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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAAATGGAACAGAAACAGAGGAGCTGGATTCAGTTGAGAAAAGAAGAACAAATAAAGTGGTTCCTTCTTTAAAAAGTTCAACTTTTGAACAAAGAAAGGCCGAATCACGAGACGCCCCTGAAATATCTGCCCTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTCCTCCTTATCATTATACACAACCG mRNA sequence ATGGGAAATGGAACAGAAACAGAGGAGCTGGATTCAGTTGAGAAAAGAAGAACAAATAAAGTGGTTCCTTCTTTAAAAAGTTCAACTTTTGAACAAAGAAAGGCCGAATCACGAGACGCCCCTGAAATATCTGCCCTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTCCTCCTTATCATTATACACAACCG Coding sequence (CDS) ATGGGAAATGGAACAGAAACAGAGGAGCTGGATTCAGTTGAGAAAAGAAGAACAAATAAAGTGGTTCCTTCTTTAAAAAGTTCAACTTTTGAACAAAGAAAGGCCGAATCACGAGACGCCCCTGAAATATCTGCCCTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTCCTCCTTATCATTATACACAACCG Protein sequence MGNGTETEELDSVEKRRTNKVVPSLKSSTFEQRKAESRDAPEISALFHCLSTAKRPNPPPYHYTQP
Homology
BLAST of MS010737 vs. NCBI nr
Match: KGN49068.1 (hypothetical protein Csa_004245 [Cucumis sativus]) HSP 1 Score: 114.4 bits (285), Expect = 3.8e-22 Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0 Query: 1 MGNGTETEELDSVEKRRTNKVVPSLKSSTFEQRKAESRDAPEISALFHCLSTAKRPNPPP 60 MGN TETEELDSVEKRRTNK VPSLKSSTF+QR A+SRDA E+SALFHCLSTAKRPNP P Sbjct: 1 MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60
Query: 61 YHYTQP 67 YH+T+P Sbjct: 61 YHHTEP 66
BLAST of MS010737 vs. ExPASy TrEMBL
Match: A0A0A0KHR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511840 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22 Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0 Query: 1 MGNGTETEELDSVEKRRTNKVVPSLKSSTFEQRKAESRDAPEISALFHCLSTAKRPNPPP 60 MGN TETEELDSVEKRRTNK VPSLKSSTF+QR A+SRDA E+SALFHCLSTAKRPNP P Sbjct: 1 MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60
Query: 61 YHYTQP 67 YH+T+P Sbjct: 61 YHHTEP 66
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN49068.1 | 3.8e-22 | 84.85 | hypothetical protein Csa_004245 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KHR2 | 1.8e-22 | 84.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511840 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..41 |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS010737.1 | MS010737.1 | mRNA |
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