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MS010819 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGATTTTGCAATGCAACAAAGTTCATGGAGTAGAAAGTGGAGACACCTGCTTTGCTCTTTCCCGAACATTTAAATTGAGTACTACACAATTTAATTTTATTAATCCAAATATCAATTGCTCCAATCTCTTTATTGGTCAGTGGGTTTGCGTCAATGGGTTCATCGGC TTGATTTTGCAATGCAACAAAGTTCATGGAGTAGAAAGTGGAGACACCTGCTTTGCTCTTTCCCGAACATTTAAATTGAGTACTACACAATTTAATTTTATTAATCCAAATATCAATTGCTCCAATCTCTTTATTGGTCAGTGGGTTTGCGTCAATGGGTTCATCGGC TTGATTTTGCAATGCAACAAAGTTCATGGAGTAGAAAGTGGAGACACCTGCTTTGCTCTTTCCCGAACATTTAAATTGAGTACTACACAATTTAATTTTATTAATCCAAATATCAATTGCTCCAATCTCTTTATTGGTCAGTGGGTTTGCGTCAATGGGTTCATCGGC LILQCNKVHGVESGDTCFALSRTFKLSTTQFNFINPNINCSNLFIGQWVCVNGFIG Homology
BLAST of MS010819 vs. NCBI nr
Match: XP_016899229.1 (PREDICTED: lysM domain-containing protein ARB_00327-like [Cucumis melo]) HSP 1 Score: 97.8 bits (242), Expect = 3.1e-17 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of MS010819 vs. NCBI nr
Match: KGN49182.1 (hypothetical protein Csa_004378 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 6.5e-15 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS010819 vs. NCBI nr
Match: XP_031742455.1 (lysM domain-containing protein ARB_00327-like [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 6.5e-15 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS010819 vs. NCBI nr
Match: KGN49183.1 (hypothetical protein Csa_003390 [Cucumis sativus]) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 33/55 (60.00%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS010819 vs. NCBI nr
Match: KVH96602.1 (Peptidoglycan-binding lysin domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12 Identity = 29/53 (54.72%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of MS010819 vs. ExPASy TrEMBL
Match: A0A1S4DTB4 (lysM domain-containing protein ARB_00327-like OS=Cucumis melo OX=3656 GN=LOC107990452 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of MS010819 vs. ExPASy TrEMBL
Match: A0A0A0KLD2 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516900 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS010819 vs. ExPASy TrEMBL
Match: A0A0A0KHZ8 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516910 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.7e-13 Identity = 33/55 (60.00%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS010819 vs. ExPASy TrEMBL
Match: A0A103XTI0 (Peptidoglycan-binding lysin domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_001313 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.5e-13 Identity = 29/53 (54.72%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of MS010819 vs. ExPASy TrEMBL
Match: A0A498IRU4 (LysM domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_017119 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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