Homology
BLAST of MS010857 vs. NCBI nr
Match:
XP_022142125.1 (RNA polymerase II transcription factor B subunit 2 [Momordica charantia])
HSP 1 Score: 831.2 bits (2146), Expect = 4.2e-237
Identity = 440/496 (88.71%), Postives = 443/496 (89.31%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL
Sbjct: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
Query: 241 ----------------------------------------AYDIDTLTEEQRYAIKDLAD 300
AYDIDTLTEEQRYAIKDLAD
Sbjct: 241 LQWLFGDADLLLRFVCLFRGALFFIVLSGFLYFWEFISFLAYDIDTLTEEQRYAIKDLAD 300
Query: 301 LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL 360
LGLVKLQQ + F+ PT ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL
Sbjct: 301 LGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL 360
Query: 361 HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSV 420
HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSV
Sbjct: 361 HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV 420
Query: 421 PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV 456
PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV
Sbjct: 421 PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV 480
BLAST of MS010857 vs. NCBI nr
Match:
XP_004134713.1 (general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus] >KGN49219.1 hypothetical protein Csa_003950 [Cucumis sativus])
HSP 1 Score: 829.7 bits (2142), Expect = 1.2e-236
Identity = 425/456 (93.20%), Postives = 439/456 (96.27%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTL++EQRYAIKDLADLGLVKLQQ ++ I PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQG---RKESWFI--PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
GFVVVETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 LGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. NCBI nr
Match:
XP_022977542.1 (RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima])
HSP 1 Score: 827.0 bits (2135), Expect = 7.9e-236
Identity = 423/456 (92.76%), Postives = 438/456 (96.05%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTLTEEQRYAIKDLADLGLVKLQQ + F+ PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. NCBI nr
Match:
XP_038882460.1 (general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida])
HSP 1 Score: 826.6 bits (2134), Expect = 1.0e-235
Identity = 424/456 (92.98%), Postives = 438/456 (96.05%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLP MKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+A
Sbjct: 1 MPQVKIIAKNFMDMVASLPPMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTYRLNP FQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPANITVRLPSLEELKAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTLT+EQRYAIKDLADLGLVKLQQ + F+ PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLTDEQRYAIKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWED KNMRLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDLKNMRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. NCBI nr
Match:
XP_023543805.1 (RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 824.3 bits (2128), Expect = 5.1e-235
Identity = 422/456 (92.54%), Postives = 437/456 (95.83%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTLTEEQRYAIKDLADLGLVKLQQ + F+ PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. ExPASy Swiss-Prot
Match:
Q680U9 (General transcription and DNA repair factor IIH subunit TFB2 OS=Arabidopsis thaliana OX=3702 GN=TFB2 PE=2 SV=1)
HSP 1 Score: 683.3 bits (1762), Expect = 1.8e-195
Identity = 344/455 (75.60%), Postives = 396/455 (87.03%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AY+++TLTE Q +KDLADLGLVKLQQ + F+ PT ATNLS+SLADSS+RK
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSVSLADSSARK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
+GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI AITKESLYNAF NGIT++Q
Sbjct: 301 EGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD
Sbjct: 361 IITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ 455
+AREW GLLWEDSK MRLVVK++VH MRE L Q
Sbjct: 421 FAREWRGLLWEDSKRMRLVVKSEVHNQMREFLHTQ 450
BLAST of MS010857 vs. ExPASy Swiss-Prot
Match:
Q92759 (General transcription factor IIH subunit 4 OS=Homo sapiens OX=9606 GN=GTF2H4 PE=1 SV=1)
HSP 1 Score: 239.6 bits (610), Expect = 7.0e-62
Identity = 148/457 (32.39%), Postives = 247/457 (54.05%), Query Frame = 0
Query: 3 QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKS 62
+V + +N + + L LD LY + C A+ R LP LAK +V++ML++E P+ +
Sbjct: 11 RVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAA 70
Query: 63 MEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIYGEVLA 122
+ WV + + + L LR++ LNP F+ NL+ LL G+ +
Sbjct: 71 VALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWS 130
Query: 123 REPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-S 182
+ + L+ YA ++WE L ++ S A +++ + Q GL+ S
Sbjct: 131 DDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKS 190
Query: 183 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 242
E P +T +GFQFLL++T AQLWY + +Y+ ++ RG+D +++SFL +LSF G+
Sbjct: 191 TEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGK 250
Query: 243 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR 302
Y ++ +++ ++ L + GL VF + A NLS +S A +
Sbjct: 251 DYSVEGMSDSLLNFLQHLREFGL-----VFQRKRKSRRYYPTRLAINLSSGVSGAGGTVH 310
Query: 303 KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAE 362
+ GF+VVETN+R+YAY+ S L ++ LFS + Y+ PN++V +T+ES+ A +GITA+
Sbjct: 311 QPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQ 370
Query: 363 QAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAAC 422
Q I FL+ AHP + ++ P +P +TDQIRLWE + +R+ T Y++F S+ FE
Sbjct: 371 QIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLL 430
Query: 423 DYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
+ARE L++E+S +VV H+ ++ +RQK
Sbjct: 431 AHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQK 459
BLAST of MS010857 vs. ExPASy Swiss-Prot
Match:
P60027 (General transcription factor IIH subunit 4 OS=Pan troglodytes OX=9598 GN=GTF2H4 PE=3 SV=1)
HSP 1 Score: 239.6 bits (610), Expect = 7.0e-62
Identity = 148/457 (32.39%), Postives = 247/457 (54.05%), Query Frame = 0
Query: 3 QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKS 62
+V + +N + + L LD LY + C A+ R LP LAK +V++ML++E P+ +
Sbjct: 11 RVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAA 70
Query: 63 MEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIYGEVLA 122
+ WV + + + L LR++ LNP F+ NL+ LL G+ +
Sbjct: 71 VALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWS 130
Query: 123 REPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-S 182
+ + L+ YA ++WE L ++ S A +++ + Q GL+ S
Sbjct: 131 DDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKS 190
Query: 183 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 242
E P +T +GFQFLL++T AQLWY + +Y+ ++ RG+D +++SFL +LSF G+
Sbjct: 191 TEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGK 250
Query: 243 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR 302
Y ++ +++ ++ L + GL VF + A NLS +S A +
Sbjct: 251 DYSVEGMSDSLLNFLQHLREFGL-----VFQRKRKSRRYYPTRLAINLSSGVSGAGGTVH 310
Query: 303 KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAE 362
+ GF+VVETN+R+YAY+ S L ++ LFS + Y+ PN++V +T+ES+ A +GITA+
Sbjct: 311 QPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQ 370
Query: 363 QAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAAC 422
Q I FL+ AHP + ++ P +P +TDQIRLWE + +R+ T Y++F S+ FE
Sbjct: 371 QIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLL 430
Query: 423 DYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
+ARE L++E+S +VV H+ ++ +RQK
Sbjct: 431 AHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQK 459
BLAST of MS010857 vs. ExPASy Swiss-Prot
Match:
O70422 (General transcription factor IIH subunit 4 OS=Mus musculus OX=10090 GN=Gtf2h4 PE=1 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 1.6e-61
Identity = 147/451 (32.59%), Postives = 244/451 (54.10%), Query Frame = 0
Query: 9 KNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVL 68
+N + + L LD LY + C A+ R LP LAK +V++ML++E P+ ++ WV
Sbjct: 18 RNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVK 77
Query: 69 SDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIYGEVLAREPMPS 128
+ + + L LR++ LNP F+ NL+ LL G+ + +
Sbjct: 78 KEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLRIALLGGGKAWSDDTSQL 137
Query: 129 NITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEA 188
+ L+ YA ++WE L ++ S A +++ + Q GL+ S E
Sbjct: 138 GPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKSTEPGEP 197
Query: 189 PRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDT 248
P +T +GFQFLL++T AQLWY + +Y+ ++ RG+D +++SFL +LSF G+ Y ++
Sbjct: 198 PCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEG 257
Query: 249 LTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSRKQGFVV 308
+++ ++ L + GL VF + A NLS +S A + + GF+V
Sbjct: 258 MSDSLLNFLQHLREFGL-----VFQRKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGFIV 317
Query: 309 VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFL 368
VETN+R+YAY+ S L ++ LFS + Y+ PN++V +T+ES+ A +GITA+Q I FL
Sbjct: 318 VETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFL 377
Query: 369 QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREW 428
+ AHP + ++ P +P +TDQIRLWE + +R+ T Y++F S+ FE +ARE
Sbjct: 378 RTRAHPVMLKQNPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHAREL 437
Query: 429 NGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
L++E+S +VV H+ ++ +RQK
Sbjct: 438 GVLVFENSAKRLMVVTPAGHSDVKRFWKRQK 460
BLAST of MS010857 vs. ExPASy Swiss-Prot
Match:
Q54C29 (General transcription factor IIH subunit 4 OS=Dictyostelium discoideum OX=44689 GN=gtf2h4 PE=3 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 1.0e-60
Identity = 147/477 (30.82%), Postives = 255/477 (53.46%), Query Frame = 0
Query: 15 VASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSK 74
+ASL + L+ LY++ + C+AILRSLPP +K+++L+ML ++ ++W + +
Sbjct: 10 LASLDSKDLEELYKDPWTCQAILRSLPPRSKQYILKMLLVDT-YPLSLAKDWSTQASIQQ 69
Query: 75 YKVALDRLIQLRVFI---------------------------ETADRKRETTYRLNPTFQ 134
+K +L +L L++ + ++ E T RLNP FQ
Sbjct: 70 HKESLKKLFDLKIIFLDKINKPIQPQQQQSSQQSSSQQQQQQQQQQQQTEQTIRLNPLFQ 129
Query: 135 ANLQKLLI-YGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI 194
N+++ L+ +V+ + PS++DL++Y+ QWE L L S +PS +
Sbjct: 130 DNIKRSLVQVNQVIFSNNSSIKDNHKPPSIDDLDSYSKSQWEKVLYFL--SDDTVQPSKL 189
Query: 195 SSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVD 254
S ++ L++++ + +T GF+FLL + Q+W ++ Y+ + E++
Sbjct: 190 ISELL---LSSNLTKQEGDGLSITSEGFKFLLKDVYTQIWTLLIVYLDDLEKKKGKGSGS 249
Query: 255 PADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQ-QVFLLTSATFLIDM 314
DL+SFL LSF G Y + L+E+Q+ + L GL+ ++ +L T LI
Sbjct: 250 RNDLLSFLFRLSFLNLGRGYLVSELSEQQKEYLFALKQFGLIYMRTDSSILFYPTRLIIS 309
Query: 315 PTFATNLSMSLADSSSR-----KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPN 374
T LS+ + SS R +QG++V+ETN+R+YAY+SS L +L LF ++ Y+LPN
Sbjct: 310 LTTGKTLSLIQSISSERTQTQKEQGYIVLETNYRLYAYTSSSLQISLLSLFVKMLYRLPN 369
Query: 375 LIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNR 434
L VG IT+ES+ A +GITA+Q I F++ N+HP A +P+ V +QI LWE++ NR
Sbjct: 370 LAVGIITRESIRTALIHGITADQIIDFVRHNSHPNAANSGQPIPDVVAEQILLWEAERNR 429
Query: 435 VDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRR 454
+ T + Y+ FP+ + + A +A+E + +W LVVK + + +R +++
Sbjct: 430 ITYTKSVLYNSFPTNDCYIATLKFAKEQDYYIWSHDPLKTLVVKEEGNDPIRNFIKK 480
BLAST of MS010857 vs. ExPASy TrEMBL
Match:
A0A6J1CK16 (RNA polymerase II transcription factor B subunit 2 OS=Momordica charantia OX=3673 GN=LOC111012326 PE=3 SV=1)
HSP 1 Score: 831.2 bits (2146), Expect = 2.0e-237
Identity = 440/496 (88.71%), Postives = 443/496 (89.31%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL
Sbjct: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
Query: 241 ----------------------------------------AYDIDTLTEEQRYAIKDLAD 300
AYDIDTLTEEQRYAIKDLAD
Sbjct: 241 LQWLFGDADLLLRFVCLFRGALFFIVLSGFLYFWEFISFLAYDIDTLTEEQRYAIKDLAD 300
Query: 301 LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL 360
LGLVKLQQ + F+ PT ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL
Sbjct: 301 LGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRL 360
Query: 361 HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSV 420
HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSV
Sbjct: 361 HCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV 420
Query: 421 PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV 456
PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV
Sbjct: 421 PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVV 480
BLAST of MS010857 vs. ExPASy TrEMBL
Match:
A0A0A0KK55 (RNA polymerase II transcription factor B subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_6G517270 PE=3 SV=1)
HSP 1 Score: 829.7 bits (2142), Expect = 5.9e-237
Identity = 425/456 (93.20%), Postives = 439/456 (96.27%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTL++EQRYAIKDLADLGLVKLQQ ++ I PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQG---RKESWFI--PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
GFVVVETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 LGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. ExPASy TrEMBL
Match:
A0A6J1IIT5 (RNA polymerase II transcription factor B subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111477843 PE=3 SV=1)
HSP 1 Score: 827.0 bits (2135), Expect = 3.8e-236
Identity = 423/456 (92.76%), Postives = 438/456 (96.05%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTLTEEQRYAIKDLADLGLVKLQQ + F+ PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. ExPASy TrEMBL
Match:
A0A6J1EGA7 (RNA polymerase II transcription factor B subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111433104 PE=3 SV=1)
HSP 1 Score: 820.5 bits (2118), Expect = 3.6e-234
Identity = 421/456 (92.32%), Postives = 435/456 (95.39%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LY NAFICEAILRSLPPLAKKFVLQMLYI+APV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYGNAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLI GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIQGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDKE PRLTESGFQFLLMETNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AYDIDTLTEEQRYAIKDLADLGLVKLQQ + F+ PT ATNLSMSLADSSSRK
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSMSLADSSSRK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 QGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
+TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD
Sbjct: 361 IVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK 456
YAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Sbjct: 421 YAREWNGLLWEDSKTLRLVVKADIHTHMREHLRRQK 451
BLAST of MS010857 vs. ExPASy TrEMBL
Match:
A0A5A7UBE2 (RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003070 PE=3 SV=1)
HSP 1 Score: 786.2 bits (2029), Expect = 7.4e-224
Identity = 411/463 (88.77%), Postives = 423/463 (91.36%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
KSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLI+GEVL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 181 Q-------------------------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN 240
Q RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN
Sbjct: 181 QRLKSCSMYSSLYFARYLIKCYVWYSRDKEAPRLTESGFQFLLMETNAQLWYIIREYISN 240
Query: 241 SEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSA 300
+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQ
Sbjct: 241 AEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQG---RKE 300
Query: 301 TFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQL 360
++ I PT ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQL
Sbjct: 301 SWFI--PTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQL 360
Query: 361 PNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDL 420
PNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDL
Sbjct: 361 PNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDL 420
Query: 421 NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL 438
NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Sbjct: 421 NRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL 458
BLAST of MS010857 vs. TAIR 10
Match:
AT4G17020.2 (transcription factor-related )
HSP 1 Score: 683.3 bits (1762), Expect = 1.3e-196
Identity = 344/455 (75.60%), Postives = 396/455 (87.03%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AY+++TLTE Q +KDLADLGLVKLQQ + F+ PT ATNLS+SLADSS+RK
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSVSLADSSARK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
+GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI AITKESLYNAF NGIT++Q
Sbjct: 301 EGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD
Sbjct: 361 IITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ 455
+AREW GLLWEDSK MRLVVK++VH MRE L Q
Sbjct: 421 FAREWRGLLWEDSKRMRLVVKSEVHNQMREFLHTQ 450
BLAST of MS010857 vs. TAIR 10
Match:
AT4G17020.1 (transcription factor-related )
HSP 1 Score: 683.3 bits (1762), Expect = 1.3e-196
Identity = 344/455 (75.60%), Postives = 396/455 (87.03%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AY+++TLTE Q +KDLADLGLVKLQQ + F+ PT ATNLS+SLADSS+RK
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSVSLADSSARK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
+GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI AITKESLYNAF NGIT++Q
Sbjct: 301 EGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD
Sbjct: 361 IITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ 455
+AREW GLLWEDSK MRLVVK++VH MRE L Q
Sbjct: 421 FAREWRGLLWEDSKRMRLVVKSEVHNQMREFLHTQ 450
BLAST of MS010857 vs. TAIR 10
Match:
AT4G17020.3 (transcription factor-related )
HSP 1 Score: 683.3 bits (1762), Expect = 1.3e-196
Identity = 344/455 (75.60%), Postives = 396/455 (87.03%), Query Frame = 0
Query: 1 MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAA 60
MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 61 KSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIYGEVL 120
MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
REPM S+ ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE 240
QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240
Query: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK 300
AY+++TLTE Q +KDLADLGLVKLQQ + F+ PT ATNLS+SLADSS+RK
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQG--RKDSWFI---PTKLATNLSVSLADSSARK 300
Query: 301 QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 360
+GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI AITKESLYNAF NGIT++Q
Sbjct: 301 EGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQ 360
Query: 361 AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACD 420
ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHFYDEFPS++VFEAACD
Sbjct: 361 IITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFPSKDVFEAACD 420
Query: 421 YAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ 455
+AREW GLLWEDSK MRLVVK++VH MRE L Q
Sbjct: 421 FAREWRGLLWEDSKRMRLVVKSEVHNQMREFLHTQ 450
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022142125.1 | 4.2e-237 | 88.71 | RNA polymerase II transcription factor B subunit 2 [Momordica charantia] | [more] |
XP_004134713.1 | 1.2e-236 | 93.20 | general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis... | [more] |
XP_022977542.1 | 7.9e-236 | 92.76 | RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima] | [more] |
XP_038882460.1 | 1.0e-235 | 92.98 | general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Beninca... | [more] |
XP_023543805.1 | 5.1e-235 | 92.54 | RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q680U9 | 1.8e-195 | 75.60 | General transcription and DNA repair factor IIH subunit TFB2 OS=Arabidopsis thal... | [more] |
Q92759 | 7.0e-62 | 32.39 | General transcription factor IIH subunit 4 OS=Homo sapiens OX=9606 GN=GTF2H4 PE=... | [more] |
P60027 | 7.0e-62 | 32.39 | General transcription factor IIH subunit 4 OS=Pan troglodytes OX=9598 GN=GTF2H4 ... | [more] |
O70422 | 1.6e-61 | 32.59 | General transcription factor IIH subunit 4 OS=Mus musculus OX=10090 GN=Gtf2h4 PE... | [more] |
Q54C29 | 1.0e-60 | 30.82 | General transcription factor IIH subunit 4 OS=Dictyostelium discoideum OX=44689 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CK16 | 2.0e-237 | 88.71 | RNA polymerase II transcription factor B subunit 2 OS=Momordica charantia OX=367... | [more] |
A0A0A0KK55 | 5.9e-237 | 93.20 | RNA polymerase II transcription factor B subunit 2 OS=Cucumis sativus OX=3659 GN... | [more] |
A0A6J1IIT5 | 3.8e-236 | 92.76 | RNA polymerase II transcription factor B subunit 2 OS=Cucurbita maxima OX=3661 G... | [more] |
A0A6J1EGA7 | 3.6e-234 | 92.32 | RNA polymerase II transcription factor B subunit 2 OS=Cucurbita moschata OX=3662... | [more] |
A0A5A7UBE2 | 7.4e-224 | 88.77 | RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa O... | [more] |