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MS010874 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTACAAATTTTAAAAATTAAAATTAAAACAAAACCCTAATCTGAATCATCTGTTTTAAAATATAATTTAGTACTTGTAGCTTCTAAGGCCTAAAACCTAAATTTGAATTTGATCCTTTTTTTCTTCTCCCGTTTCAAAGCAGTGAGGAATGTGGCGAAATTGAAAACTTAAAACAAGTACTGTTTTTGAGTTTTGGAAATTAATAATTAACTTTTTAAGTTAGCTCAAATAATCAAATTCATTCTACATTACATTATGTACAGTGTGTTTGGAGATCTATTATTCCATATTTTATAAATATTTTTCCACTAGTTTGAAGTACTTGTGAAGTGAACACAGTATATATATTTTTCACTACTTAATTAAGAATAATACTTTTTTCTTTGTTTCACTACATATGGAATGAAGTGTTAGGTGAGTTAATTTCAATTTTAAACTTTCCTTAAACTTGTGTATATAGTTAAATTAATACTCTTGATTAATTATTTTTTATTTATGATTTATAAACACTTGTGGCGTGTTTTTGTTAAGTGATTTACTATATTAATTGTCATTTTAGAATATATAGCATTTTGAAAGAAGAAAAATTATACATTTTGAGGGGAATTCAAGATATCTTGTTTTAGTACCGTATTAAACCATCAATAAATTCAAAAGCTTAAATTGATGTGTACTTAATATTTTATATATGGAAATTTTCTTATAAAACAAAATAAGTGTGTTTTGTTGAGGTAGGGGAGGTTACATTATTATTATTTAAGGGGAGTATACTTGAATTAGATAATCAATTTTAACTTGAAACTTTTAATTTTTTTTTCAATTTAAACTTATTATACTTGAACAAAAGTGTTCAATTAGTTAAATTTCTATTTTTCTTTGAAGATTATAATTAGTTTGATTTGGGCACTTTCTTTCCTTGTTAAGTGTATTTTGGGCGTTTCATTATAGTCGACATTTGTTTGGTTTATGAACAAATTTTCTAATTTAATTTTTGAAAAAAAGGTTGAAATTGGTTGATAATGTGTTTGACCATATTAGCTAAACTATTAAATTTCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACC ATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACC ATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACC MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQSST Homology
BLAST of MS010874 vs. NCBI nr
Match: XP_022142195.1 (squamosa promoter-binding protein 1 [Momordica charantia]) HSP 1 Score: 276.2 bits (705), Expect = 1.6e-70 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of MS010874 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida]) HSP 1 Score: 187.2 bits (474), Expect = 9.7e-44 Identity = 103/128 (80.47%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of MS010874 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 4.1e-42 Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of MS010874 vs. NCBI nr
Match: KAG7026565.1 (Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.0 bits (458), Expect = 7.0e-42 Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of MS010874 vs. NCBI nr
Match: XP_022926740.1 (squamosa promoter-binding-like protein 3 [Cucurbita moschata] >XP_022926741.1 squamosa promoter-binding-like protein 3 [Cucurbita moschata]) HSP 1 Score: 180.6 bits (457), Expect = 9.1e-42 Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of MS010874 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30 Identity = 72/121 (59.50%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of MS010874 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 5.4e-29 Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of MS010874 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28 Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of MS010874 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 7.8e-28 Identity = 70/121 (57.85%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of MS010874 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27 Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS010874 vs. ExPASy TrEMBL
Match: A0A6J1CK81 (squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111012368 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 7.7e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of MS010874 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42 Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of MS010874 vs. ExPASy TrEMBL
Match: A0A6J1EFR3 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433770 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 4.4e-42 Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of MS010874 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41 Identity = 102/139 (73.38%), Postives = 114/139 (82.01%), Query Frame = 0
BLAST of MS010874 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.2e-40 Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of MS010874 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 ) HSP 1 Score: 128.6 bits (322), Expect = 3.8e-30 Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of MS010874 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 ) HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29 Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of MS010874 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 ) HSP 1 Score: 124.0 bits (310), Expect = 9.4e-29 Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS010874 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 ) HSP 1 Score: 124.0 bits (310), Expect = 9.4e-29 Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS010874 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein ) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27 Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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