGGAACGCTCGCGTTGAAAACTCTGAGCAAGCCACTCGGTAACAGGCTCAAGACGCAAGCTGCGAGGCACCCCAGATTTAGGCAGCTCATCATTAACATGGCCCAGGTATGTATTTATACTTACCTACGCATCTGTTCGCATTTTACAAAATAGAAGATCTCTATTGGTGGATTATTATGTACTGATTTGTAGAAGATCATTAGTCGTTCAGCTATTGTTATTGTAACAAATATTCGGTGCCCCTTTCATGGTCTACTTTCCAGTTATTGTTCTGATCATTCATTTTTGCGTTACCTTCTCCTCAAGTAGTTGTGACCGTTGGTTAAGAAGTTCTTCAAACTTACCATCTCAAATGAAATTAAAGAAGCATTCGAACAACTTGAATGCTCATCTAAAATGAAATTAAGAAGCTCTTCAAATTTATCCTCGTCCATTTTAAAGGGGTAAGTTTTAAGGACCAAAGTTGTAAGTTAACCAAAATCAAACTGAAAGGGATCGTTGTGTATTAAAATCTCTGAGCGTTCTCTGGAGATGGTTTAGACTGAATATCTTATTTTACCACTAGATCTAAAAGTTTAAATTGATGGGTTATAGTAAATTGATCATCTTTCATATATTTTCAATGCTCTTCCCCAAGTGTTGACCTCATCAAAGACTATTATTCTGGAAGAGAGACTGTCATATTGAAGTTTGAACCTTGAACCTAATCTACATTGATAATCAGACCCAAAATACTTAACTTACAGCTTTAGTAAATTTAATCATCGAGTTCTAAAAGATTAATAAGAAAATTCATTATAGGTGTTCAGCGGATTATTTGGTATTTTGACAAAGAGTGGAAGGAATGCCTAGTGCATGTTATCTTCAGATAATATCTCTACCAGTTGTTAGTCTGATGAAACGCTTCCTTTGCCTGTCCTCTTTGTTTTGGGTTGAACGGTAAAAGTACTACGTGGGGAGTAGATCTAAAGCAAAACCAACGATTTAGTTTCAAATTCTCTTGTTTTCATTAAATACTTTCATCTTAATTACTTCATTGGTTTCTATTTTTCATTTGGAGAGCCATCTCAACCTTATAGGTCGATTCTATACTCGGAGCAGTTTTCACCCAGATGAGATTTGAATTTGGTAATGACTAAACCAATAGGGTTTTCTGTAGAGGATATTTCAATCAAATAGACGCAAATTTCTAGTTGTGTTGTTTTTTGTCGTGAGAACTGTCTACTTTTCTGTAGGAGGCTGTACTGCTCACGCACAGTGGTGTAACTGTAATATATATTTTCTGTGCTGTTTCAAGCTTCACGCTTATGATAGCAAGCTCCATGTTGCATGTTTGTCTTTGTTTTGTGCATTCACTTACAATTCATCTTCTTAATTTTTTTTCTGTAGGAAACAAAGTTCATTGGTAATAGGAAACAAAGTTCTCCCAAAAGCTAGCATAGGAGTTTATAAAAGCCCTCAAATCTACTACATAGTAGTTGCTTCCCAAAGTTCATTTGAATGTCTTTCTATTTCTTGAAAGTCTCTTTTAGGCACGCTTCGGACTGTAGATAATTAAAAGAATTTTGCCACAGAGTACTAGCTATTTGCTTGGAGGGGTTGCCATACAAAAATTGAGATAAACCACCTTTGATTCTGTCGGGGAACGCACATGATAAGTCAAATGTCCCAAGGTTTCCACCTAAGGCTTAGCTGATAAGAGCATTGGAGGAAAAGCTGCAACGTATCCTCTGCATTTTCTTTGCAGAATAAGCCCCAAAAAGAAAACTCCTATGATAGGATCTGATAGGAAACAGAAATTGAAGTAAAAATTAATAAAAATCTTAACATCTTACCCCTTGGTTTACTATTGACGATTGAATTGAAAAACCAAGCTTTCATTGAGAAGCATGAAGGAAAGCTTTTTTTTTTATTATTATTATTTTTTAATGTTTAGTTTGAAAACCAGCTCTTCTTTTTTCTTTCTAAACCGCTCATTCACTGCTTTGTTAACTGCCAAGATGGCAACAATAATTGGACACTGTCTTTTAATTGCAAACTTAGCTTCAGAAGCAATGCAAGTTTAAACTGTTCTCATTCCATTGGCCAGGACACAAGGACATTTTTTACATGAATAGGTAGCAAAACCTAAGGTCTGAGTTTAATCAATACCAAGGTTAATAATGCATGTTTTAGAACGTTGTGGAACAAGTACAAGAGGTTAGTTTTGAGGGTAGCTCGGCCCTTTTCAAAGAGCTCAACTGTATACCCATCAGGACTAGGAGTGTCACTAGAATCTAGTTGAAAGACCACCTTCCTAATCTTCTCTTCATCTAGCATTCTCTTGAGCCACTATCTTTTTCAGAGATGAGCCTCCAAGCCTCCAATCCAATCCATTCCATCTGGTAATAATCTTTCATCTCAAAAGAGCCTTAAAATAAGCAAGGAACCTGTAACGACTTCATTCTCAAAAAGTAAGCCAGGTCCTTCCTTGAAAGGATGATGCTGGAGAAGAGGTTTTATTAATCCTACCGGAAATAATTTTGTAGAAAGAAGTAGAATTCTCGTTGCCCTGCTTCAACGAGTGCAGCTTTATTTTCGTGGTGCCAAAATATCTCTTCTTTACAGGGAAGCCTCTGTATCTGTGGCTTAAGAGAGAAGTAAACCTTTTTTAAATCTAAGAGCTACCAGTGGAATAAATTTCTTAAGTAATATCCACTTAAGTCGATTGAATACTCCCAAATACTTCTCTATTCCAGGTTTTGTGTTTCTCCTTTACAGACTTCAGCTTCATCATCAATGAGTGCCAGCCCTCCTGTAGCAATGGAGTTTGTCTTAAGCGATCAGTTCTAGTTTGTCCTAATTGTAGATTCTTTAGGAAGTATAATCTTCAAAGTGTTAGTTTGTGTTGATTGTTTATGGAGATATTCAGGTATCAGGATTAAAGAGGGTTCTGATCTAAGCTTGTATATCGCGTACATTACTCTATGAATAATTCTAATGGTTGCATTTCCTCAATGCTAAAACTGACAGTTTAACCATCGGATGACAACACAAATGCAAAGACGCATCTATAGTCATGCAACTGATGTAGAAATTCGCCCCCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTCTTCTCGGTAATAATCATTTTCAAGTAGCATTACTTCCTTTCCTTTTGGTTAAGATAATTTGTGAACTGAAACATACTATATAGCATGCATGTGCTTTTGACCTTTTAGGCTTTTGCAGCAAGTATTAATCAACTATATATTTCACGGATATTTGATCTTGTAATTGGAAACTGGGAGCTCATTTGTGAATCATTGTGCATACTTATTTATTATTTTAAGAAAATGCTGACTAAGTGTCGCAGCAGTTATTTTGGGTTGATTTTACCATCTACCATTGGTTGCATCATGGGTTGGAATACAATCCTTTGACGAACAATATCAAGAGGATAATTTTTTTCCTTGCTTGGGAGTTTGACTTATTCTGCTTGTTTTGCCTGCTTGCAAACTTTTCACCTCTTCATTTTCTTGATCATTTCTCTCGCGTTTTAATATCTGGAAATCTATAGGTAGCAGGAGCGATAGTCGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAGGAAATACGCAGACAAGAAATGGAGGTAATGACGTAGTTATTTTATCAAGTGCCATCAGAGCAGAAAAGAATAAGATCCAGTGAAAATATGTTTTATATATATATATTTGTTTATTGTGTTCTCATGATTGATTGTTTAACCAAAAAAAAAAAACTCTTTTGAAATTTTAGTTTAAGAATAATAATTTCAACATGTGTAATAACATTACCTTTTACAAGTCATTTGAATCATGATCTTTATTTGAAAACAGTATTCAGATAAGCCTTATAGCTTCTTCAAGTTCAGACATTATGAATGGTAAATTTTGCTGATAATATGAACAAGAAGTGAGTTTAAATTTTCCCGAAGGATTGTTTCAAACTTTCATAGTTGGTGGGACTTGCAATTAACGTAATGAACATCAATTATGATATTCATAAATTTAAGAAACTATGGGCATGTTTGGTAGCATTCTCGTTTCTCGTTTCCTCCTTTTTAATAAAGATAAACATAATTGCATTTGGTAACTATTTTTCGTTCTTTATTAGTCAAAAATGATAAAACAATGTTTTTATTTATGCTTTGGAAAAAAATTAGAAACAAGAACAAGAAATAAGAAACTTGATTTTGTTGTTTTTAAAATTTCTATACAATTTTGGGAACGTTAACATGTGTAACAAGAAACATCAATAGTTGCAAATGTTTAAGTTTTTCAATAAAACTGAAAACCAGAAACAAGAAACGGTAATGTTACCAAACGGACTCTACATATCTGTTACTAGAATATGAACCTCAGAAAACTAGTGCTACACTTGTGTCTCTTCCTGTGGTAACCTATTTGAATGGAGTTGAACTGAGGTAAGGTTATGCCGTATCGAAAATGGATTCTTCCACCGTAAGAAATACTATTGTTGGAATGACTGATCAGGGATGGACGACAAAGTGGACTTATTCCCTTAGGGAATCAACTCCTATATTCCTCACCACTTCTAGCTTCACCCATCCAGTAGTGTTCAGCTTTTTCTCTCTTGTACTCCAAAAGAAAAAAGGTTTCCCGTTTTATAATTTTCTGTGATGTGGTTTTATTGTATTAGGCACTGAGGCAAAAAGACGAAAGCTTATTAACAGAAGTGGAACTTTTGAAGCATAAACTTGTAGAATTGGAACAACATGCCAGAGGACGAGGTCTTGGTGGTATTTTGAACTTCAAACATGCTCAAATGGAAAGTGGGAATTCAGCAAAGCCTGCT ATGGTTCTCCCGTTACTGAAGCTCGGAACGCTCGCGTTGAAAACTCTGAGCAAGCCACTCGGTAACAGGCTCAAGACGCAAGCTGCGAGGCACCCCAGATTTAGGCAGCTCATCATTAACATGGCCCAGTTTAACCATCGGATGACAACACAAATGCAAAGACGCATCTATAGTCATGCAACTGATGTAGAAATTCGCCCCCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTCTTCTCGGTAGCAGGAGCGATAGTCGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAGGAAATACGCAGACAAGAAATGGAGGCACTGAGGCAAAAAGACGAAAGCTTATTAACAGAAGTGGAACTTTTGAAGCATAAACTTGTAGAATTGGAACAACATGCCAGAGGACGAGGTCTTGGTGGTATTTTGAACTTCAAACATGCTCAAATGGAAAGTGGGAATTCAGCAAAGCCTGCT ATGGTTCTCCCGTTACTGAAGCTCGGAACGCTCGCGTTGAAAACTCTGAGCAAGCCACTCGGTAACAGGCTCAAGACGCAAGCTGCGAGGCACCCCAGATTTAGGCAGCTCATCATTAACATGGCCCAGTTTAACCATCGGATGACAACACAAATGCAAAGACGCATCTATAGTCATGCAACTGATGTAGAAATTCGCCCCCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTCTTCTCGGTAGCAGGAGCGATAGTCGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAGGAAATACGCAGACAAGAAATGGAGGCACTGAGGCAAAAAGACGAAAGCTTATTAACAGAAGTGGAACTTTTGAAGCATAAACTTGTAGAATTGGAACAACATGCCAGAGGACGAGGTCTTGGTGGTATTTTGAACTTCAAACATGCTCAAATGGAAAGTGGGAATTCAGCAAAGCCTGCT MVLPLLKLGTLALKTLSKPLGNRLKTQAARHPRFRQLIINMAQFNHRMTTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEIRRQEMEALRQKDESLLTEVELLKHKLVELEQHARGRGLGGILNFKHAQMESGNSAKPA Homology
BLAST of MS010900 vs. NCBI nr
