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MS010818 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAGGCTGTGACCTCAATTGCCATGAATCTTACCTTCCTGTTCGCCCTCTCTCTTCTCATCCTCTCAATTTCTGTCCAAAGTCGATCTCTCTTCCGTAAGTTCTTCATTTTTTAGATAATATTATCACACTCTCATTCTAAGCCTCATTACCTAATTAACTAATTAAGAAGGTAGAATGATTGAATTTTTATATATACTCTTAAAAGTTTTATTATACATCACAGGTGGATTGAATTTGCAATGCAACACAGTTTATGGAGTACAGAATGGAGACACATGCTTCGCTATTGTCCAGACATTTAAATTGAGCACTGCACGATTCAATTTTATTAATCCAAATATCAATTGCTCTGATCTCTTCGTTGGTCAGTGGGTTTGCGTGAATGGCTTTCTCGTC ATGGCCAAGGCTGTGACCTCAATTGCCATGAATCTTACCTTCCTGTTCGCCCTCTCTCTTCTCATCCTCTCAATTTCTGTCCAAAGTCGATCTCTCTTCCTTTTATTATACATCACAGGTGGATTGAATTTGCAATGCAACACAGTTTATGGAGTACAGAATGGAGACACATGCTTCGCTATTGTCCAGACATTTAAATTGAGCACTGCACGATTCAATTTTATTAATCCAAATATCAATTGCTCTGATCTCTTCGTTGGTCAGTGGGTTTGCGTGAATGGCTTTCTCGTC ATGGCCAAGGCTGTGACCTCAATTGCCATGAATCTTACCTTCCTGTTCGCCCTCTCTCTTCTCATCCTCTCAATTTCTGTCCAAAGTCGATCTCTCTTCCTTTTATTATACATCACAGGTGGATTGAATTTGCAATGCAACACAGTTTATGGAGTACAGAATGGAGACACATGCTTCGCTATTGTCCAGACATTTAAATTGAGCACTGCACGATTCAATTTTATTAATCCAAATATCAATTGCTCTGATCTCTTCGTTGGTCAGTGGGTTTGCGTGAATGGCTTTCTCGTC MAKAVTSIAMNLTFLFALSLLILSISVQSRSLFLLLYITGGLNLQCNTVYGVQNGDTCFAIVQTFKLSTARFNFINPNINCSDLFVGQWVCVNGFLV Homology
BLAST of MS010818 vs. NCBI nr
Match: KGN49182.1 (hypothetical protein Csa_004378 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 4.0e-20 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of MS010818 vs. NCBI nr
Match: KGN49183.1 (hypothetical protein Csa_003390 [Cucumis sativus]) HSP 1 Score: 107.5 bits (267), Expect = 6.8e-20 Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of MS010818 vs. NCBI nr
Match: XP_016899229.1 (PREDICTED: lysM domain-containing protein ARB_00327-like [Cucumis melo]) HSP 1 Score: 104.0 bits (258), Expect = 7.5e-19 Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of MS010818 vs. NCBI nr
Match: XP_031742455.1 (lysM domain-containing protein ARB_00327-like [Cucumis sativus]) HSP 1 Score: 102.1 bits (253), Expect = 2.8e-18 Identity = 56/96 (58.33%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of MS010818 vs. NCBI nr
Match: KZN07240.1 (hypothetical protein DCAR_008077 [Daucus carota subsp. sativus]) HSP 1 Score: 87.0 bits (214), Expect = 9.5e-14 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of MS010818 vs. ExPASy TrEMBL
Match: A0A0A0KLD2 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516900 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.9e-20 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of MS010818 vs. ExPASy TrEMBL
Match: A0A0A0KHZ8 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516910 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.3e-20 Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of MS010818 vs. ExPASy TrEMBL
Match: A0A1S4DTB4 (lysM domain-containing protein ARB_00327-like OS=Cucumis melo OX=3656 GN=LOC107990452 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.6e-19 Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of MS010818 vs. ExPASy TrEMBL
Match: A0A166F1W1 (LysM domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008077 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.6e-14 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of MS010818 vs. ExPASy TrEMBL
Match: A0A067K3Z8 (LysM domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_17692 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.0e-13 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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