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MS010872 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGGCGGTTCAGGAGAGGAGATTGAAGGGGAATTTGCAAGTGCAAAATCAGGTTCAAGCACAGCCTCAGCCTCAGAAATGCCCTCGCTGTGATTCTCTCAACACCAAGTTTTGTTATTACAACAACTATAGTTTGTCTCAGCCTCGCTATCTTTGCAAGACCTGTAGAAGGTATTGGACTCAAGGTGGTACTCTCCGGAACGTCCCCGTCGGTGGCGGTTGTCGGAAGGGTAAACGACCTAAACCCTCTTCCGACAACACAAGGTCGACACAACCGCCACTGCCACCGCCACCGCGACCACCAGTAGTCCAACAAATTAGTTTATCGGCTACTCCACAACCCATAATCTTCTCCGGTACTCCCATCATGACCACATCGTCGTCCTACTTCAATCCTGGTGAGCATCAGGGACGGAGCTAGAAATTTTCATAGCATTTTACTCTTTTACATATAATCTTTCAAGGCAACGAGATAAATTAGAGAGAAAATTTTTAAGTTAAATTTTTTAGAAAAATCTAAGAGGAAGGTTTTTCTTTCCAAAAAATTGAAGAGAATTTGATTAAGGGGATGGATACCTTATTGAGCTATGTTTAAATTGAATTGACTTAAAAGAGAAGAAAGTTTCAATCTTTTGAATGAAAAATGGAATTTTGCTGATGGGTCTTGAATTTGATGCAGGTGAGGAAGTGGGGTCATCTTCGAGGTGGGTAAATTCATTTGTATCATCGCAAATAGGGCAGTCTCAAATTCAAGCATCTGAAATAATCTATGAAATGATGGATCATCATCAGTCAGCTGGAAAGGCAGCCGTGAATAATTCATCTTCTCCGGCGACAGCGTGGCCTGAAACCTACATCAATAACAATTCTAGCAACCCTTCGGCCGCCGTGGGTGACACCATTGTTTGGACCTCCGGCAACAGCACCACCGCAGTTGACCAATCTTCTTTGGATCCAAATCAGTGGCCGGATTATATGCGGGGATTTTGTCCGCCTCCA AAGGCGGTTCAGGAGAGGAGATTGAAGGGGAATTTGCAAGTGCAAAATCAGGTTCAAGCACAGCCTCAGCCTCAGAAATGCCCTCGCTGTGATTCTCTCAACACCAAGTTTTGTTATTACAACAACTATAGTTTGTCTCAGCCTCGCTATCTTTGCAAGACCTGTAGAAGGTATTGGACTCAAGGTGGTACTCTCCGGAACGTCCCCGTCGGTGGCGGTTGTCGGAAGGGTAAACGACCTAAACCCTCTTCCGACAACACAAGGTCGACACAACCGCCACTGCCACCGCCACCGCGACCACCAGTAGTCCAACAAATTAGTTTATCGGCTACTCCACAACCCATAATCTTCTCCGGTACTCCCATCATGACCACATCGTCGTCCTACTTCAATCCTGGTGAGGAAGTGGGGTCATCTTCGAGGTGGGTAAATTCATTTGTATCATCGCAAATAGGGCAGTCTCAAATTCAAGCATCTGAAATAATCTATGAAATGATGGATCATCATCAGTCAGCTGGAAAGGCAGCCGTGAATAATTCATCTTCTCCGGCGACAGCGTGGCCTGAAACCTACATCAATAACAATTCTAGCAACCCTTCGGCCGCCGTGGGTGACACCATTGTTTGGACCTCCGGCAACAGCACCACCGCAGTTGACCAATCTTCTTTGGATCCAAATCAGTGGCCGGATTATATGCGGGGATTTTGTCCGCCTCCA AAGGCGGTTCAGGAGAGGAGATTGAAGGGGAATTTGCAAGTGCAAAATCAGGTTCAAGCACAGCCTCAGCCTCAGAAATGCCCTCGCTGTGATTCTCTCAACACCAAGTTTTGTTATTACAACAACTATAGTTTGTCTCAGCCTCGCTATCTTTGCAAGACCTGTAGAAGGTATTGGACTCAAGGTGGTACTCTCCGGAACGTCCCCGTCGGTGGCGGTTGTCGGAAGGGTAAACGACCTAAACCCTCTTCCGACAACACAAGGTCGACACAACCGCCACTGCCACCGCCACCGCGACCACCAGTAGTCCAACAAATTAGTTTATCGGCTACTCCACAACCCATAATCTTCTCCGGTACTCCCATCATGACCACATCGTCGTCCTACTTCAATCCTGGTGAGGAAGTGGGGTCATCTTCGAGGTGGGTAAATTCATTTGTATCATCGCAAATAGGGCAGTCTCAAATTCAAGCATCTGAAATAATCTATGAAATGATGGATCATCATCAGTCAGCTGGAAAGGCAGCCGTGAATAATTCATCTTCTCCGGCGACAGCGTGGCCTGAAACCTACATCAATAACAATTCTAGCAACCCTTCGGCCGCCGTGGGTGACACCATTGTTTGGACCTCCGGCAACAGCACCACCGCAGTTGACCAATCTTCTTTGGATCCAAATCAGTGGCCGGATTATATGCGGGGATTTTGTCCGCCTCCA KAVQERRLKGNLQVQNQVQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRKGKRPKPSSDNTRSTQPPLPPPPRPPVVQQISLSATPQPIIFSGTPIMTTSSSYFNPGEEVGSSSRWVNSFVSSQIGQSQIQASEIIYEMMDHHQSAGKAAVNNSSSPATAWPETYINNNSSNPSAAVGDTIVWTSGNSTTAVDQSSLDPNQWPDYMRGFCPPP Homology
BLAST of MS010872 vs. NCBI nr
Match: XP_022142114.1 (dof zinc finger protein DOF1.4-like [Momordica charantia] >XP_022142115.1 dof zinc finger protein DOF1.4-like [Momordica charantia]) HSP 1 Score: 471.1 bits (1211), Expect = 5.7e-129 Identity = 235/239 (98.33%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of MS010872 vs. NCBI nr
