Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACTCTTTCCAACCCACCAAACACCTTCCCTCCGACAAACACCACCGGAAACTGCACCCTCCCGTCGTTTCCATCCCCCGCACCGGCGGATTTCGCAATCTCACCGGCGATATCGGCCTCGTCTTCCTCATCGACGGCGAAGAAAGCCGGGTTCGCGCCGTGGCCCAACAGGAGCAGTTTCAAAACATGGCTCATACAACACCCACTCCTTGCCAGGACGACGACGGCGTTTTTGGACACC mRNA sequence
ATCACTCTTTCCAACCCACCAAACACCTTCCCTCCGACAAACACCACCGGAAACTGCACCCTCCCGTCGTTTCCATCCCCCGCACCGGCGGATTTCGCAATCTCACCGGCGATATCGGCCTCGTCTTCCTCATCGACGGCGAAGAAAGCCGGGTTCGCGCCGTGGCCCAACAGGAGCAGTTTCAAAACATGGCTCATACAACACCCACTCCTTGCCAGGACGACGACGGCGTTTTTGGACACC Coding sequence (CDS)
ATCACTCTTTCCAACCCACCAAACACCTTCCCTCCGACAAACACCACCGGAAACTGCACCCTCCCGTCGTTTCCATCCCCCGCACCGGCGGATTTCGCAATCTCACCGGCGATATCGGCCTCGTCTTCCTCATCGACGGCGAAGAAAGCCGGGTTCGCGCCGTGGCCCAACAGGAGCAGTTTCAAAACATGGCTCATACAACACCCACTCCTTGCCAGGACGACGACGGCGTTTTTGGACACC Protein sequence
ITLSNPPNTFPPTNTTGNCTLPSFPSPAPADFAISPAISASSSSSTAKKAGFAPWPNRSSFKTWLIQHPLLARTTTAFLDT
Homology
BLAST of MS010897 vs. ExPASy TrEMBL
Match:
A0A0A0LQX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G409500 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 3.5e-07
Identity = 42/81 (51.85%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 1 ITLSNPPNTFPPTNTTGNCTLPSFPSPAPADFAISPAISASSSSSTAKKAGFAPWPNRSS 60 +TLS PPN PP T GNC L + A A ++S S SSST+ AG AP PNR Sbjct: 1 MTLSKPPNKVPPIKTAGNCKL-TLEDLAKASNSLS--TPDSCSSSTSYTAGLAPSPNRRR 60 Query: 61 FKTWLIQHPLLARTTTAFLDT 82 F TWLIQHPLLA T A +T Sbjct: 61 FTTWLIQHPLLANTIAALSET 78
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0LQX8 3.5e-07 51.85 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G409500 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
A T C A C T C T T T C C A A C C C A C C A A A C A C C T T C C C T C C G A C A A A C A C C A C C G G A A A C T G C A C C C T C C C G T C G T T T C C A T C C C C C G C A C C G G C G G A T T T C G C A A T C T C A C C G G C G A T A T C G G C C T C G T C T T C C T C A T C G A C G G C G A A G A A A G C C G G G T T C G C G C C G T G G C C C A A C A G G A G C A G T T T C A A A A C A T G G C T C A T A C A A C A C C C A C T C C T T G C C A G G A C G A C G A C G G C G T T T T T G G A C A C C 20 40 60 80 100 120 140 160 180 200 220 240 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..22
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name Unique Name Type
MS010897.1 MS010897.1 mRNA