![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS010866 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCGTCGTCGTCGTCGTCGACTTTCCCTGTCATCTGCCTTCTTCACTCTGTGGTTGCCATCACGAGCGGGACCCTCATGATGTTCTATATGAAGGAGATTTACACGATTGGCCATGGGATCGACACCGCCACTAAGTTAATGGGGTCTACGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTCTCCGGGTTGCTCCTATTCGCAATCGGGTTTCTCCTGTTCATGGTTTCGTTCGTGAAGGACAAGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACAGTGCTTCACGTCTCAATGGCGATGTGGAGATTCTACTTCGAGCGACGAGTGGAGGACATGGCCTGGGATTGGCTGAGGCAGATTGTTGGTGACATTCTTCTCGCCCTCTCTTGGGTCTTCTTTCTTTTTTATTCCTGGAGAGAAAAGTATGAT TCGTCGTCGTCGTCGTCGACTTTCCCTGTCATCTGCCTTCTTCACTCTGTGGTTGCCATCACGAGCGGGACCCTCATGATGTTCTATATGAAGGAGATTTACACGATTGGCCATGGGATCGACACCGCCACTAAGTTAATGGGGTCTACGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTCTCCGGGTTGCTCCTATTCGCAATCGGGTTTCTCCTGTTCATGGTTTCGTTCGTGAAGGACAAGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACAGTGCTTCACGTCTCAATGGCGATGTGGAGATTCTACTTCGAGCGACGAGTGGAGGACATGGCCTGGGATTGGCTGAGGCAGATTGTTGGTGACATTCTTCTCGCCCTCTCTTGGGTCTTCTTTCTTTTTTATTCCTGGAGAGAAAAGTATGAT TCGTCGTCGTCGTCGTCGACTTTCCCTGTCATCTGCCTTCTTCACTCTGTGGTTGCCATCACGAGCGGGACCCTCATGATGTTCTATATGAAGGAGATTTACACGATTGGCCATGGGATCGACACCGCCACTAAGTTAATGGGGTCTACGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTCTCCGGGTTGCTCCTATTCGCAATCGGGTTTCTCCTGTTCATGGTTTCGTTCGTGAAGGACAAGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACAGTGCTTCACGTCTCAATGGCGATGTGGAGATTCTACTTCGAGCGACGAGTGGAGGACATGGCCTGGGATTGGCTGAGGCAGATTGTTGGTGACATTCTTCTCGCCCTCTCTTGGGTCTTCTTTCTTTTTTATTCCTGGAGAGAAAAGTATGAT SSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMAMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD Homology
BLAST of MS010866 vs. NCBI nr
Match: XP_022142070.1 (uncharacterized protein LOC111012289 [Momordica charantia]) HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MS010866 vs. NCBI nr
Match: XP_038881843.1 (uncharacterized protein LOC120073208 [Benincasa hispida]) HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MS010866 vs. NCBI nr
Match: XP_022926441.1 (uncharacterized protein LOC111433593 [Cucurbita moschata] >XP_023517142.1 uncharacterized protein LOC111780988 [Cucurbita pepo subsp. pepo] >KAG6594602.1 hypothetical protein SDJN03_11155, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026572.1 hypothetical protein SDJN02_10574, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.9 bits (725), Expect = 7.9e-73 Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of MS010866 vs. NCBI nr
Match: XP_008439852.1 (PREDICTED: uncharacterized protein LOC103484518 [Cucumis melo] >KAA0052685.1 uncharacterized protein E6C27_scaffold120G002970 [Cucumis melo var. makuwa] >TYK13139.1 uncharacterized protein E5676_scaffold255G007490 [Cucumis melo var. makuwa]) HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MS010866 vs. NCBI nr
Match: XP_011658212.1 (uncharacterized protein LOC101204514 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MS010866 vs. ExPASy TrEMBL
Match: A0A6J1CJW0 (uncharacterized protein LOC111012289 OS=Momordica charantia OX=3673 GN=LOC111012289 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 4.9e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MS010866 vs. ExPASy TrEMBL
Match: A0A6J1EEX8 (uncharacterized protein LOC111433593 OS=Cucurbita moschata OX=3662 GN=LOC111433593 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 3.8e-73 Identity = 139/145 (95.86%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of MS010866 vs. ExPASy TrEMBL
Match: A0A5D3CSC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007490 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MS010866 vs. ExPASy TrEMBL
Match: A0A1S3AZP8 (uncharacterized protein LOC103484518 OS=Cucumis melo OX=3656 GN=LOC103484518 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MS010866 vs. ExPASy TrEMBL
Match: A0A0A0KHM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517380 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72 Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MS010866 vs. TAIR 10
Match: AT1G53035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 194.5 bits (493), Expect = 5.9e-50 Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of MS010866 vs. TAIR 10
Match: AT3G15358.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53035.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47 Identity = 89/143 (62.24%), Postives = 113/143 (79.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|