Match: XP_038882844.1 (dof zinc finger protein DOF1.4-like [Benincasa hispida]) HSP 1 Score: 283.1 bits (723), Expect = 2.2e-72 Identity = 157/242 (64.88%), Postives = 185/242 (76.45%), Query Frame = 0
BLAST of MS010872 vs. NCBI nr
Match: XP_023003351.1 (dof zinc finger protein DOF5.6-like [Cucurbita maxima]) HSP 1 Score: 280.4 bits (716), Expect = 1.4e-71 Identity = 164/245 (66.94%), Postives = 184/245 (75.10%), Query Frame = 0
BLAST of MS010872 vs. NCBI nr
Match: XP_022926378.1 (dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-70 Identity = 165/247 (66.80%), Postives = 183/247 (74.09%), Query Frame = 0
BLAST of MS010872 vs. NCBI nr
Match: KAG7026567.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275.8 bits (704), Expect = 3.5e-70 Identity = 164/246 (66.67%), Postives = 180/246 (73.17%), Query Frame = 0
BLAST of MS010872 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 2.3e-27 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MS010872 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.8e-25 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MS010872 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.6e-25 Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of MS010872 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of MS010872 vs. ExPASy Swiss-Prot
Match: Q6K537 (Dof zinc finger protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF3 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of MS010872 vs. ExPASy TrEMBL
Match: A0A6J1CK05 (dof zinc finger protein DOF1.4-like OS=Momordica charantia OX=3673 GN=LOC111012319 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 2.8e-129 Identity = 235/239 (98.33%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of MS010872 vs. ExPASy TrEMBL
Match: A0A6J1KP01 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 7.0e-72 Identity = 164/245 (66.94%), Postives = 184/245 (75.10%), Query Frame = 0
BLAST of MS010872 vs. ExPASy TrEMBL
Match: A0A6J1EHW0 (dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111433543 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.3e-70 Identity = 165/247 (66.80%), Postives = 183/247 (74.09%), Query Frame = 0
BLAST of MS010872 vs. ExPASy TrEMBL
Match: A0A1S3B0F1 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 1.1e-64 Identity = 158/254 (62.20%), Postives = 179/254 (70.47%), Query Frame = 0
BLAST of MS010872 vs. ExPASy TrEMBL
Match: A0A5A7UGN7 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007560 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 2.4e-64 Identity = 155/254 (61.02%), Postives = 176/254 (69.29%), Query Frame = 0
BLAST of MS010872 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MS010872 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MS010872 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 ) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26 Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of MS010872 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 ) HSP 1 Score: 115.2 bits (287), Expect = 7.5e-26 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of MS010872 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 ) HSP 1 Score: 114.0 bits (284), Expect = 1.7e-25 Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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