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MS010856 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGTGTCTTCCATGAGAAAGTCGTTCAAGGACTCTCTCAAAGTGCTTGAAGCTGATATCCAGCACGCCAATACTCTGTAAGTGAGCTTTGATTTTCCTTTTCGCTTTCTCTCTGCTTATAATATCGTCTCTGACTGTCTGATCACTTTTGGGGTTCTGCCTGCTCCCCCTAATTTTACTTCAAATGCCATTTCTGGGTTTTTTTTTTTCTTTTTAGTATTCTGGTCCTTAAAGTTGCTGTTTACGGGTTTGTTTTTTATAATGTGTAATCTTCGTCAATTAATGATTTTCTGGAACGTGATCGTTGTTTACCTGCCATGTTTGGAGCTGGGCTGACTCATTTTAAGTAATTGATTTTTCAATGATGGTTTCTGTCTAGAGATAGAGACAAATTTCGCTTCTCTGTTTTGTAGCTCTACTTCTTGGAAGGGAAATGATTTACTCGTTCAATCAATTTTTACCTCTTGTTTTAGTGTGTAACCGTTGAGTCATTTTATCAATGTTCATTTCGTTCTTACTCCACATCGATAAATTTTGTCATCATTTTCATGAATGTTCTTGGGTTTCAGGGCTTTCTTGTGCCATCTGCATCTCTCTGTTGTATAGATTATGAATAATGATTGACATATTTTCAAACTCGGGAAGCTGATTCTTTGTATAGCTGTCACCTACTACTCGAATGTTGTTATGGTTCTCTCAATGGAATGCTTATTTTTGCAGTATCACTATTTCAACTCTCAAGTTTGCTATGATCTTCAGCCGATTCTGCTAATCCCTTAATCTTTTCTGTGCTTTTGTTACTTCTTGCCTTCATTTCCCGGAGTCCTTTGCTCTCTCTGTTCTGTATGATTTTAGGCATGTCACCTAGCTGTGGTGTCGCCCAATGAGATTATTCACTTACTTTTCCTCTGCCTGTAAAACAGAAATTTAAGATAATATGGCAGCTTCTCTGGGAGAGTACTTTGGAGCCCATTTAATCTTGTTTCTAGCTCTCGAGATGCTAGTGCTTTTCTATAACGTTTTTCATTTTTTAGATTTATTCCAGAAGCTGCATTTCTATTTAGTAATGTGATAATACCTTCCTTCTCCATTTTTCCTAATTATTATAAAAGGTATACTATCTTTTTTTGTTTCCTATCCCAAAAAAAAGGTATACTATCTTTTTAATTTAATAATACCAAATCTAGTAGGAAAAAAATTATAAATTATGAGAAATATGATTCTTTCCTTTTAAGAAAAGGAAAACAGAAAAAAGACACGATCCAATGGGTCCAATGGGTCGTAGTTTTTATATTGTACATCATGCTCTGTGCCCAGGTTATGAAAATTGACAGATAAATTAAAAAGTTGAAATGTTTGTATGCTAACAATTCCTTGCTATACTAAGAGATTCTCAAGATTGCTGGTTCTGTATCAGATATGTCAACTTAATGTTCTAATTATTCCTGAGTTGTAGGGCGTCGGATTTTCCAAGGGAATATGATGGCGCCTGCCTTCAGATGAGAATGTCATATAGTCCTGCTGCTCACTTGTTCCTATTCCTAGTGCAGTGGACAGACTGCCATCTTGCAGGAGCCCTGGGACTGCTGAGGATTTTAATTTACAAGGTCAAGTTTGTCACTTCATGGCATTAGATTTTGTAATCATCACTGAAATCCATTTTATATCCAGTCAGAGTTGCTAAATTCATCATGTGCCTTGTGCTTCAGGTGTACGTGGATGGCACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTATTCAAGTTCTGATTTTTCCATAATAGACCATGAGTTTTAATTGTTTGATGTATCTATACTTTTTGATAACTGATCTCTGTAATTGTGCTGTGGTCAGCTGTTATTTACCCCTCTCTATTGCAACTTGAGAGAGGTGTTACCGATACTGAGGATAAAAAGCAGAAGGCAGTCTGCATGGAAAGATACCGAAGAAGAGACGACGATGAACATATACAGTGTTCAGATGCGGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGTAAGGTTGTGTTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGTACTCACATCTCTTTTGTTCTCCTCTTTCAGTATTCTATATCACTTATGGCACTATAAGGTATAAATTATGGATTCTTGAGGCAATCTACAGAGGCTCTATCAAAATTTCCCTATACACCCTTATATTTTCTTGTCTTCATTAATTACAAAAACTGCTGTGTCTGAAGCCTTCTGTTCATCTCTAGTGAATTGGATGGATGCATCATGATGTTTCTTTTGATGTGCTAGATCAAGGCAATTAATTGTCTGATATCCTTTGCTTTATAACTTACCAGAAATATTGTCGATGCGATTTATTCTTTCTTGGATTCAATCCTGGACATTCTTTGATTCCTTCTCTCTGTTTTGGTAGCTAATTGTAATGAATAATTGACTTGTGATTAGATAGGGTGTTTCAAGCTGTGCTCGTGGTTTGGCATGTTGATTCCTTTATGTATTAGGAATAAAAATACGCATTAATCTTATACAATGCTTTGCCGCTGAATTGTTAGTTTTCTACAAACTGATTATTATTGTAAATTATCTACTTCTCGATGGCATTGGTCATTTTTAATCAACTATAAAGGCCGTAGTTAAAGGTTCTCAACTGCCCGATGCCTTAGAACTGCATTCTAAGGACCTGATAGATTATAGACTTAGCTTTTGTTCGATATCAATGAGGGCTTCTGTTGGATTTTTCTCTGACTGCATTCTTATTTAACTTCTTGATACATCATGCCAACCTCAATTGAATGTACTTTTCAGGAGAACACGTTCACAGTCTTGCCCATTCTGTCGTGACAGTCTCAAGAGAGTAAACTCTGGCGATCTCTGGGTATTCACTGATAACAGGGACATTGTGGACATGGCAACAGTGTCACGAGAGAATCTCAGAAGGCTTTTCATGTACATAGAGAAACTGCCTCTGGTTGTTCCAGATTCCCTTTTCGACGCCTACGATACGCACCTAAGA