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MS010807 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACATTGTGCTCGCTGTGCAAGTCTCCGGCGAATGTGGTGTGTGGAGCAGACGAAGCGAGGCTGTGTTGGGGGTGCGATTGGAAGGTTCACGCCGCCAATTTTCTGGTTGGGAAGCATTTGAGGGTTTTGCTCTGCCATGGCTGCCAGGCTCCGACGCCGTGGAATGGGTCTGGGCCCAGGCTCGTGCCGACGGTGTCGTTTTGCCAAAACTGCGCTGACATTAGAGAGGAAGGATGTGGGAGCTCCAATGGCGGGAGCGGATGCGACGATGATGACGACGAGATGGAAAATCAAGTGGTTCCTTGGTTATCCCTCTCCTCCCAC ATGAAGACATTGTGCTCGCTGTGCAAGTCTCCGGCGAATGTGGTGTGTGGAGCAGACGAAGCGAGGCTGTGTTGGGGGTGCGATTGGAAGGTTCACGCCGCCAATTTTCTGGTTGGGAAGCATTTGAGGGTTTTGCTCTGCCATGGCTGCCAGGCTCCGACGCCGTGGAATGGGTCTGGGCCCAGGCTCGTGCCGACGGTGTCGTTTTGCCAAAACTGCGCTGACATTAGAGAGGAAGGATGTGGGAGCTCCAATGGCGGGAGCGGATGCGACGATGATGACGACGAGATGGAAAATCAAGTGGTTCCTTGGTTATCCCTCTCCTCCCAC ATGAAGACATTGTGCTCGCTGTGCAAGTCTCCGGCGAATGTGGTGTGTGGAGCAGACGAAGCGAGGCTGTGTTGGGGGTGCGATTGGAAGGTTCACGCCGCCAATTTTCTGGTTGGGAAGCATTTGAGGGTTTTGCTCTGCCATGGCTGCCAGGCTCCGACGCCGTGGAATGGGTCTGGGCCCAGGCTCGTGCCGACGGTGTCGTTTTGCCAAAACTGCGCTGACATTAGAGAGGAAGGATGTGGGAGCTCCAATGGCGGGAGCGGATGCGACGATGATGACGACGAGATGGAAAATCAAGTGGTTCCTTGGTTATCCCTCTCCTCCCAC MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSSNGGSGCDDDDDEMENQVVPWLSLSSH Homology
BLAST of MS010807 vs. NCBI nr
Match: XP_022950367.1 (putative zinc finger protein At1g68190 [Cucurbita moschata]) HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39 Identity = 84/127 (66.14%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of MS010807 vs. NCBI nr
Match: XP_023544021.1 (zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39 Identity = 84/127 (66.14%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of MS010807 vs. NCBI nr
Match: KAG6603735.1 (B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39 Identity = 84/127 (66.14%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of MS010807 vs. NCBI nr
Match: TYK13089.1 (putative zinc finger protein [Cucumis melo var. makuwa]) HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39 Identity = 84/124 (67.74%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of MS010807 vs. NCBI nr
Match: XP_022977340.1 (zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]) HSP 1 Score: 170.2 bits (430), Expect = 9.6e-39 Identity = 84/127 (66.14%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of MS010807 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.4e-10 Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of MS010807 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 8.3e-09 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of MS010807 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.1e-08 Identity = 38/90 (42.22%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of MS010807 vs. ExPASy Swiss-Prot
Match: O82256 (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana OX=3702 GN=COL13 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.0e-08 Identity = 33/72 (45.83%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of MS010807 vs. ExPASy Swiss-Prot
Match: Q9C9F4 (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.0e-08 Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of MS010807 vs. ExPASy TrEMBL
Match: A0A0A0KHH6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516780 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39 Identity = 81/121 (66.94%), Postives = 88/121 (72.73%), Query Frame = 0
BLAST of MS010807 vs. ExPASy TrEMBL
Match: A0A6J1GEL4 (putative zinc finger protein At1g68190 OS=Cucurbita moschata OX=3662 GN=LOC111453480 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39 Identity = 84/127 (66.14%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of MS010807 vs. ExPASy TrEMBL
Match: A0A5D3CS61 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006970 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39 Identity = 84/124 (67.74%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of MS010807 vs. ExPASy TrEMBL
Match: A0A6J1IM17 (zinc finger protein CONSTANS-LIKE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111477691 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.7e-39 Identity = 84/127 (66.14%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of MS010807 vs. ExPASy TrEMBL
Match: A0A5A7UBH5 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003480 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.1e-39 Identity = 83/125 (66.40%), Postives = 89/125 (71.20%), Query Frame = 0
BLAST of MS010807 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein ) HSP 1 Score: 104.8 bits (260), Expect = 4.6e-23 Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of MS010807 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein ) HSP 1 Score: 102.1 bits (253), Expect = 3.0e-22 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of MS010807 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 ) HSP 1 Score: 65.5 bits (158), Expect = 3.1e-11 Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of MS010807 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
BLAST of MS010807 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 ) HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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