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MS010896 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCAAGCGATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTGCCGGTCCTCCGATCCCACGGCGGAGGCCGTCGATGGCGCCGGCAGCAGCGCTGGGGCGGCGAGTGTTCACAAAATGGTGTCCAAAAACGCCGTCGTCGTCCTGGCAAGGAGTGGGTGTTGTATGAGCCATGTTTTGAAACTGCTCCTGTTGGGCCACGGCGCGAACCCGGCTTTCTTCGCCGTCGATGAGGAAGACGAGGCCGATATCGCCGGTGAGATTGCGAAATCCGCCGGTGCGGGGGATGGAAACGACGGGAGGGTGCAGTTTCCGGTGGTGTTTGTCGGAGGGAAGGTGTTTGGTGGGTTGGAAAGAGTGATGGCAGCTCATATCTCTGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTT ATGCACCAAGCGATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTGCCGGTCCTCCGATCCCACGGCGGAGGCCGTCGATGGCGCCGGCAGCAGCGCTGGGGCGGCGAGTGTTCACAAAATGGTGTCCAAAAACGCCGTCGTCGTCCTGGCAAGGAGTGGGTGTTGTATGAGCCATGTTTTGAAACTGCTCCTGTTGGGCCACGGCGCGAACCCGGCTTTCTTCGCCGTCGATGAGGAAGACGAGGCCGATATCGCCGGTGAGATTGCGAAATCCGCCGGTGCGGGGGATGGAAACGACGGGAGGGTGCAGTTTCCGGTGGTGTTTGTCGGAGGGAAGGTGTTTGGTGGGTTGGAAAGAGTGATGGCAGCTCATATCTCTGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTT ATGCACCAAGCGATTCCGTACAGGACGTGGATTCCGGCCGCCGCCTCCTGCCGGTCCTCCGATCCCACGGCGGAGGCCGTCGATGGCGCCGGCAGCAGCGCTGGGGCGGCGAGTGTTCACAAAATGGTGTCCAAAAACGCCGTCGTCGTCCTGGCAAGGAGTGGGTGTTGTATGAGCCATGTTTTGAAACTGCTCCTGTTGGGCCACGGCGCGAACCCGGCTTTCTTCGCCGTCGATGAGGAAGACGAGGCCGATATCGCCGGTGAGATTGCGAAATCCGCCGGTGCGGGGGATGGAAACGACGGGAGGGTGCAGTTTCCGGTGGTGTTTGTCGGAGGGAAGGTGTTTGGTGGGTTGGAAAGAGTGATGGCAGCTCATATCTCTGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTT MHQAIPYRTWIPAAASCRSSDPTAEAVDGAGSSAGAASVHKMVSKNAVVVLARSGCCMSHVLKLLLLGHGANPAFFAVDEEDEADIAGEIAKSAGAGDGNDGRVQFPVVFVGGKVFGGLERVMAAHISGELVPALKDAGALWL Homology
BLAST of MS010896 vs. NCBI nr
Match: XP_022142262.1 (glutaredoxin-C9 [Momordica charantia]) HSP 1 Score: 279.6 bits (714), Expect = 1.5e-71 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS010896 vs. NCBI nr
Match: XP_022978780.1 (glutaredoxin-C9-like [Cucurbita maxima]) HSP 1 Score: 209.1 bits (531), Expect = 2.4e-50 Identity = 115/144 (79.86%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of MS010896 vs. NCBI nr
Match: XP_023543691.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50 Identity = 115/144 (79.86%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of MS010896 vs. NCBI nr
Match: XP_022926101.1 (monothiol glutaredoxin-S9-like [Cucurbita moschata] >KAG6581333.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034617.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50 Identity = 115/144 (79.86%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of MS010896 vs. NCBI nr
Match: XP_038881313.1 (glutaredoxin-C9-like [Benincasa hispida]) HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49 Identity = 109/146 (74.66%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of MS010896 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25 Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of MS010896 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22 Identity = 73/147 (49.66%), Postives = 88/147 (59.86%), Query Frame = 0
BLAST of MS010896 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21 Identity = 63/136 (46.32%), Postives = 82/136 (60.29%), Query Frame = 0
BLAST of MS010896 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.2e-21 Identity = 69/156 (44.23%), Postives = 86/156 (55.13%), Query Frame = 0
BLAST of MS010896 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 6.1e-20 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of MS010896 vs. ExPASy TrEMBL
Match: A0A6J1CM95 (glutaredoxin-C9 OS=Momordica charantia OX=3673 GN=LOC111012425 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.1e-72 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS010896 vs. ExPASy TrEMBL
Match: A0A6J1IR73 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111478640 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50 Identity = 115/144 (79.86%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of MS010896 vs. ExPASy TrEMBL
Match: A0A6J1EDX5 (monothiol glutaredoxin-S9-like OS=Cucurbita moschata OX=3662 GN=LOC111433316 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50 Identity = 115/144 (79.86%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of MS010896 vs. ExPASy TrEMBL
Match: U3RBI2 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX1 PE=2 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46 Identity = 104/145 (71.72%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of MS010896 vs. ExPASy TrEMBL
Match: A0A6J1KW71 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111496967 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 7.4e-45 Identity = 105/146 (71.92%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of MS010896 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 9.0e-27 Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of MS010896 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein ) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of MS010896 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of MS010896 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17 Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of MS010896 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 9.3e-16 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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