Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCGCCACAACACCAAGCGAGCCAGAGAATCATTATCAGCATCAGCCGCATCAGCCGATGATGCTGTGAGCTACGAGCGATCTTATTCTTCGCCGCCGGAGATCGGCAACGTGAAGAAGCAGCATACCGACGGCGGCGGCGGGCAGGGAGCCACTGGAAGGTCGTTTGATTTGGACGTGTTCGATTTCCCGTGGTTGAAGGACAGCCTGATTTCGAAATCGGAGGACTGGAAATTCGAGGACGTCTTCTTCACGTCCTTGGACAGTAACGGAGCGTCCACCGCGGACGATACGCTCACAATTGGAACGGCGTTTACGGAGTTGTCGGGGCAATTGCTGTGGTGCGATCCTGGATCGTTGCCGGATCCTTACGAGGCGGAGGCGCTGCCGGCGTTGGACGGCGGAGGGGCGGAGGGGATGGATTGTATTTGGAACTCCCTGCTAAATCAGCCGCTCCGACAA
mRNA sequence
ATGGACCGCCACAACACCAAGCGAGCCAGAGAATCATTATCAGCATCAGCCGCATCAGCCGATGATGCTGTGAGCTACGAGCGATCTTATTCTTCGCCGCCGGAGATCGGCAACGTGAAGAAGCAGCATACCGACGGCGGCGGCGGGCAGGGAGCCACTGGAAGGTCGTTTGATTTGGACGTGTTCGATTTCCCGTGGTTGAAGGACAGCCTGATTTCGAAATCGGAGGACTGGAAATTCGAGGACGTCTTCTTCACGTCCTTGGACAGTAACGGAGCGTCCACCGCGGACGATACGCTCACAATTGGAACGGCGTTTACGGAGTTGTCGGGGCAATTGCTGTGGTGCGATCCTGGATCGTTGCCGGATCCTTACGAGGCGGAGGCGCTGCCGGCGTTGGACGGCGGAGGGGCGGAGGGGATGGATTGTATTTGGAACTCCCTGCTAAATCAGCCGCTCCGACAA
Coding sequence (CDS)
ATGGACCGCCACAACACCAAGCGAGCCAGAGAATCATTATCAGCATCAGCCGCATCAGCCGATGATGCTGTGAGCTACGAGCGATCTTATTCTTCGCCGCCGGAGATCGGCAACGTGAAGAAGCAGCATACCGACGGCGGCGGCGGGCAGGGAGCCACTGGAAGGTCGTTTGATTTGGACGTGTTCGATTTCCCGTGGTTGAAGGACAGCCTGATTTCGAAATCGGAGGACTGGAAATTCGAGGACGTCTTCTTCACGTCCTTGGACAGTAACGGAGCGTCCACCGCGGACGATACGCTCACAATTGGAACGGCGTTTACGGAGTTGTCGGGGCAATTGCTGTGGTGCGATCCTGGATCGTTGCCGGATCCTTACGAGGCGGAGGCGCTGCCGGCGTTGGACGGCGGAGGGGCGGAGGGGATGGATTGTATTTGGAACTCCCTGCTAAATCAGCCGCTCCGACAA
Protein sequence
MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGSLPDPYEAEALPALDGGGAEGMDCIWNSLLNQPLRQ
Homology
BLAST of MS010687 vs. NCBI nr
Match:
XP_022132712.1 (uncharacterized protein LOC111005508, partial [Momordica charantia])
HSP 1 Score: 258.1 bits (658), Expect = 5.0e-65
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD 60
MDRHNTKRARESLSASAAS+DDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRS DLD
Sbjct: 1 MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSSDLD 60
Query: 61 VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS 120
VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS
Sbjct: 61 VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS 120
Query: 121 LPDPYEAEAL 131
LPDPYEAEAL
Sbjct: 121 LPDPYEAEAL 130
BLAST of MS010687 vs. NCBI nr
Match:
KGN49015.1 (hypothetical protein Csa_004415 [Cucumis sativus])
HSP 1 Score: 145.2 bits (365), Expect = 4.7e-31
Identity = 97/173 (56.07%), Postives = 113/173 (65.32%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD 60
M+RHNTKR RE S+S +S D + Y++ SS PEI NVK+QH+ + + G SFD D
Sbjct: 1 MERHNTKRPRE--SSSLSSPPDGI-YDQ--SSLPEIANVKRQHSHDNAQESSPGTSFDFD 60
Query: 61 -----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGTAFTELSGQ 120
VFDFPWLKD LI SKS+DWKFEDVFFTS+ NGASTAD LTIGTAFTE
Sbjct: 61 LLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSV-YNGASTADIATPLTIGTAFTEF--- 120
Query: 121 LLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ 156
LPDP YEA+A P+LDGG G E MDCIW S+LNQPL+Q
Sbjct: 121 --------LPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQ 156
BLAST of MS010687 vs. NCBI nr
Match:
KAG6594718.1 (hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 137.9 bits (346), Expect = 7.5e-29
Identity = 93/175 (53.14%), Postives = 107/175 (61.14%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERS-YSSPPEIGN-VKKQHTDGGGGQGATGRSFD 60
MDR N KR RES S+S++S+ + + R+ SS PEIGN K+QH +G GR FD
Sbjct: 1 MDRRNAKRPRESSSSSSSSSSSSSAGVRNEQSSQPEIGNGEKRQHVEG------FGRLFD 60
Query: 61 LD----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQL 120
LD VFDFPWLKDSLI SK EDWK EDVFFTS D G ST D A TE S QL
