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MS010780 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAACTGCTGCAGAGGCGGAGCGTCAACTGTGGTGGCGGCCGGCGAGGAGCGGAGGGATCCGCCGCCGGAGAAGCATTCCGACGAGAAAGGGGCCGGGGGTGGCTTGAGATCGGAGGTGAAGATAAGGATGACGAAGAAGGAGCTGGAGGAGTTGGTGGGATGGTTGAACATGGCGGATTCTAGTTTTGAACAGGTTATGGCTCGCCTCGTCAGCGTGATTACCGATCCGCGTGGCGATGGACGTGATGACGGTACTGCCCAGGTGGCGCGTCTACGTCAGCAACGTTCGTGTTCCTGGAGGCCTTCTCTGCACAGCATTCCAGAGATTAAT ATGGGTAACTGCTGCAGAGGCGGAGCGTCAACTGTGGTGGCGGCCGGCGAGGAGCGGAGGGATCCGCCGCCGGAGAAGCATTCCGACGAGAAAGGGGCCGGGGGTGGCTTGAGATCGGAGGTGAAGATAAGGATGACGAAGAAGGAGCTGGAGGAGTTGGTGGGATGGTTGAACATGGCGGATTCTAGTTTTGAACAGGTTATGGCTCGCCTCGTCAGCGTGATTACCGATCCGCGTGGCGATGGACGTGATGACGGTACTGCCCAGGTGGCGCGTCTACGTCAGCAACGTTCGTGTTCCTGGAGGCCTTCTCTGCACAGCATTCCAGAGATTAAT ATGGGTAACTGCTGCAGAGGCGGAGCGTCAACTGTGGTGGCGGCCGGCGAGGAGCGGAGGGATCCGCCGCCGGAGAAGCATTCCGACGAGAAAGGGGCCGGGGGTGGCTTGAGATCGGAGGTGAAGATAAGGATGACGAAGAAGGAGCTGGAGGAGTTGGTGGGATGGTTGAACATGGCGGATTCTAGTTTTGAACAGGTTATGGCTCGCCTCGTCAGCGTGATTACCGATCCGCGTGGCGATGGACGTGATGACGGTACTGCCCAGGTGGCGCGTCTACGTCAGCAACGTTCGTGTTCCTGGAGGCCTTCTCTGCACAGCATTCCAGAGATTAAT MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN Homology
BLAST of MS010780 vs. NCBI nr
Match: XP_022977330.1 (uncharacterized protein LOC111477681 [Cucurbita maxima]) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25 Identity = 74/126 (58.73%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of MS010780 vs. NCBI nr
Match: XP_008441100.1 (PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo] >TYK13052.1 hypothetical protein E5676_scaffold255G006540 [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 4.7e-25 Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of MS010780 vs. NCBI nr
Match: XP_023544016.1 (uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24 Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of MS010780 vs. NCBI nr
Match: KAG6603773.1 (hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24 Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of MS010780 vs. NCBI nr
Match: KAG7033944.1 (hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.9 bits (307), Expect = 1.8e-24 Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of MS010780 vs. ExPASy TrEMBL
Match: A0A6J1IM02 (uncharacterized protein LOC111477681 OS=Cucurbita maxima OX=3661 GN=LOC111477681 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 74/126 (58.73%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of MS010780 vs. ExPASy TrEMBL
Match: A0A5D3CNX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006540 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.3e-25 Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of MS010780 vs. ExPASy TrEMBL
Match: A0A1S3B2N5 (uncharacterized protein LOC103485326 OS=Cucumis melo OX=3656 GN=LOC103485326 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.3e-25 Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of MS010780 vs. ExPASy TrEMBL
Match: A0A0A0KHU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514300 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.4e-24 Identity = 67/115 (58.26%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of MS010780 vs. ExPASy TrEMBL
Match: A0A218XM66 (uncharacterized protein LOC116207121 OS=Punica granatum OX=22663 GN=LOC116207121 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-08 Identity = 49/139 (35.25%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of MS010780 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ) HSP 1 Score: 43.9 bits (102), Expect = 9.9e-05 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of MS010780 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.7e-04 Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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