Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGATGTCAATTAC
mRNA sequence
ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGATGTCAATTAC
Coding sequence (CDS)
ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATCGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCACTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGAAGATGTCAATTAC
Protein sequence
MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVNY
Homology
BLAST of MS010784 vs. NCBI nr
Match:
XP_022142335.1 (uncharacterized protein LOC111012477 [Momordica charantia])
HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR
Sbjct: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN
Sbjct: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
Query: 121 Y 122
Y
Sbjct: 121 Y 121
BLAST of MS010784 vs. NCBI nr
Match:
XP_022926407.1 (uncharacterized protein LOC111433571 [Cucurbita moschata] >KAG7026623.1 hypothetical protein SDJN02_10625, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DSK SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK+DV
Sbjct: 61 RSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. NCBI nr
Match:
KAG6594656.1 (hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 204.5 bits (519), Expect = 5.1e-49
Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DSK SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK DV
Sbjct: 61 RSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKNDVT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. NCBI nr
Match:
XP_023003961.1 (uncharacterized protein LOC111497407 [Cucurbita maxima])
HSP 1 Score: 203.8 bits (517), Expect = 8.7e-49
Identity = 98/121 (80.99%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DS+ SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK+D+
Sbjct: 61 RSDSRTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDIT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. NCBI nr
Match:
XP_023518155.1 (uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SF E+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFCEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DSK SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK+DV
Sbjct: 61 RSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. ExPASy TrEMBL
Match:
A0A6J1CKN5 (uncharacterized protein LOC111012477 OS=Momordica charantia OX=3673 GN=LOC111012477 PE=4 SV=1)
HSP 1 Score: 246.5 bits (628), Expect = 5.6e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR
Sbjct: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN
Sbjct: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
Query: 121 Y 122
Y
Sbjct: 121 Y 121
BLAST of MS010784 vs. ExPASy TrEMBL
Match:
A0A6J1EEE9 (uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC111433571 PE=4 SV=1)
HSP 1 Score: 205.3 bits (521), Expect = 1.4e-49
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DSK SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK+DV
Sbjct: 61 RSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. ExPASy TrEMBL
Match:
A0A6J1KQQ8 (uncharacterized protein LOC111497407 OS=Cucurbita maxima OX=3661 GN=LOC111497407 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 4.2e-49
Identity = 98/121 (80.99%), Postives = 111/121 (91.74%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1 MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120
R DS+ SFWLLS +WKWKKRR + NGILPNICSAVELSKSNRFNGIPGFGYRILK+D+
Sbjct: 61 RSDSRTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDIT 119
Query: 121 Y 122
+
Sbjct: 121 H 119
BLAST of MS010784 vs. ExPASy TrEMBL
Match:
A0A6J1IJL8 (uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 3.3e-46
Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60
MYKG+S SRSFSEKM +APLAIGTRGTVGSLVMKEIEYFTK E+ERHG SQRI+ +ASR
Sbjct: 1 MYKGMSRSRSFSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASR 60
Query: 61 RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 119
R D K SFWL+S TWKWKKR+ NGILPNICSAVELSKSNRFNGIPGF YRILK D
Sbjct: 61 RSDCKGSFWLVSLTWKWKKRK--GNNGILPNICSAVELSKSNRFNGIPGFSYRILKHD 116
BLAST of MS010784 vs. ExPASy TrEMBL
Match:
A0A5D3CRM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006580 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 5.3e-44
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 1 MYKGISTSRSFSEKM-GSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEAS 60
MYKG+S SRSFSEKM G+VAPLAIGTRGTVGSLVMKEIEYFT LELERHG S I A
Sbjct: 1 MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNAL 60
Query: 61 RRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 119
RR DSK SFWLLS TWKWKKR+ + NGILPNI SAVE SKSNRFNGIPGFGYRILK+D
Sbjct: 61 RRSDSKGSFWLLSLTWKWKKRK--NNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDD 117
BLAST of MS010784 vs. TAIR 10
Match:
AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0
Query: 19 APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGGSQ--RITAEASRRGDSKPSFWL 78
AP+AIGTRGT+GSLV KEI+YF R G S+ + T + R S+ W
Sbjct: 3 APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62
Query: 79 LSSTWKWKKRRS-GSTNGILPNICSAVELSKSNRFNGIPGFGYRILKED 119
+ W+ KKR++ G P++CSAVE+S NR +PGF YRILK D
Sbjct: 63 SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022142335.1 | 1.2e-61 | 100.00 | uncharacterized protein LOC111012477 [Momordica charantia] | [more] |
XP_022926407.1 | 3.0e-49 | 82.64 | uncharacterized protein LOC111433571 [Cucurbita moschata] >KAG7026623.1 hypothet... | [more] |
KAG6594656.1 | 5.1e-49 | 82.64 | hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023003961.1 | 8.7e-49 | 80.99 | uncharacterized protein LOC111497407 [Cucurbita maxima] | [more] |
XP_023518155.1 | 1.1e-48 | 81.82 | uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CKN5 | 5.6e-62 | 100.00 | uncharacterized protein LOC111012477 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1EEE9 | 1.4e-49 | 82.64 | uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC1114335... | [more] |
A0A6J1KQQ8 | 4.2e-49 | 80.99 | uncharacterized protein LOC111497407 OS=Cucurbita maxima OX=3661 GN=LOC111497407... | [more] |
A0A6J1IJL8 | 3.3e-46 | 80.51 | uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686... | [more] |
A0A5D3CRM5 | 5.3e-44 | 80.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT4G21780.1 | 2.1e-16 | 44.04 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |