MS010870 (gene) Bitter gourd (TR) v1

Overview


Name	MS010870
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	30S ribosomal protein S5
Location	scaffold35: 2636278 .. 2637882 (-)
RNA-Seq Expression	MS010870
Synteny	MS010870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCAACTCTCGTTCCGATTTCCTCTCTTTCATTACGCTCTTCTCCCTCCCACCGCCTCCCAATTCCGCCATTAAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCCTAGCCCCAATTTCCTCCTCCTCAATTCTCGCTCCAATTCGAGCCAAATCCTCTGACATTGACACCACCTTCTTCGACAACGTCACTCCCGAAGACGACGTCGTTTACGACCCCCCGGAAGTCCCCGAAGGCTTCGTCGCCCCTCCATCCTTCGACGAGGGTCCGCTGGAGACCGAGGAAGAAATCGCCGCCGCTTACGAGGAGATCTACGGCCCCGCTTACAGCGGAGTCTCTGTTCTGGGAAATGACATTCACGTGATGGATTCTAAGGTGAAGAAAGTGGGCGGATTCGGCTCCAAGGCCAAGAAGGACAAGCTGCGGGATGGATTCGAAGAGCGGGTCGTGCAAGTTCGGAGGGTTACGAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGAGCAATTGTTGTTGTTGGAGACAAACAGGGCCAAGTCGGCGTTGGTGTTGGTAAGGCTAAGGAGGTCATTTCCGCTGTCCAGAAATCAGCCGTCAATGCTCGCCGGAATATCGTCACCGTCCCCATGACCAAGTACCTGACCTTTCCTCACAGGTTCGTGAGTTCATTTTCTTCAATTTTGAAACTTCTATACCAATTTTTAGGCACGGCTTTTCAATTGGTTTGCTGATAATGCGAATGCGTTCAATTAAAGTTAGGAACAAGAGAATTAAGAAAGAGGAGAATTGGATCATTTGATTGCTCTAGTCCTGTATGTTTAGAGGTCTATTTGGATATTCTGATGGTCCAATCCATGGTTTAACTGTTCAATGGATTTTGGGATAGTTAATATGAGCTCTGAAGTCTATAGGCAGTTTGAACTTAACCATCATTGGGAGTTGGTTATTTGAGTTATTTGTTACTTCTGTAGCTGCATTTTGTTGATACTGAATAGTTTCTTTTGGTGTATTTCCCATTTTAGTCTAGAGTTTACTAGATTAGATTATGGAGAACTTGTTGTCCCTACCAATATTTCCAGTGTTCTTTATATGGCTGAAAGGAAGGATTGGTACATAAAAAGTACCTTGATAATGTGAGATGCATTGAAAGCTTTCCTTGAAAAGCCAAAGCTTTGGCTAATGGTCGCTAAGGAAATTATAGTTTGAAAACTCATTTTTTCCACAAGGAACCTCCAAATCATGAATGCTAGTAAAGTAATATATAGTCATAGACTCGTATTTGCGTGTCGGGTCGTTCTGTCGTGTGTGACTGTGAAACAATGGCTAAGGAGGAGGGGGAAAATTGTAGGTCGGATGGAGACTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTGCTCGAAATGGCTGGGGTTGAGAACGCTTTAGGGAAGCAACTCGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGCTGCCGTGCAGAAGATGAAACAGTTCCGGGAAGTTGCGCAGGAGCGAGGTATCCCCATGGAAGAGCTGTGGAAG