Match: XP_022142318.1 (OPA3-like protein [Momordica charantia]) HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of MS010900 vs. NCBI nr
Match: XP_023543237.1 (OPA3-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.3 bits (734), Expect = 8.3e-74 Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of MS010900 vs. NCBI nr
Match: XP_022978773.1 (OPA3-like protein [Cucurbita maxima]) HSP 1 Score: 284.6 bits (727), Expect = 5.4e-73 Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of MS010900 vs. NCBI nr
Match: XP_022925545.1 (OPA3-like protein [Cucurbita moschata]) HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72 Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of MS010900 vs. NCBI nr
Match: KAG7034619.1 (hypothetical protein SDJN02_04349, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72 Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of MS010900 vs. ExPASy Swiss-Prot
Match: Q9P7W0 (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.5e-13 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 0
BLAST of MS010900 vs. ExPASy Swiss-Prot
Match: Q9VCG3 (Putative OPA3-like protein CG13603 OS=Drosophila melanogaster OX=7227 GN=CG13601 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08 Identity = 42/130 (32.31%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of MS010900 vs. ExPASy Swiss-Prot
Match: Q54NW1 (OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08 Identity = 37/124 (29.84%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of MS010900 vs. ExPASy Swiss-Prot
Match: Q641S2 (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of MS010900 vs. ExPASy Swiss-Prot
Match: Q9H6K4 (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of MS010900 vs. ExPASy TrEMBL
Match: A0A6J1CMZ8 (OPA3-like protein OS=Momordica charantia OX=3673 GN=LOC111012461 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of MS010900 vs. ExPASy TrEMBL
Match: A0A6J1IU89 (OPA3-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478633 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73 Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of MS010900 vs. ExPASy TrEMBL
Match: A0A6J1EIB0 (OPA3-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432953 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 5.8e-73 Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of MS010900 vs. ExPASy TrEMBL
Match: A0A0A0KLK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518220 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 2.9e-72 Identity = 150/169 (88.76%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of MS010900 vs. ExPASy TrEMBL
Match: A0A1S3B0B3 (OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103484486 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71 Identity = 150/169 (88.76%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of MS010900 vs. TAIR 10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3) ) HSP 1 Score: 207.6 bits (527), Expect = 7.8e-54 Identity = 119/168 (70.83%), Postives = 135/168 (80.36%), Query Frame = 0
BLAST of MS010900 vs. TAIR 10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3) ) HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|