Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAACATGAACAACATTGACCGGCCCCCACTTGTTGCTCCCTCCTCCATTGCTCTGCTTCAACAGCGCTTCAGAGACCTCCACAGAGTCAAGCAAATGAGGGAGGAGAGGGAGCTTCTCAAATTGCTCTCCCTTTCTTCCCACACCCTCCTCCACTTTCCTACTGCCGTTGGCACCTTCTTTTGGCGTCCGGAGTTGATGATGATCACCGCCGCCGCCCCACCTCGGACATCTCTATCCCTCTCCCCGATCTCGCAACCCCAGAAGGTTGGCGCCGAGGTGGCGCCGCTCGTCGACTTATGGCCAGCGCCTGATGCCATCAATGCTTGTGATGATCGTAGCACCGCCTCGTTAATTAGAATTGATGACGACGACAATATTGATGATTCGGACTCGTGTTCCGAGGTTGATACTTCTCTTCACTTG
mRNA sequence
ACAAACATGAACAACATTGACCGGCCCCCACTTGTTGCTCCCTCCTCCATTGCTCTGCTTCAACAGCGCTTCAGAGACCTCCACAGAGTCAAGCAAATGAGGGAGGAGAGGGAGCTTCTCAAATTGCTCTCCCTTTCTTCCCACACCCTCCTCCACTTTCCTACTGCCGTTGGCACCTTCTTTTGGCGTCCGGAGTTGATGATGATCACCGCCGCCGCCCCACCTCGGACATCTCTATCCCTCTCCCCGATCTCGCAACCCCAGAAGGTTGGCGCCGAGGTGGCGCCGCTCGTCGACTTATGGCCAGCGCCTGATGCCATCAATGCTTGTGATGATCGTAGCACCGCCTCGTTAATTAGAATTGATGACGACGACAATATTGATGATTCGGACTCGTGTTCCGAGGTTGATACTTCTCTTCACTTG
Coding sequence (CDS)
ACAAACATGAACAACATTGACCGGCCCCCACTTGTTGCTCCCTCCTCCATTGCTCTGCTTCAACAGCGCTTCAGAGACCTCCACAGAGTCAAGCAAATGAGGGAGGAGAGGGAGCTTCTCAAATTGCTCTCCCTTTCTTCCCACACCCTCCTCCACTTTCCTACTGCCGTTGGCACCTTCTTTTGGCGTCCGGAGTTGATGATGATCACCGCCGCCGCCCCACCTCGGACATCTCTATCCCTCTCCCCGATCTCGCAACCCCAGAAGGTTGGCGCCGAGGTGGCGCCGCTCGTCGACTTATGGCCAGCGCCTGATGCCATCAATGCTTGTGATGATCGTAGCACCGCCTCGTTAATTAGAATTGATGACGACGACAATATTGATGATTCGGACTCGTGTTCCGAGGTTGATACTTCTCTTCACTTG
Protein sequence
TNMNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
Homology
BLAST of MS010717 vs. NCBI nr
Match:
KAG6594702.1 (hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 80.5 bits (197), Expect = 1.3e-11
Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 9 PPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSS-------HTLLHFPTAVGTFF 68
P LV SSIALLQ+RFR L +VK+MREEREL++LLSLS+ +T + F +V T
Sbjct: 10 PSLVVQSSIALLQERFRQLQKVKEMREERELVRLLSLSNPKKHGLFNTCVLFEPSVATMM 69
Query: 69 WRPELMMITAAAP-----PRTSLSLSPIS-QPQK-----VGAEVAPLVDLWPAPDAINAC 128
P T A P+TSLSL P S P K V +V L++LWP +
Sbjct: 70 MLPTTTTTTMTATKMLTLPQTSLSLWPTSPSPGKKLTVGVDVDVPALMNLWPVDSVTTST 129
Query: 129 DDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL 143
+++ I ++ +SDS +VDTSLHL
Sbjct: 130 SSSCDSAISLISKLEHDHESDSDIDVDTSLHL 161
BLAST of MS010717 vs. NCBI nr
Match:
KAG5039132.1 (hypothetical protein JHK86_019972 [Glycine max] >KHN42280.1 hypothetical protein glysoja_042028 [Glycine soja] >KRH51176.1 hypothetical protein GLYMA_07G266600v4 [Glycine max] >RZC04828.1 hypothetical protein D0Y65_019093 [Glycine soja])
HSP 1 Score: 73.6 bits (179), Expect = 1.6e-09
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0
Query: 10 PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMI 69
P V SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S + + FF PEL++
Sbjct: 8 PTVFRSSIVLLQERFRQLHRVKEMRKKKELLKMLTTSEPKPFNSNPTMRQFF-HPELIIP 67
Query: 70 TAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDD 129
+ ++PP SLSL P SQP + +D AP A N ST + + NI D
Sbjct: 68 SRSSPPHVSLSLGPTSQPMQ--EYTKSTID---APVANNMLSIDSTHNQVSC---KNIYD 127
Query: 130 SDSCSE--VDTSLHL 143
DS ++ VDTSLHL
Sbjct: 128 WDSGTDSIVDTSLHL 133
BLAST of MS010717 vs. NCBI nr
Match:
XP_042942642.1 (uncharacterized protein LOC122276805 [Carya illinoinensis] >KAG2688587.1 hypothetical protein I3760_09G103000 [Carya illinoinensis] >KAG6641895.1 hypothetical protein CIPAW_09G105400 [Carya illinoinensis] >KAG6695538.1 hypothetical protein I3842_09G102900 [Carya illinoinensis] >KAG7963131.1 hypothetical protein I3843_09G103500 [Carya illinoinensis])
HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 0
Query: 7 DRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSH------------TLLHFP 66
D ++ SSIALLQ+RFR L RVK+MRE+REL+++L+ H +H+
Sbjct: 7 DSSTVINRSSIALLQERFRQLERVKEMREQRELMRMLAQPKHHEHVHLNLINPTNNMHYD 66
Query: 67 TAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG------AEVAPLVDLWPAPDAIN 126
F+R EL+ + ++PP+ SLS+ P SQ + G APL +
Sbjct: 67 QQPSRLFFRSELVFPSRSSPPQASLSIGPPSQSKHAGYTTGSAGAEAPL----SMESSWR 126
Query: 127 ACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL 143
DD + L + + DSDS S+VDTSLHL
Sbjct: 127 PTDDTPASVLTSL---NKFKDSDSDSDVDTSLHL 153
BLAST of MS010717 vs. NCBI nr
Match:
PNS97230.1 (hypothetical protein POPTR_016G009200 [Populus trichocarpa])
HSP 1 Score: 72.8 bits (177), Expect = 2.7e-09
Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 0
Query: 3 MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGT 62
M N + P+V SSIALLQ+RFR L RVK MREE+EL K+L S L + + A
Sbjct: 1 MGNENNDPVVIQSSIALLQERFRQLQRVKAMREEKELSKVLVESPRQLSPSMQYEPAASR 60
Query: 63 FFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLW-----PAPDAINACDDRS 122
F+ PEL++ + PP LSL P Q ++ G W PA + + S
Sbjct: 61 LFFHPELILQPRSVPPHICLSLRPNPQSKQAG--------FWCELDTPALMSSSPTKTLS 120
Query: 123 TASLIRIDDDDNIDDSDSCSEVDTSLHL 143
+ L+ DD DD D +DTSLHL
Sbjct: 121 SHGLLDKFDDSATDDDD----IDTSLHL 136
BLAST of MS010717 vs. NCBI nr
Match:
KAF9664391.1 (hypothetical protein SADUNF_Sadunf16G0013700 [Salix dunnii])
HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 3 MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLS----SHTLLHFPTAVG 62
M N + P+V SSIALLQ+RFR L RVK MREE+EL K+L+ S S T+ + P+A
Sbjct: 1 MGNENNDPIVIQSSIALLQERFRQLQRVKAMREEKELSKVLAESPKQLSPTMQYKPSASR 60
Query: 63 TFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLW--PAPDAINACDDRSTA 122
FF PEL++ + PPR LSL P +Q ++ G W P +++ ++ +
Sbjct: 61 LFF-HPELILQPRSVPPRICLSLWPNTQSKQGG--------FWCEDTPALMSSSPAKTPS 120
Query: 123 SLIRIDD-DDNIDDSDSCSEVDTSLHL 143
+ +D DD+ D D ++DTSLHL
Sbjct: 121 NHGLVDKFDDHATDHD---DIDTSLHL 135
BLAST of MS010717 vs. ExPASy TrEMBL
Match:
A0A0B2SB04 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_019093 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0
Query: 10 PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMI 69
P V SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S + + FF PEL++
Sbjct: 8 PTVFRSSIVLLQERFRQLHRVKEMRKKKELLKMLTTSEPKPFNSNPTMRQFF-HPELIIP 67
Query: 70 TAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDD 129
+ ++PP SLSL P SQP + +D AP A N ST + + NI D
Sbjct: 68 SRSSPPHVSLSLGPTSQPMQ--EYTKSTID---APVANNMLSIDSTHNQVSC---KNIYD 127
Query: 130 SDSCSE--VDTSLHL 143
DS ++ VDTSLHL
Sbjct: 128 WDSGTDSIVDTSLHL 133
BLAST of MS010717 vs. ExPASy TrEMBL
Match:
K7L3Z6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_07G266600 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0
Query: 10 PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMI 69
P V SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S + + FF PEL++
Sbjct: 8 PTVFRSSIVLLQERFRQLHRVKEMRKKKELLKMLTTSEPKPFNSNPTMRQFF-HPELIIP 67
Query: 70 TAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDD 129
+ ++PP SLSL P SQP + +D AP A N ST + + NI D
Sbjct: 68 SRSSPPHVSLSLGPTSQPMQ--EYTKSTID---APVANNMLSIDSTHNQVSC---KNIYD 127
Query: 130 SDSCSE--VDTSLHL 143
DS ++ VDTSLHL
Sbjct: 128 WDSGTDSIVDTSLHL 133
BLAST of MS010717 vs. ExPASy TrEMBL
Match:
B9IH40 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G009200 PE=4 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 0
Query: 3 MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGT 62
M N + P+V SSIALLQ+RFR L RVK MREE+EL K+L S L + + A
Sbjct: 1 MGNENNDPVVIQSSIALLQERFRQLQRVKAMREEKELSKVLVESPRQLSPSMQYEPAASR 60
Query: 63 FFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLW-----PAPDAINACDDRS 122
F+ PEL++ + PP LSL P Q ++ G W PA + + S
Sbjct: 61 LFFHPELILQPRSVPPHICLSLRPNPQSKQAG--------FWCELDTPALMSSSPTKTLS 120
Query: 123 TASLIRIDDDDNIDDSDSCSEVDTSLHL 143
+ L+ DD DD D +DTSLHL
Sbjct: 121 SHGLLDKFDDSATDDDD----IDTSLHL 136
BLAST of MS010717 vs. ExPASy TrEMBL
Match:
A0A5N6QA05 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000070 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 0
Query: 12 VAPSSIALLQQRFRDLHRVKQMREERELLKLLS-LSSHTLLHFP---TAVGTFFWRPELM 71
V SSIALLQ+RFR L RVK+MREEREL+++L+ + H LH P F+ EL
Sbjct: 11 VIHSSIALLQERFRQLQRVKEMREERELMRMLAEPNKHLNLHPPMPSEQPSRLFFHSEL- 70
Query: 72 MITAAAPPRTSLSLSPISQPQKVGAEVAP---LVDLWPAPDAINACDDRSTASLIRIDDD 131
+I +PP+ SLS+SP SQ ++ V +V+ W D D RS+ + D
Sbjct: 71 IIPPRSPPQASLSISPPSQSRRADYPVGDTPLVVNSWRHTD-----DHRSSVNEFNDSDS 130
Query: 132 DNIDDSDSCSEVDTSLHL 143
D+ S+VDTSLHL
Sbjct: 131 DH-------SKVDTSLHL 135
BLAST of MS010717 vs. ExPASy TrEMBL
Match:
A0A4U5QLV7 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000088060 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 0
Query: 3 MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSL-----SSHTL-LHFPTA 62
M + P+V SSIALLQ+RFR L RVK MREEREL + +++ SS T+ H P A
Sbjct: 1 MGKENTDPIVIQSSIALLQERFRQLQRVKAMREERELSRNINVESTKQSSPTMQYHEPAA 60
Query: 63 VGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG---AEVAPLVDLWP--APDAINACD 122
F+ PEL ++ +PP LSL P Q ++ G E L+ L P P + D
Sbjct: 61 ANRLFFHPEL-ILQPRSPPHVCLSLWPNPQSKQAGFRFEETPALMSLSPTKTPPKLGVLD 120
Query: 123 DRSTASLIRIDDDDNIDDSDSCSEVDTSLHL 143
++ DDDD+ ++DTSLHL
Sbjct: 121 KFDASA---TDDDDD--------DIDTSLHL 139
BLAST of MS010717 vs. TAIR 10
Match:
AT4G16447.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 48.5 bits (114), Expect = 5.1e-06
Identity = 44/135 (32.59%), Postives = 59/135 (43.70%), Query Frame = 0
Query: 11 LVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHF---PTAVGTFFWRPELM 70
+V SSI LLQ+RFR L R +++R ERELL +L + PT+ G F + P
Sbjct: 12 MVIHSSIVLLQERFRQLQRARELRAERELLNPKPNHQDNILQYYSEPTSFGFFQFLP--- 71
Query: 71 MITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNI 130
+ + + + LSLS S E WP DD+ + R DD
Sbjct: 72 INSQTSSSQQLLSLSLCSHSTSESIEKPSFCHQWPNK------DDKKMGGIDRYDD---- 125
Query: 131 DDSDSCSEVDTSLHL 143
VDTSLHL
Sbjct: 132 --------VDTSLHL 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6594702.1 | 1.3e-11 | 40.79 | hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG5039132.1 | 1.6e-09 | 42.96 | hypothetical protein JHK86_019972 [Glycine max] >KHN42280.1 hypothetical protein... | [more] |
XP_042942642.1 | 2.1e-09 | 35.71 | uncharacterized protein LOC122276805 [Carya illinoinensis] >KAG2688587.1 hypothe... | [more] |
PNS97230.1 | 2.7e-09 | 38.51 | hypothetical protein POPTR_016G009200 [Populus trichocarpa] | [more] |
KAF9664391.1 | 6.0e-09 | 39.46 | hypothetical protein SADUNF_Sadunf16G0013700 [Salix dunnii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0B2SB04 | 7.7e-10 | 42.96 | Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_019093 PE=4 SV=1 | [more] |
K7L3Z6 | 7.7e-10 | 42.96 | Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_07G266600 PE=4 SV=1 | [more] |
B9IH40 | 1.3e-09 | 38.51 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G009200 PE=4 ... | [more] |
A0A5N6QA05 | 1.4e-08 | 41.30 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000070 PE=4 SV=1 | [more] |
A0A4U5QLV7 | 1.4e-08 | 38.41 | Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000088060 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G16447.1 | 5.1e-06 | 32.59 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |