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MS010858 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACAATCGCTACAGAGACACAAGGATTTGAAGGAAGCTTCGTATTATATGATGATACCGCAGCAATGGGCGTCTCCTTGTGGAAACCAATGCACGCACAAATACGCAGCACTCACCCAGATTCCTTGTAATTCCTTCTCTCTATCATCCATTTTTACAGCATTTTTCTCTCTTCCGCATTCCTAGAATCTATATCTTTTACGCATTTCTTCGATTACTTCATTAGACACGTCTAAAAAGTGGGTGCGGTTCGTAAGTTTAAGAACCCACCCTTCTTTAATGTTAAGCTAGAAACTCACGTCGCGTAAATCCGTTCTATTTTCCGTCGGATGCTGAACGCTATGGTCGAATACCGGACTCCTTGCGTCTGATTGGGTTATTACTTATTCTTATTACGCATGATTTTGCTAGGAAGCTGTATTTTGGATGAAACAGTTGATGGAAATGCCCGCATTTGTAATAGATTAAGGGAGAATATACTTTTAACCCTATGTTCCGTTTTAAAATTTGAGTTTTCGTGAATTGTATTTGTGATATGGATTTGGGGGTCCAATGTTGAGGATATCAATTTATTCGACTTAGGCAGTTGATAGTGCGAACGGAGATGGTTAGTTTCGTGTGGGATCCTTGAATATGGTGCTAGTTGACGTGGTTTTAATTTTGTTAATGTTTGAATTTGGGTAGTTTAATAATACTTTGTTCTGCATAATCTCAATGGTTTCAATGTAGGGCGGGTATTCTGCAAAAAGGGGTGTGATGCCGATGGGGAGGACTGGGAGGAATGTAAGTAGTTCTTCTTCTCATCTTTCATTTTTTCATTTCACAATATTTTTCTTCCAGATGTATTTTTCCTGCTTTTCTTGTGGTCTTGTGTGATTTAATTTTTAGTGTACATGTCATTTATCATTTTTGAGTGCTCAGTTGATTAGTTTATTGAGGTTCATTGAGATCTTGGGGCACACGGTTTAGTTGTGTTGAATGCTACAACTTGCTATAGTTATTTTCAGCAACATTCATTGTAGGCAGAAAATTACTGGTCCAGCAGAAATTTTTTCTGCTTCCTCTTTGATTTTCCCAATGAATTGAGGCAATGTACAGTAGTGCTGAATGTCCCTCCAAACCCTTAATTTGAGTAAGATTGGTTAGCACTGCTTTCTTCCAAATGCTAGATTGCGGGTTCTAGAGAGCTCTCTTGTCAAAATCCTGACCAACACTGTTAGTTGGGGGAGAGTATCCATAAAAATGCTAATAGCATGTTAATATAGCTTGTGATAATTGAAAACATTCATATGGTTTTTCTCTTTTCATGGTTTTTTCTGTACTTATATGATATCTGATCATTTAGTTTAATCTTTACCGTTATAGATAAATTGTAGCTTTTAACAGTTATTAATGTGTTATTCGTGATAAGTAAAGGCTAATAGAACAATCTTGTTTGATGGTTTATAATTGTAAGACGATGGAATTCTAACAATCAAATGTTTAATATTGTTCATAAATATTAATCGTTGCTGTTGTTGAATCTCAAGGCTTGGAAGAATGCACTGAGATATGCTACAAGGATCCTGTACTTAAGGATCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGAGCTGCCAGTTACTCAGAGGTACTTTATCGTCGTGGTATTATTTTAAAGAATTTATTTGATTCTGATGGTTTTCGTCGTTGATAGTTTGAACGAATAATATCTCAGCAACCCACCTCTCTAGTAATCACCATTCACCAAACATTCTCTCTACTCTGACAGGATATGTGAACTATGAACATTTTAAGTTAATTCATATGTAGTATCTTTTGTTACAACCCATTTGTTAATTATACTTACTTTTGGATTTTGACTCTTTGCTGCTAACAGGAATGTTTTCACGCCTGTGTATCTGGTTGTGGCTTTAAGGTGAGTTTGATCCTATTAGGAATAAGCTTCTGGTCACTTTTACTTGCATTTATGAATAGTAACCGTGTGAAGTAGTAGTTGGAAGACTCATTTCATATGTTAAGTAAATGTCCAAACTGTAGATTAAGTCCTTAGTTCAAGTTCAATAATTCTTTGACTTTAATAGTCCCCCATCTCCTTTTTCAAAAAATGAGTTTTAAGCTGCTTTAGAAAACGAAAATGCTTTGTCACGATTTAAAACCTTGAACCGAATCATGGACGTGATACTCCCTGCACTCATTTTTTTCAATATACATACAATGTTAGTGCCTGCACCCTGCAGCATGGTTTTGCTACTCATACTCGTATTCGGCCTAAACATGTAGTGGGACGTTGACATTGTTGATAAATGCTGAATGCTTGAAAGCCATGCAATCCTCCCCTGTACCTTCTTTTAAACAGTTAAAATTAAGCATTACCTAGAGCTATATTTTATACGAAGGGTGTAGTCTGATATTCTAAGATGCTGGTGTTATTGAGTGATTATCATGCATTAACTTTTCTACTAATGTCTTGCCATTCTGATAGCCTTAAGAAAAGTAATAGAAACTTTCATGTTTAGTAATTAACAATTCTAACGTTCTCGTATTCTGATGATGTTTCACTTTCTGTGATTAGTTTGAAGTCGATTCGGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGTGAAACCAGCGCCTGTGGTTCCAACGCCATCCCCTCGACCTCCAATCACTGAATCTAATACCAAAAATGAAGATTTACCAAGCACTTCTGCA AAACAATCGCTACAGAGACACAAGGATTTGAAGGAAGCTTCGTATTATATGATGATACCGCAGCAATGGGCGTCTCCTTGTGGAAACCAATGCACGCACAAATACGCAGCACTCACCCAGATTCCTTGGCGGGTATTCTGCAAAAAGGGGTGTGATGCCGATGGGGAGGACTGGGAGGAATGCTTGGAAGAATGCACTGAGATATGCTACAAGGATCCTGTACTTAAGGATCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGAGCTGCCAGTTACTCAGAGGAATGTTTTCACGCCTGTGTATCTGGTTGTGGCTTTAAGTTTGAAGTCGATTCGGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGTGAAACCAGCGCCTGTGGTTCCAACGCCATCCCCTCGACCTCCAATCACTGAATCTAATACCAAAAATGAAGATTTACCAAGCACTTCTGCA AAACAATCGCTACAGAGACACAAGGATTTGAAGGAAGCTTCGTATTATATGATGATACCGCAGCAATGGGCGTCTCCTTGTGGAAACCAATGCACGCACAAATACGCAGCACTCACCCAGATTCCTTGGCGGGTATTCTGCAAAAAGGGGTGTGATGCCGATGGGGAGGACTGGGAGGAATGCTTGGAAGAATGCACTGAGATATGCTACAAGGATCCTGTACTTAAGGATCACCAGTGGAGTGCTTACATTGACCGATCTCCTGGAGCTGCCAGTTACTCAGAGGAATGTTTTCACGCCTGTGTATCTGGTTGTGGCTTTAAGTTTGAAGTCGATTCGGAGAAAGCTGACAAAATCCAACCAAACAGGCCTGTGAAACCAGCGCCTGTGGTTCCAACGCCATCCCCTCGACCTCCAATCACTGAATCTAATACCAAAAATGAAGATTTACCAAGCACTTCTGCA KQSLQRHKDLKEASYYMMIPQQWASPCGNQCTHKYAALTQIPWRVFCKKGCDADGEDWEECLEECTEICYKDPVLKDHQWSAYIDRSPGAASYSEECFHACVSGCGFKFEVDSEKADKIQPNRPVKPAPVVPTPSPRPPITESNTKNEDLPSTSA Homology
BLAST of MS010858 vs. NCBI nr
Match: XP_022142369.1 (uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142370.1 uncharacterized protein LOC111012509 [Momordica charantia] >XP_022142371.1 uncharacterized protein LOC111012509 [Momordica charantia]) HSP 1 Score: 303.9 bits (777), Expect = 7.9e-79 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of MS010858 vs. NCBI nr
Match: XP_008439869.1 (PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo] >XP_008439871.1 PREDICTED: uncharacterized protein LOC103484528 isoform X1 [Cucumis melo]) HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75 Identity = 136/155 (87.74%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of MS010858 vs. NCBI nr
Match: XP_004134712.1 (uncharacterized protein LOC101206260 [Cucumis sativus] >KAE8647688.1 hypothetical protein Csa_003744 [Cucumis sativus]) HSP 1 Score: 278.1 bits (710), Expect = 4.6e-71 Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 0
BLAST of MS010858 vs. NCBI nr
Match: XP_038883449.1 (uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida] >XP_038883450.1 uncharacterized protein LOC120074406 isoform X1 [Benincasa hispida]) HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70 Identity = 125/139 (89.93%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of MS010858 vs. NCBI nr
Match: XP_022926758.1 (uncharacterized protein LOC111433786 [Cucurbita moschata] >XP_023003188.1 uncharacterized protein LOC111496877 [Cucurbita maxima] >XP_023518775.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo] >XP_023518776.1 uncharacterized protein LOC111782187 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66 Identity = 118/138 (85.51%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of MS010858 vs. ExPASy TrEMBL
Match: A0A6J1CKR8 (uncharacterized protein LOC111012509 OS=Momordica charantia OX=3673 GN=LOC111012509 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 3.8e-79 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of MS010858 vs. ExPASy TrEMBL
Match: A0A1S3AZC9 (uncharacterized protein LOC103484528 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484528 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75 Identity = 136/155 (87.74%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of MS010858 vs. ExPASy TrEMBL
Match: A0A6J1KVS0 (uncharacterized protein LOC111496877 OS=Cucurbita maxima OX=3661 GN=LOC111496877 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.7e-67 Identity = 118/138 (85.51%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of MS010858 vs. ExPASy TrEMBL
Match: A0A6J1EJ45 (uncharacterized protein LOC111433786 OS=Cucurbita moschata OX=3662 GN=LOC111433786 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.7e-67 Identity = 118/138 (85.51%), Postives = 125/138 (90.58%), Query Frame = 0
BLAST of MS010858 vs. ExPASy TrEMBL
Match: A0A6P5WIY0 (uncharacterized protein LOC111275059 OS=Durio zibethinus OX=66656 GN=LOC111275059 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58 Identity = 104/138 (75.36%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of MS010858 vs. TAIR 10
Match: AT4G21720.1 (unknown protein; Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi - 93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288 (source: NCBI BLink). ) HSP 1 Score: 195.7 bits (496), Expect = 2.8e-50 Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 0
BLAST of MS010858 vs. TAIR 10
Match: AT4G21720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sepal, male gametophyte, root, flower; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage. ) HSP 1 Score: 111.7 bits (278), Expect = 5.3e-25 Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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