mRNA sequence

ATGGCTTCTTCAACTCTCGTTCCGATTTCCTCTCTTTCATTACGCTCTTCTCCCTCCCACCGCCTCCCAATTCCGCCATTAAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCCTAGCCCCAATTTCCTCCTCCTCAATTCTCGCTCCAATTCGAGCCAAATCCTCTGACATTGACACCACCTTCTTCGACAACGTCACTCCCGAAGACGACGTCGTTTACGACCCCCCGGAAGTCCCCGAAGGCTTCGTCGCCCCTCCATCCTTCGACGAGGGTCCGCTGGAGACCGAGGAAGAAATCGCCGCCGCTTACGAGGAGATCTACGGCCCCGCTTACAGCGGAGTCTCTGTTCTGGGAAATGACATTCACGTGATGGATTCTAAGGTGAAGAAAGTGGGCGGATTCGGCTCCAAGGCCAAGAAGGACAAGCTGCGGGATGGATTCGAAGAGCGGGTCGTGCAAGTTCGGAGGGTTACGAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGAGCAATTGTTGTTGTTGGAGACAAACAGGGCCAAGTCGGCGTTGGTGTTGGTAAGGCTAAGGAGGTCATTTCCGCTGTCCAGAAATCAGCCGTCAATGCTCGCCGGAATATCGTCACCGTCCCCATGACCAAGTACCTGACCTTTCCTCACAGGTCGGATGGAGACTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTGCTCGAAATGGCTGGGGTTGAGAACGCTTTAGGGAAGCAACTCGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGCTGCCGTGCAGAAGATGAAACAGTTCCGGGAAGTTGCGCAGGAGCGAGGTATCCCCATGGAAGAGCTGTGGAAG

Coding sequence (CDS)

ATGGCTTCTTCAACTCTCGTTCCGATTTCCTCTCTTTCATTACGCTCTTCTCCCTCCCACCGCCTCCCAATTCCGCCATTAAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCCTAGCCCCAATTTCCTCCTCCTCAATTCTCGCTCCAATTCGAGCCAAATCCTCTGACATTGACACCACCTTCTTCGACAACGTCACTCCCGAAGACGACGTCGTTTACGACCCCCCGGAAGTCCCCGAAGGCTTCGTCGCCCCTCCATCCTTCGACGAGGGTCCGCTGGAGACCGAGGAAGAAATCGCCGCCGCTTACGAGGAGATCTACGGCCCCGCTTACAGCGGAGTCTCTGTTCTGGGAAATGACATTCACGTGATGGATTCTAAGGTGAAGAAAGTGGGCGGATTCGGCTCCAAGGCCAAGAAGGACAAGCTGCGGGATGGATTCGAAGAGCGGGTCGTGCAAGTTCGGAGGGTTACGAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGAGCAATTGTTGTTGTTGGAGACAAACAGGGCCAAGTCGGCGTTGGTGTTGGTAAGGCTAAGGAGGTCATTTCCGCTGTCCAGAAATCAGCCGTCAATGCTCGCCGGAATATCGTCACCGTCCCCATGACCAAGTACCTGACCTTTCCTCACAGGTCGGATGGAGACTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTGCTCGAAATGGCTGGGGTTGAGAACGCTTTAGGGAAGCAACTCGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGCTGCCGTGCAGAAGATGAAACAGTTCCGGGAAGTTGCGCAGGAGCGAGGTATCCCCATGGAAGAGCTGTGGAAG

Protein sequence

MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELWK

Homology

[Close]

BLAST of MS010870 vs. NCBI nr
Match: XP_022142374.1 (30S ribosomal protein S5, chloroplastic [Momordica charantia])

HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
           TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN
Sbjct: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ
Sbjct: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. NCBI nr
Match: XP_038883765.1 (30S ribosomal protein S5, chloroplastic [Benincasa hispida])

HSP 1 Score: 526.6 bits (1355), Expect = 1.5e-145
Identity = 281/307 (91.53%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSS---ILAPIRAKSSD 60
           MASSTLVPISSLSLRSSPSHRLPIP  KPFTVLHSA+S+ PISSSS   IL+    KSSD
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVSVPPISSSSSSFILSATPPKSSD 60

Query: 61  IDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSV 120
           IDTTFFDNVTP++DVVYDPPEVPEGFV PPSFDEGP E+E+EIAAAYEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVTPQEDVVYDPPEVPEGFVPPPSFDEGPPESEDEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDI+VMDSKVKKVGGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKVGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 305
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of MS010870 vs. NCBI nr
Match: XP_023544602.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 522.3 bits (1344), Expect = 2.8e-144
Identity = 271/304 (89.14%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASS +VPISSLSLRSSPS+ LPIPPLKPFT+LHSA+S+ PISSSSIL+  RAK SDIDT
Sbjct: 1   MASSIIVPISSLSLRSSPSYCLPIPPLKPFTLLHSAVSVPPISSSSILSAARAKPSDIDT 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
           TFF+++ PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  TFFESINPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. NCBI nr
Match: XP_004134699.1 (30S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ribosomal protein S5, chloroplastic [Cucumis sativus] >KAE8647691.1 hypothetical protein Csa_004214 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 1.1e-143
Identity = 276/307 (89.90%), Postives = 289/307 (94.14%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + L PI   SSSSIL+  RAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFLLPISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSV 120
           IDTTFFDNV P++D+VYDPPEVPEGFV PPSFDEGP+ETEEEIAA YEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSV 120

Query: 121 LGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDI+VMDSKVKK GGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 305
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of MS010870 vs. NCBI nr
Match: XP_022978733.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 3.1e-143
Identity = 271/304 (89.14%), Postives = 292/304 (96.05%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHSA+S+ PISSS IL+  RAK SDIDT
Sbjct: 1   MASSIVVPISSLSLRSSPSYCLPIPPLKPFTVLHSAVSVPPISSSLILSAARAKPSDIDT 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
            FF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  IFFESVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. ExPASy Swiss-Prot
Match: P93014 (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.9e-109
Identity = 219/304 (72.04%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 3   SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTF 62
           +S L  +SSLSL +  S  +     K      S L+       S L  ++A S+D +T F
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTKSIVSFSSFLN----RRFSSLTLVKASSTDTETIF 63

Query: 63  FDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 122
           F++ TPE   +VV+DPP  PEGFV+PP FDEG  ETEEEIA A+EE+YGPAYSG S+LG 
Sbjct: 64  FEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESMLGK 123

Query: 123 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 182
           DI+VMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGDKQ
Sbjct: 124 DIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQ 183

Query: 183 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 242
           G VGVG  KAKEV++AVQKSA++ARRNIV VPMTKY TFPHRS+GDYGAAKVMLRPASPG
Sbjct: 184 GNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPG 243

Query: 243 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 302
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+AAVQ+M+QFR+VAQERGIPME
Sbjct: 244 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIPME 303

Query: 303 ELWK 305
           ELWK
Sbjct: 304 ELWK 303

[Close]

BLAST of MS010870 vs. ExPASy Swiss-Prot
Match: Q9ST69 (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-104
Identity = 206/310 (66.45%), Postives = 250/310 (80.65%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIR---AK 60
           MA++     S+ SL ++   R+P+ P    T+L  + S  P+    SS+   P      K
Sbjct: 1   MATTATTTPSATSL-TTLHRRIPLFPTTT-TLLSLSSSSKPLFLSLSSTRSFPTHLYCIK 60

Query: 61  SSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSG 120
             DID TFF+   P++++ +DPPE PEG++ P + DE P E+EEEIA AYEE+YG AYSG
Sbjct: 61  KDDIDITFFEQDNPDEEITFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSG 120

Query: 121 VSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIV 180
            S+LGND++ MDSK+KK  GFGSK+KK+K+RDGFEE VVQVRRVTKVVKGGK + FRAIV
Sbjct: 121 ESLLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIV 180

Query: 181 VVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVML 240
           VVGDK+GQVGVGVGKAKEV+SAVQK+AV+ARRNI+TVPMTKYLTFPHR++ DYGAA+VML
Sbjct: 181 VVGDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVML 240

Query: 241 RPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQE 300
           RPA+PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+ AVQ M+QF +VA++
Sbjct: 241 RPAAPGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARD 300

Query: 301 RGIPMEELWK 305
           RGIPMEELWK
Sbjct: 301 RGIPMEELWK 308

[Close]

BLAST of MS010870 vs. ExPASy Swiss-Prot
Match: Q1XDJ0 (30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-48
Identity = 100/167 (59.88%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 138 KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA 197
           K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+V+G++QGQVGVGVGKA +VI A
Sbjct: 6   KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGA 65

Query: 198 VQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 257
           V+K   +A++++VTVP+TK  + PH  +G  GAAKV+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 258 GVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW 304
           GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLY 172

[Close]

BLAST of MS010870 vs. ExPASy Swiss-Prot
Match: P51298 (30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 100/167 (59.88%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 138 KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISA 197
           K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+VVG++QGQVGVGVGKA +VI A
Sbjct: 6   KQGKSKEKDNGWEERVVQVKRVTKVVKGGKKLSFRVILVVGNEQGQVGVGVGKASDVIGA 65

Query: 198 VQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 257
           V+K   +A++++VTVP+TK  + PH  +G  GAA+V+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAQVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 258 GVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW 304
           GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIENLY 172

[Close]

BLAST of MS010870 vs. ExPASy Swiss-Prot
Match: B2ITN9 (30S ribosomal protein S5 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsE PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-47
Identity = 98/166 (59.04%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 138 KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV 197
           +AKK++    ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGVGKA +VI AV
Sbjct: 11  RAKKEETT--WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAV 70

Query: 198 QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 257
           +K   + +++++ +P+TK  + PH  DG  G AKV++RPA+PGTGVIAGGAVR VLE+AG
Sbjct: 71  KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVIMRPAAPGTGVIAGGAVRTVLELAG 130

Query: 258 VENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW 304
           V N L KQLGSNN LNNARA V A+  ++   EVA++RGIP++ L+
Sbjct: 131 VRNVLAKQLGSNNPLNNARAAVNALSTLRTLSEVAEDRGIPIQNLY 174

[Close]

BLAST of MS010870 vs. ExPASy TrEMBL
Match: A0A6J1CLD7 (30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012511 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.6e-159
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
           TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN
Sbjct: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ
Sbjct: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. ExPASy TrEMBL
Match: A0A0A0KK69 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.1e-144
Identity = 276/307 (89.90%), Postives = 289/307 (94.14%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + L PI   SSSSIL+  RAKSSD
Sbjct: 47  MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFLLPISSSSSSSILSATRAKSSD 106

Query: 61  IDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSV 120
           IDTTFFDNV P++D+VYDPPEVPEGFV PPSFDEGP+ETEEEIAA YEEIYGPAYSGVSV
Sbjct: 107 IDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSV 166

Query: 121 LGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDI+VMDSKVKK GGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 167 LGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 226

Query: 181 DKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPA
Sbjct: 227 DKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 286

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Sbjct: 287 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 346

Query: 301 PMEELWK 305
           PMEELWK
Sbjct: 347 PMEELWK 353

[Close]

BLAST of MS010870 vs. ExPASy TrEMBL
Match: A0A6J1IU44 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478601 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 271/304 (89.14%), Postives = 292/304 (96.05%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHSA+S+ PISSS IL+  RAK SDIDT
Sbjct: 1   MASSIVVPISSLSLRSSPSYCLPIPPLKPFTVLHSAVSVPPISSSLILSAARAKPSDIDT 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
            FF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  IFFESVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. ExPASy TrEMBL
Match: A0A6J1EDM2 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433236 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 269/304 (88.49%), Postives = 293/304 (96.38%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60
           MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHS++S+ PISSS IL+  RAK SD++T
Sbjct: 1   MASSIIVPISSLSLRSSPSYCLPIPPLKPFTVLHSSVSVPPISSSLILSVARAKPSDVET 60

Query: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120
           TFF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  TFFESVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180
           DI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 305
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of MS010870 vs. ExPASy TrEMBL
Match: A0A5D3CMJ7 (30S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007540 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 273/307 (88.93%), Postives = 289/307 (94.14%), Query Frame = 0


Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLH---SALSLAPISSSSILAPIRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LH   S LS++  SSSSIL+  RAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSV 120
           IDTTFFDNV P++D+ +DPPEVPEGFV PPSFDEGP+ETEEEIAAAYEEIYGPAYSGVSV
Sbjct: 61  IDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDI+VMDSKVKK GGFGSKAKK+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 305
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]

BLAST of MS010870 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 2.8e-110
Identity = 219/304 (72.04%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 3   SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTF 62
           +S L  +SSLSL +  S  +     K      S L+       S L  ++A S+D +T F
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTKSIVSFSSFLN----RRFSSLTLVKASSTDTETIF 63

Query: 63  FDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 122
           F++ TPE   +VV+DPP  PEGFV+PP FDEG  ETEEEIA A+EE+YGPAYSG S+LG 
Sbjct: 64  FEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESMLGK 123

Query: 123 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 182
           DI+VMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGDKQ
Sbjct: 124 DIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQ 183

Query: 183 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 242
           G VGVG  KAKEV++AVQKSA++ARRNIV VPMTKY TFPHRS+GDYGAAKVMLRPASPG
Sbjct: 184 GNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPG 243

Query: 243 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 302
           TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+AAVQ+M+QFR+VAQERGIPME
Sbjct: 244 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIPME 303

Query: 303 ELWK 305
           ELWK
Sbjct: 304 ELWK 303

[Close]

BLAST of MS010870 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 49/159 (30.82%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 138 KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV 197
           K ++   R G++  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   SA+
Sbjct: 348 KKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAM 407

Query: 198 QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 257
           QK+     +N+  V   +  T  H     Y   K+ L PA   TG+ AG  V+ +L +AG
Sbjct: 408 QKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAG 467

Query: 258 VENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERG 297
            +N   K +GS N+ N  +A + A+  ++  ++V ++ G
Sbjct: 468 FKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFG 506

[Close]

BLAST of MS010870 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 149 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNI 208
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 209 VTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 268
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 269 LGKQLGSNNALNN-ARATVAAVQKMKQF 289
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of MS010870 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 149 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNI 208
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 209 VTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 268
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 269 LGKQLGSNNALNN-ARATVAAVQKMKQF 289
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of MS010870 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 149 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNI 208
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 209 VTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 268
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 269 LGKQLGSNNALNN-ARATVAAVQKMKQF 289
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

The following BLAST results are available for this feature:

BLAST of MS010870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142374.1	1.2e-158	99.67	30S ribosomal protein S5, chloroplastic [Momordica charantia]	[more]
XP_038883765.1	1.5e-145	91.53	30S ribosomal protein S5, chloroplastic [Benincasa hispida]	[more]
XP_023544602.1	2.8e-144	89.14	30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134699.1	1.1e-143	89.90	30S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ri...	[more]
XP_022978733.1	3.1e-143	89.14	30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of MS010870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93014	3.9e-109	72.04	30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 ...	[more]
Q9ST69	2.9e-104	66.45	30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=...	[more]
Q1XDJ0	5.0e-48	59.88	30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=...	[more]
P51298	1.1e-47	59.88	30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=...	[more]
B2ITN9	5.6e-47	59.04	30S ribosomal protein S5 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O...	[more]

BLAST of MS010870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLD7	5.6e-159	99.67	30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KK69	5.1e-144	89.90	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=...	[more]
A0A6J1IU44	1.5e-143	89.14	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EDM2	2.5e-143	88.49	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5D3CMJ7	1.6e-142	88.93	30S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of MS010870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33800.1	2.8e-110	72.04	Ribosomal protein S5 family protein	[more]
AT1G64880.1	1.3e-14	30.82	Ribosomal protein S5 family protein	[more]
AT1G58983.1	2.7e-12	31.76	Ribosomal protein S5 family protein	[more]
AT1G59359.1	2.7e-12	31.76	Ribosomal protein S5 family protein	[more]
AT1G58380.1	2.7e-12	31.76	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 215..303 e-value: 8.2E-28 score: 97.8
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 148..212 e-value: 1.5E-23 score: 82.6
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 148..211 score: 25.113243
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 225..295 e-value: 6.4E-26 score: 89.6
None	No IPR available	GENE3D	3.30.160.20		coord: 138..209 e-value: 4.4E-23 score: 82.8
None	No IPR available	PANTHER	PTHR13718:SF94	30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC	coord: 7..304
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 143..213
IPR005712	Ribosomal protein S5, bacterial-type	TIGRFAM	TIGR01021	TIGR01021	coord: 147..301 e-value: 8.5E-60 score: 199.1
IPR005712	Ribosomal protein S5, bacterial-type	HAMAP	MF_01307_B	Ribosomal_S5_B	coord: 125..301 score: 32.538933
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 7..304
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 165..197
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 218..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010870.1	MS010870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome