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MS010714 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTTAAAATGGCTGCTTCATTCTGCATGTTATCTTCTGAATGAGGTCCATGCTTGTGCTAATGGAGGTGTCAAGACATCAGATGAAGAGAGAATTCCAAAAGGGAAAAAGGGTTGTGAAGAAATATGCAATTCTGCTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTATAACAAGGCAGATTACCAGAAGATGGAGGAATGGGAAGTGGATCTGCTTCTCAACCAGTACGGGATGGGCTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTCGCCATGGGCGCATTCCTATGGCCTGATCAGTTC ATGGCCTTAAAATGGCTGCTTCATTCTGCATGTTATCTTCTGAATGAGGTCCATGCTTGTGCTAATGGAGGTGTCAAGACATCAGATGAAGAGAGAATTCCAAAAGGGAAAAAGGGTTGTGAAGAAATATGCAATTCTGCTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTATAACAAGGCAGATTACCAGAAGATGGAGGAATGGGAAGTGGATCTGCTTCTCAACCAGTACGGGATGGGCTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTCGCCATGGGCGCATTCCTATGGCCTGATCAGTTC ATGGCCTTAAAATGGCTGCTTCATTCTGCATGTTATCTTCTGAATGAGGTCCATGCTTGTGCTAATGGAGGTGTCAAGACATCAGATGAAGAGAGAATTCCAAAAGGGAAAAAGGGTTGTGAAGAAATATGCAATTCTGCTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTATAACAAGGCAGATTACCAGAAGATGGAGGAATGGGAAGTGGATCTGCTTCTCAACCAGTACGGGATGGGCTTTGAAGGCAGTTTGGAGGAGAAGAGGGCCTTCGCCATGGGCGCATTCCTATGGCCTGATCAGTTC MALKWLLHSACYLLNEVHACANGGVKTSDEERIPKGKKGCEEICNSASGFQMPLHYPRYNKADYQKMEEWEVDLLLNQYGMGFEGSLEEKRAFAMGAFLWPDQF Homology
BLAST of MS010714 vs. NCBI nr
Match: XP_022132797.1 (uncharacterized protein LOC111005569 [Momordica charantia]) HSP 1 Score: 226.9 bits (577), Expect = 8.2e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MS010714 vs. NCBI nr
Match: KAG6603827.1 (hypothetical protein SDJN03_04436, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034009.1 hypothetical protein SDJN02_03735, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.4 bits (363), Expect = 5.4e-31 Identity = 72/104 (69.23%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of MS010714 vs. NCBI nr
Match: XP_038882557.1 (uncharacterized protein LOC120073788 [Benincasa hispida]) HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31 Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of MS010714 vs. NCBI nr
Match: XP_011658113.1 (uncharacterized protein LOC105435946 [Cucumis sativus] >KGN49041.1 hypothetical protein Csa_003579 [Cucumis sativus]) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30 Identity = 73/106 (68.87%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of MS010714 vs. NCBI nr
Match: TYK12988.1 (uncharacterized protein E5676_scaffold255G005850 [Cucumis melo var. makuwa]) HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30 Identity = 70/107 (65.42%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of MS010714 vs. ExPASy TrEMBL
Match: A0A6J1BUU9 (uncharacterized protein LOC111005569 OS=Momordica charantia OX=3673 GN=LOC111005569 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.0e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MS010714 vs. ExPASy TrEMBL
Match: A0A0A0KMW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511080 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31 Identity = 73/106 (68.87%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of MS010714 vs. ExPASy TrEMBL
Match: A0A5D3CP92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005850 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30 Identity = 70/107 (65.42%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of MS010714 vs. ExPASy TrEMBL
Match: A0A2I4EWP3 (uncharacterized protein LOC108993380 OS=Juglans regia OX=51240 GN=LOC108993380 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.1e-26 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of MS010714 vs. ExPASy TrEMBL
Match: A0A7N2LSP9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26 Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of MS010714 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18 Identity = 37/56 (66.07%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of MS010714 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 5.2e-16 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of MS010714 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 80.9 bits (198), Expect = 6.8e-16 Identity = 34/57 (59.65%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of MS010714 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14 Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of MS010714 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09 Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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