Sbjct: 61 LDLSFGVFDFPWLKDSLIYSKYEDWKVEDVFFTSFD--GVSTTAD-----IALTEWSEQL 120
Query: 121 LWCDPGSLPDP----YEAEALPAL---------DGGGAEGMDCIWNSLLNQPLRQ 156
+WC +LPDP YEA PA +G EGMDC+WNSLLNQPL+Q
Sbjct: 121 VWC---NLPDPWEEEYEAHVAPATATATAVEDGEGPAGEGMDCVWNSLLNQPLQQ 159
BLAST of MS010687 vs. NCBI nr
Match:
KAA0025593.1 (hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK12468.1 hypothetical protein E5676_scaffold255G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 31 SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDV 90
SSPPEI NVK+QH+ D + G SFD D VFDFPWLKD LI SKS+DWKFEDV
Sbjct: 5 SSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWKFEDV 64
Query: 91 FFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGSLPDP----YEAEAL----PA 150
FFTS+ + +ST D LTIGT AFTE LPDP YEA+AL P+
Sbjct: 65 FFTSVYNGASSTFDIATPLTIGTKAFTEF-----------LPDPWEKDYEAQALPQPPPS 124
Query: 151 LDGG--GAEGMDCIWNSLLNQPLRQ 156
LDGG G EGMDCIW S+LNQPL+Q
Sbjct: 125 LDGGEQGGEGMDCIWRSVLNQPLQQ 138
BLAST of MS010687 vs. NCBI nr
Match:
KAG6603846.1 (hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 124.4 bits (311), Expect = 8.6e-25
Identity = 92/172 (53.49%), Postives = 104/172 (60.47%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGR 60
MDR +TKR RES SA+ SS PEIGN KKQ GG T
Sbjct: 1 MDRQSTKRPRES------SAEQ--------SSLPEIGNGKKQRLHGGSDDAKEPLPRTFF 60
Query: 61 SFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQ 120
FDL VFDFPWLK+SLI S+SEDWK +DVFFTS NG STAD T TIGT + SGQ
Sbjct: 61 DFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSF-YNGLSTADAT-TIGTELS--SGQ 120
Query: 121 LLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ 156
L+W +LPDP YEA+ P DGGG EG+DCIW+SLLNQPL+Q
Sbjct: 121 LVW---SNLPDPWEAEYEAQVPPTTLDDGGGGQAGEGIDCIWSSLLNQPLQQ 151
BLAST of MS010687 vs. ExPASy TrEMBL
Match:
A0A6J1BUL5 (uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005508 PE=4 SV=1)
HSP 1 Score: 258.1 bits (658), Expect = 2.4e-65
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD 60
MDRHNTKRARESLSASAAS+DDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRS DLD
Sbjct: 1 MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSSDLD 60
Query: 61 VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS 120
VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS
Sbjct: 61 VFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGS 120
Query: 121 LPDPYEAEAL 131
LPDPYEAEAL
Sbjct: 121 LPDPYEAEAL 130
BLAST of MS010687 vs. ExPASy TrEMBL
Match:
A0A0A0KH39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 97/173 (56.07%), Postives = 113/173 (65.32%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD 60
M+RHNTKR RE S+S +S D + Y++ SS PEI NVK+QH+ + + G SFD D
Sbjct: 1 MERHNTKRPRE--SSSLSSPPDGI-YDQ--SSLPEIANVKRQHSHDNAQESSPGTSFDFD 60
Query: 61 -----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGTAFTELSGQ 120
VFDFPWLKD LI SKS+DWKFEDVFFTS+ NGASTAD LTIGTAFTE
Sbjct: 61 LLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSV-YNGASTADIATPLTIGTAFTEF--- 120
Query: 121 LLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ 156
LPDP YEA+A P+LDGG G E MDCIW S+LNQPL+Q
Sbjct: 121 --------LPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQ 156
BLAST of MS010687 vs. ExPASy TrEMBL
Match:
A0A5A7SLQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00440 PE=4 SV=1)
HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 83/145 (57.24%), Postives = 94/145 (64.83%), Query Frame = 0
Query: 31 SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDV 90
SSPPEI NVK+QH+ D + G SFD D VFDFPWLKD LI SKS+DWKFEDV
Sbjct: 5 SSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWKFEDV 64
