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MS010871 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATAACCACGAATATGATCTCCCCCCATTCCCATTCCCCAATCTTTACTCCGCCGCCGCTCCCACCGGCGGCATTTTCCTCTCTCCTCAAAACTCCTCCGCCCATCTCCCCATTTGCCAGCCACTGTTCGGATTCTCCTCCATAGCCACCCCGCAGTCGTACCTTTTGGGTACTCATGAACAACAACAACTGCCCACCGCCGCCAGCTCCCAGCTGTTTCCACCACCCTACGCTTTCAACCCCACTAATAATTCTGTGTTGCTCTCCAAAGATAATGAGGCTGCTGGAAGAAGGGTTCTGGATGCGTGGAGCACCAAGGTCGCCAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTGAATAGAGCCTCTTCTTCTTCTTCTTTCTCTGGTTTTGGTTATGGTACTGAAGAATATTCTTCGTCCAAGGGAGTAACCGTAACCACCAACACCCTCTCATCCACCAACTCTGATTCTCCCAACAATAGAACCCACAATCTCTTCACCTTCTGCACTCCAGATAAGAAGGTGCTCTCATGGGACTCTCCCTCTCTCTCTCTCTCTTTATCAACTGCTTAATTTAAAGTTTGGATTTTTATTTTGTTTGTTTGGTAAAAATGTCTTCTTTTTTTGTTTTGTCGGGGGTAGATATTGAGATTGAGAATGCTGCTGAAGAAAGAGCTGAAGAACAGTGATGTTGGGTCTTTGGGCAGGATCGTTCTCCCCAAGGTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACACTTCTTACTTACTATGATCTTCCAATAGAACAGTGAAAAAGAAAAACATGCAAATGGAAAAAAAAAAATCCCACTTCCCCACAACAACCCCCCAAATAAAATAGAAAACAAAGATGCTAAAAGAAGGGGAAAAAACCCTAATAATTATTGTTGTGTTGGTGAAATTTAGATTAGAAACAAAACAATCCGACCATTTTATTTTTGTTTAGGACGGAGACAAAAAAAACTTGAAAAATCTTTAAAAAAGTTTTCATTTTTCAAATATAGTTTTGTTTAATCTAAGAAAAATTAAGGAGACAATTACCACTCTCTCTTTCATTTGGGAGCATTTTGTTTTTACAGAGGGAGGCCGAAGAGAATCTTCCATTGCTAACTGATAAGGAAGGGATCCAAGTTACGATAAGAGATGTGAACTCGCACAGAAAATGGGCCATGAAATACAAGTAATTAATTTTCTCTTCCTCTTTTTAATTACTGCATCCTTTTCCTTAATTAACCCTTTCAAATTCCTCTCGAGTTTAATTATAGGTACTGGGCAAACAACAGAAGTAGAATGTATGTGCTGGAAAACACAGGTTCCCAATCCCACAAACTAACAATATTCTCCAAATCATGGCTTCAAAATTCTTAAATTTTCCAATGTTGAGAGATTTTTTTTCTTTTTTATGTAGGGGATTTCGTTAGACAAAATGGATTGGTAATCGGAGATGCAATGACCCTTTACGAGGATGAATGCAAGAACCTCGTGAGTTTCCTTTTTATTTATTTTTCAAATTTGACTTTTTTTCTTTTTTTTTTTTAAGACTTGCAATGAAAATAAGTAAGATAATAATGATGAGTGAGTTTTCCTAATATGGTGGTGATGGTAACGCTTGGAAAGACGGGTAGAGAGAGATAAGACAGAAGAAAAAAATAAAATAATAATATGGACGAAAATAACACTGGTTTTAGACACGTAAAATACGATGTGTTGTCTTCTGTTCCTATAATTACTTTCTTTTTGACAGATAGGATTTCCTATTATGTGGGGCCATCCAAGCCGTCCGTTTCAATTTTCTTCCCCTCCAATCACCGTTCATCTTTCTTTTCTTCACTATAATTCAAATGACATGATTTCTTTTAAATATAGCTTAAATTTAACCTTTTTTTATGCATTTTATTTTATATTTGAATTTCGATTATGTTACTTTCGTCAAATTTGAAATTTTGCACTATATTTGTAAACACATATTTATTTTTAACTCTTTCTAAATATATAGGTGGGAGGTCAAATTTTTAACTTTAAGAGATAATTAATAAGTGAGTGTCTTATTTATTGGTCGATGACAGTCTCTTTCTTTTTGTTTCTATTATTATTTTTCTTGGAGGACTGACAAACAACCGTTTGAAGACTCTTGTATTGGAGAAATTTTGAGAGGATCTAGAATGATATATGTTTTCTAATCATGGTTAATTAAAGTTGGTTTAAATACTATTTTGATTTTTTTTTTTTTTTTTTTACTTTGGTCCATTTCGATCCGTACACTTTCAGAACATTAATTTTAGTTCACACGCTTTGAAAATGTTCATTTTTATTTGATTTATTTCGATCACAATTTTAACATATGACATTTTACTCACTAAATTCCTTGAAATGTAGTCATAAACGGATTTTCTCATAGATAAATTTTGTTTAACAATTTACAAATATGGACCAATATGATTACTTTTGAAAGTATAGGTGTAACTCATTGGTAATTGACATATATCTATTACGAAGAAATCAGGAATTCAAATCCCCTACCCCATTTATTGTAATCGAAAAAATCACTTTTAAAGAATAAAATTAAAGTTGTATGAAGTTGTATTTTCTCTTCCACATTTTTTGACTAGCCTTCTTCATGAATCATAGCACATCTCAAAAGTTATAATTCATATTTTGTTATTAAATTTCTTCTTATTGTGTGGTTGATCAACTGGATATGATGTAAATGATGAATACACAGTACGTGACAATACAAAAAGGTGAGAAGCATTCAAGCATGGAAGAGAAGCAGAGAATTGTGCATGGAGAAGAGTCAGCCAAAATTTACACAAACAATAACATTACCATTAAAGACGAAGAAGAGGAAGCATCTTTAGCTCTATTGATTGAAGAGCTCAAACCGCCGCCCAATCTCACACTCTCACACAGCTCCGATTCCGGCTGCACGACAGCCAGCTTCGAAAGAGGCTGCTACATCACCCGCCGCCAGTCCACGGCGGCGCGTGGGAAAGGGAAGGAGGAGGATTTAGACCACTACCAAAGTATAAATAATAATTATAATAATAGTACTGGGTTTGAGGATTGCTTTGGAGGGCTGGATCCGCTGCCGGAAGTCGGTCGATTCAACTGCTCTCTTTTCGACTACTTAAGCAACGACAGAACG AATAACCACGAATATGATCTCCCCCCATTCCCATTCCCCAATCTTTACTCCGCCGCCGCTCCCACCGGCGGCATTTTCCTCTCTCCTCAAAACTCCTCCGCCCATCTCCCCATTTGCCAGCCACTGTTCGGATTCTCCTCCATAGCCACCCCGCAGTCGTACCTTTTGGGTACTCATGAACAACAACAACTGCCCACCGCCGCCAGCTCCCAGCTGTTTCCACCACCCTACGCTTTCAACCCCACTAATAATTCTGTGTTGCTCTCCAAAGATAATGAGGCTGCTGGAAGAAGGGTTCTGGATGCGTGGAGCACCAAGGTCGCCAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTGAATAGAGCCTCTTCTTCTTCTTCTTTCTCTGGTTTTGGTTATGGTACTGAAGAATATTCTTCGTCCAAGGGAGTAACCGTAACCACCAACACCCTCTCATCCACCAACTCTGATTCTCCCAACAATAGAACCCACAATCTCTTCACCTTCTGCACTCCAGATAAGAAGATATTGAGATTGAGAATGCTGCTGAAGAAAGAGCTGAAGAACAGTGATGTTGGGTCTTTGGGCAGGATCGTTCTCCCCAAGAGGGAGGCCGAAGAGAATCTTCCATTGCTAACTGATAAGGAAGGGATCCAAGTTACGATAAGAGATGTGAACTCGCACAGAAAATGGGCCATGAAATACAAGTACTGGGCAAACAACAGAAGTAGAATGTATGTGCTGGAAAACACAGGGGATTTCGTTAGACAAAATGGATTGGTAATCGGAGATGCAATGACCCTTTACGAGGATGAATGCAAGAACCTCTACGTGACAATACAAAAAGGTGAGAAGCATTCAAGCATGGAAGAGAAGCAGAGAATTGTGCATGGAGAAGAGTCAGCCAAAATTTACACAAACAATAACATTACCATTAAAGACGAAGAAGAGGAAGCATCTTTAGCTCTATTGATTGAAGAGCTCAAACCGCCGCCCAATCTCACACTCTCACACAGCTCCGATTCCGGCTGCACGACAGCCAGCTTCGAAAGAGGCTGCTACATCACCCGCCGCCAGTCCACGGCGGCGCGTGGGAAAGGGAAGGAGGAGGATTTAGACCACTACCAAAGTATAAATAATAATTATAATAATAGTACTGGGTTTGAGGATTGCTTTGGAGGGCTGGATCCGCTGCCGGAAGTCGGTCGATTCAACTGCTCTCTTTTCGACTACTTAAGCAACGACAGAACG AATAACCACGAATATGATCTCCCCCCATTCCCATTCCCCAATCTTTACTCCGCCGCCGCTCCCACCGGCGGCATTTTCCTCTCTCCTCAAAACTCCTCCGCCCATCTCCCCATTTGCCAGCCACTGTTCGGATTCTCCTCCATAGCCACCCCGCAGTCGTACCTTTTGGGTACTCATGAACAACAACAACTGCCCACCGCCGCCAGCTCCCAGCTGTTTCCACCACCCTACGCTTTCAACCCCACTAATAATTCTGTGTTGCTCTCCAAAGATAATGAGGCTGCTGGAAGAAGGGTTCTGGATGCGTGGAGCACCAAGGTCGCCAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTGAATAGAGCCTCTTCTTCTTCTTCTTTCTCTGGTTTTGGTTATGGTACTGAAGAATATTCTTCGTCCAAGGGAGTAACCGTAACCACCAACACCCTCTCATCCACCAACTCTGATTCTCCCAACAATAGAACCCACAATCTCTTCACCTTCTGCACTCCAGATAAGAAGATATTGAGATTGAGAATGCTGCTGAAGAAAGAGCTGAAGAACAGTGATGTTGGGTCTTTGGGCAGGATCGTTCTCCCCAAGAGGGAGGCCGAAGAGAATCTTCCATTGCTAACTGATAAGGAAGGGATCCAAGTTACGATAAGAGATGTGAACTCGCACAGAAAATGGGCCATGAAATACAAGTACTGGGCAAACAACAGAAGTAGAATGTATGTGCTGGAAAACACAGGGGATTTCGTTAGACAAAATGGATTGGTAATCGGAGATGCAATGACCCTTTACGAGGATGAATGCAAGAACCTCTACGTGACAATACAAAAAGGTGAGAAGCATTCAAGCATGGAAGAGAAGCAGAGAATTGTGCATGGAGAAGAGTCAGCCAAAATTTACACAAACAATAACATTACCATTAAAGACGAAGAAGAGGAAGCATCTTTAGCTCTATTGATTGAAGAGCTCAAACCGCCGCCCAATCTCACACTCTCACACAGCTCCGATTCCGGCTGCACGACAGCCAGCTTCGAAAGAGGCTGCTACATCACCCGCCGCCAGTCCACGGCGGCGCGTGGGAAAGGGAAGGAGGAGGATTTAGACCACTACCAAAGTATAAATAATAATTATAATAATAGTACTGGGTTTGAGGATTGCTTTGGAGGGCTGGATCCGCTGCCGGAAGTCGGTCGATTCAACTGCTCTCTTTTCGACTACTTAAGCAACGACAGAACG NNHEYDLPPFPFPNLYSAAAPTGGIFLSPQNSSAHLPICQPLFGFSSIATPQSYLLGTHEQQQLPTAASSQLFPPPYAFNPTNNSVLLSKDNEAAGRRVLDAWSTKVARSKRRLARQRTLTLNRASSSSSFSGFGYGTEEYSSSKGVTVTTNTLSSTNSDSPNNRTHNLFTFCTPDKKILRLRMLLKKELKNSDVGSLGRIVLPKREAEENLPLLTDKEGIQVTIRDVNSHRKWAMKYKYWANNRSRMYVLENTGDFVRQNGLVIGDAMTLYEDECKNLYVTIQKGEKHSSMEEKQRIVHGEESAKIYTNNNITIKDEEEEASLALLIEELKPPPNLTLSHSSDSGCTTASFERGCYITRRQSTAARGKGKEEDLDHYQSINNNYNNSTGFEDCFGGLDPLPEVGRFNCSLFDYLSNDRT Homology
BLAST of MS010871 vs. NCBI nr
Match: XP_022142260.1 (B3 domain-containing transcription factor LEC2-like [Momordica charantia]) HSP 1 Score: 378.6 bits (971), Expect = 6.8e-101 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of MS010871 vs. NCBI nr
Match: XP_022925980.1 (B3 domain-containing transcription factor LEC2 [Cucurbita moschata]) HSP 1 Score: 363.6 bits (932), Expect = 2.3e-96 Identity = 243/469 (51.81%), Postives = 278/469 (59.28%), Query Frame = 0
BLAST of MS010871 vs. NCBI nr
Match: XP_022978700.1 (B3 domain-containing transcription factor LEC2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 360.5 bits (924), Expect = 1.9e-95 Identity = 242/465 (52.04%), Postives = 282/465 (60.65%), Query Frame = 0
BLAST of MS010871 vs. NCBI nr
Match: XP_023544601.1 (B3 domain-containing transcription factor LEC2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357.8 bits (917), Expect = 1.2e-94 Identity = 241/480 (50.21%), Postives = 281/480 (58.54%), Query Frame = 0
BLAST of MS010871 vs. NCBI nr
Match: KAG7034599.1 (B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357.8 bits (917), Expect = 1.2e-94 Identity = 243/479 (50.73%), Postives = 278/479 (58.04%), Query Frame = 0
BLAST of MS010871 vs. ExPASy Swiss-Prot
Match: Q1PFR7 (B3 domain-containing transcription factor LEC2 OS=Arabidopsis thaliana OX=3702 GN=LEC2 PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.8e-38 Identity = 116/252 (46.03%), Postives = 154/252 (61.11%), Query Frame = 0
BLAST of MS010871 vs. ExPASy Swiss-Prot
Match: Q9LW31 (B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 GN=FUS3 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 5.2e-27 Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of MS010871 vs. ExPASy Swiss-Prot
Match: Q01593 (B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 GN=ABI3 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.3e-25 Identity = 54/93 (58.06%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of MS010871 vs. ExPASy Swiss-Prot
Match: Q7XKC5 (B3 domain-containing protein Os04g0676600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0676600 PE=2 SV=2) HSP 1 Score: 110.9 bits (276), Expect = 3.5e-23 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of MS010871 vs. ExPASy Swiss-Prot
Match: A4LBC0 (B3 domain-containing protein LFL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LFL1 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.5e-23 Identity = 77/216 (35.65%), Postives = 114/216 (52.78%), Query Frame = 0
BLAST of MS010871 vs. ExPASy TrEMBL
Match: A0A6J1CKF6 (B3 domain-containing transcription factor LEC2-like OS=Momordica charantia OX=3673 GN=LOC111012422 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 3.3e-101 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of MS010871 vs. ExPASy TrEMBL
Match: A0A6J1EJR4 (B3 domain-containing transcription factor LEC2 OS=Cucurbita moschata OX=3662 GN=LOC111433235 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96 Identity = 243/469 (51.81%), Postives = 278/469 (59.28%), Query Frame = 0
BLAST of MS010871 vs. ExPASy TrEMBL
Match: A0A6J1IQY4 (B3 domain-containing transcription factor LEC2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478581 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 9.3e-96 Identity = 242/465 (52.04%), Postives = 282/465 (60.65%), Query Frame = 0
BLAST of MS010871 vs. ExPASy TrEMBL
Match: A0A6J1KW90 (B3 domain-containing transcription factor LEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111496981 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86 Identity = 224/437 (51.26%), Postives = 270/437 (61.78%), Query Frame = 0
BLAST of MS010871 vs. ExPASy TrEMBL
Match: A0A6J1EM52 (B3 domain-containing transcription factor LEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111433814 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81 Identity = 213/437 (48.74%), Postives = 262/437 (59.95%), Query Frame = 0
BLAST of MS010871 vs. TAIR 10
Match: AT1G28300.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-39 Identity = 116/252 (46.03%), Postives = 154/252 (61.11%), Query Frame = 0
BLAST of MS010871 vs. TAIR 10
Match: AT3G26790.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 123.6 bits (309), Expect = 3.7e-28 Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of MS010871 vs. TAIR 10
Match: AT3G24650.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 119.0 bits (297), Expect = 9.1e-27 Identity = 54/93 (58.06%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of MS010871 vs. TAIR 10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2 ) HSP 1 Score: 76.3 bits (186), Expect = 6.7e-14 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of MS010871 vs. TAIR 10
Match: AT4G32010.1 (HSI2-like 1 ) HSP 1 Score: 71.2 bits (173), Expect = 2.2e-12 Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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