ATGTATGTGTCTTCCATGAGAAAGTCGTTCAAGGACTCTCTCAAAGTGCTTGAAGCTGATATCCAGCACGCCAATACTCTGGCGTCGGATTTTCCAAGGGAATATGATGGCGCCTGCCTTCAGATGAGAATGTCATATAGTCCTGCTGCTCACTTGTTCCTATTCCTAGTGCAGTGGACAGACTGCCATCTTGCAGGAGCCCTGGGACTGCTGAGGATTTTAATTTACAAGGTGTACGTGGATGGCACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCCTCTCTATTGCAACTTGAGAGAGGTGTTACCGATACTGAGGATAAAAAGCAGAAGGCAGTCTGCATGGAAAGATACCGAAGAAGAGACGACGATGAACATATACAGTGTTCAGATGCGGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGTAAGGTTGTGTTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGAGAACACGTTCACAGTCTTGCCCATTCTGTCGTGACAGTCTCAAGAGAGTAAACTCTGGCGATCTCTGGGTATTCACTGATAACAGGGACATTGTGGACATGGCAACAGTGTCACGAGAGAATCTCAGAAGGCTTTTCATGTACATAGAGAAACTGCCTCTGGTTGTTCCAGATTCCCTTTTCGACGCCTACGATACGCACCTAAGA ATGTATGTGTCTTCCATGAGAAAGTCGTTCAAGGACTCTCTCAAAGTGCTTGAAGCTGATATCCAGCACGCCAATACTCTGGCGTCGGATTTTCCAAGGGAATATGATGGCGCCTGCCTTCAGATGAGAATGTCATATAGTCCTGCTGCTCACTTGTTCCTATTCCTAGTGCAGTGGACAGACTGCCATCTTGCAGGAGCCCTGGGACTGCTGAGGATTTTAATTTACAAGGTGTACGTGGATGGCACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCCTCTCTATTGCAACTTGAGAGAGGTGTTACCGATACTGAGGATAAAAAGCAGAAGGCAGTCTGCATGGAAAGATACCGAAGAAGAGACGACGATGAACATATACAGTGTTCAGATGCGGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGTAAGGTTGTGTTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGAGAACACGTTCACAGTCTTGCCCATTCTGTCGTGACAGTCTCAAGAGAGTAAACTCTGGCGATCTCTGGGTATTCACTGATAACAGGGACATTGTGGACATGGCAACAGTGTCACGAGAGAATCTCAGAAGGCTTTTCATGTACATAGAGAAACTGCCTCTGGTTGTTCCAGATTCCCTTTTCGACGCCTACGATACGCACCTAAGA MYVSSMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLERGVTDTEDKKQKAVCMERYRRRDDDEHIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVSRENLRRLFMYIEKLPLVVPDSLFDAYDTHLR Homology
BLAST of MS010856 vs. NCBI nr
Match: XP_022142126.1 (uncharacterized protein LOC111012327 [Momordica charantia]) HSP 1 Score: 509.2 bits (1310), Expect = 2.0e-140 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of MS010856 vs. NCBI nr
Match: XP_008439874.1 (PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo] >KAA0052696.1 RING finger protein 141 [Cucumis melo var. makuwa] >TYK13128.1 RING finger protein 141 [Cucumis melo var. makuwa]) HSP 1 Score: 485.0 bits (1247), Expect = 4.0e-133 Identity = 235/247 (95.14%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. NCBI nr
Match: XP_038883362.1 (E3 ubiquitin-protein ligase AIRP2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 483.8 bits (1244), Expect = 8.9e-133 Identity = 234/247 (94.74%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. NCBI nr
Match: XP_004134714.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Cucumis sativus] >KGN49217.1 hypothetical protein Csa_002951 [Cucumis sativus]) HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132 Identity = 234/247 (94.74%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. NCBI nr
Match: XP_022950103.1 (uncharacterized protein LOC111453288 isoform X1 [Cucurbita moschata]) HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132 Identity = 231/247 (93.52%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.4e-95 Identity = 160/231 (69.26%), Postives = 193/231 (83.55%), Query Frame = 0
BLAST of MS010856 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3) HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06 Identity = 27/68 (39.71%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of MS010856 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06 Identity = 27/68 (39.71%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of MS010856 vs. ExPASy Swiss-Prot
Match: Q9QXP6 (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus OX=10090 GN=Mkrn1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06 Identity = 27/68 (39.71%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of MS010856 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.6e-06 Identity = 26/72 (36.11%), Postives = 36/72 (50.00%), Query Frame = 0
BLAST of MS010856 vs. ExPASy TrEMBL
Match: A0A6J1CLA5 (uncharacterized protein LOC111012327 OS=Momordica charantia OX=3673 GN=LOC111012327 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 9.5e-141 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of MS010856 vs. ExPASy TrEMBL
Match: A0A5D3CPM3 (RING finger protein 141 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007380 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133 Identity = 235/247 (95.14%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. ExPASy TrEMBL
Match: A0A1S3AZR9 (uncharacterized protein LOC103484529 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484529 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133 Identity = 235/247 (95.14%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. ExPASy TrEMBL
Match: A0A0A0KLG2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517250 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 5.6e-133 Identity = 234/247 (94.74%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. ExPASy TrEMBL
Match: A0A6J1GDY9 (uncharacterized protein LOC111453288 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453288 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132 Identity = 231/247 (93.52%), Postives = 241/247 (97.57%), Query Frame = 0
BLAST of MS010856 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 357.8 bits (917), Expect = 6.8e-99 Identity = 166/241 (68.88%), Postives = 198/241 (82.16%), Query Frame = 0
BLAST of MS010856 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97 Identity = 171/241 (70.95%), Postives = 196/241 (81.33%), Query Frame = 0
BLAST of MS010856 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein ) HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96 Identity = 166/253 (65.61%), Postives = 198/253 (78.26%), Query Frame = 0
BLAST of MS010856 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein ) HSP 1 Score: 349.4 bits (895), Expect = 2.4e-96 Identity = 160/231 (69.26%), Postives = 193/231 (83.55%), Query Frame = 0
BLAST of MS010856 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein ) HSP 1 Score: 322.0 bits (824), Expect = 4.2e-88 Identity = 159/241 (65.98%), Postives = 183/241 (75.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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