Query: 91 FFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGSLPDP----YEAEAL----PA 150
FFTS+ + +ST D LTIGT AFTE LPDP YEA+AL P+
Sbjct: 65 FFTSVYNGASSTFDIATPLTIGTKAFTEF-----------LPDPWEKDYEAQALPQPPPS 124
Query: 151 LDGG--GAEGMDCIWNSLLNQPLRQ 156
LDGG G EGMDCIW S+LNQPL+Q
Sbjct: 125 LDGGEQGGEGMDCIWRSVLNQPLQQ 138
BLAST of MS010687 vs. ExPASy TrEMBL
Match:
A0A6J1IJM6 (uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029 PE=4 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23
Identity = 90/172 (52.33%), Postives = 103/172 (59.88%), Query Frame = 0
Query: 1 MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGR 60
M+R +TKR RES SA+ SS EIGN KKQ GG T
Sbjct: 1 MERQSTKRPRES------SAEQ--------SSLLEIGNGKKQRLHGGSDDAKEPLPRTFY 60
Query: 61 SFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQ 120
FDL VFDFPWLK+SLI S+SEDWK +DVFFTS NG STAD T +IGT + SGQ
Sbjct: 61 DFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSF-YNGLSTADAT-SIGTELS--SGQ 120
Query: 121 LLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ 156
L+W +LPDP YEA+ P DGGG EGMDCIW+SLLNQPL+Q
Sbjct: 121 LVW---SNLPDPWEAEYEAQVPPTTLDDGGGGQAGEGMDCIWSSLLNQPLQQ 151
BLAST of MS010687 vs. ExPASy TrEMBL
Match:
A0A6P9ENN9 (uncharacterized protein LOC108996550 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996550 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16
Identity = 57/128 (44.53%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 35 EIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGAS 94
EI N+KK + + D+ VFDFPWLKD +ISKSEDW+FED F +SL + S
Sbjct: 45 EISNMKKLD---------SSIALDVGVFDFPWLKDGMISKSEDWRFEDAFSSSLIPHDNS 104
Query: 95 TADDTLTIGTAFTELSGQLLWCDPGSLP-------DPYEAEALPALDGGGAEGMDCIWNS 154
T TA E SGQ L P +P D A+P DG EG+DCIW+S
Sbjct: 105 TT-------TAAIEFSGQCLCRTPEEVPYLPENKFDDSLCWAVPEGDGLETEGLDCIWSS 156
Query: 155 LLNQPLRQ 156
LL+QPL+Q
Sbjct: 165 LLSQPLQQ 156
BLAST of MS010687 vs. TAIR 10
Match:
AT1G64800.1 (DNA binding;sequence-specific DNA binding transcription factors )
HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 28/92 (30.43%), Postives = 37/92 (40.22%), Query Frame = 0
Query: 59 LDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDP 118
L VF+FPW+K+S+IS S DW + F LD G E + W P
Sbjct: 47 LGVFEFPWMKESMISTSLDWSLPESMFPVLDD------------GNEMFEEISDVRW--P 106
Query: 119 GSLPDPYEAEALPALDGGGAEGMDCIWNSLLN 151
Y E E +CIW S+L+
Sbjct: 107 VKRVSNYRLE---------FEAFECIWTSILD 115
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022132712.1 | 5.0e-65 | 98.46 | uncharacterized protein LOC111005508, partial [Momordica charantia] | [more] |
KGN49015.1 | 4.7e-31 | 56.07 | hypothetical protein Csa_004415 [Cucumis sativus] | [more] |
KAG6594718.1 | 7.5e-29 | 53.14 | hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0025593.1 | 3.5e-26 | 57.24 | hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK1246... | [more] |
KAG6603846.1 | 8.6e-25 | 53.49 | hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BUL5 | 2.4e-65 | 98.46 | uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A0A0KH39 | 2.3e-31 | 56.07 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1 | [more] |
A0A5A7SLQ6 | 1.7e-26 | 57.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1IJM6 | 1.3e-23 | 52.33 | uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029... | [more] |
A0A6P9ENN9 | 7.8e-16 | 44.53 | uncharacterized protein LOC108996550 isoform X2 OS=Juglans regia OX=51240 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |
AT1G64800.1 | 3.0e-04 | 30.43 | DNA binding;sequence-specific DNA binding transcription factors | [more] |