MS010669 (gene) Bitter gourd (TR) v1

Overview


Name	MS010669
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RWP-RK domain-containing protein
Location	scaffold35: 1296029 .. 1296777 (-)
RNA-Seq Expression	MS010669
Synteny	MS010669

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGGTTTAAGTTCCACACACTCACTAAACAGGAGAGAATTTTGAACTTCTTATGGCACAAATAGAATTCATATCAGGAGATCATGTGTGCTCTATTATGAAAGTTACTAAACAGGTGGGGAATTGCTGGTAATTGCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGTTACCATTTCTTCCTACTTTGTAGCTTAACACTTTACTGCAACCTAGAAAGGCACATTGTTTATGGAAAAGGGTGTTTGTAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTT

mRNA sequence

CTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGGTGGGGAATTGCTGGTAATTGCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTT

Coding sequence (CDS)

CTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGGTGGGGAATTGCTGGTAATTGCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTT

Protein sequence

LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV

Homology

[Close]

BLAST of MS010669 vs. NCBI nr
Match: XP_022132648.1 (protein RKD5 [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 7.7e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH
Sbjct: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 72

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 73  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 132

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES
Sbjct: 133 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 192

Query: 181 QGTSV 186
           QGTSV
Sbjct: 193 QGTSV 197

[Close]

BLAST of MS010669 vs. NCBI nr
Match: XP_038882831.1 (protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform X1 [Benincasa hispida] >XP_038882833.1 protein RKD5 isoform X1 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L N KFHQPRNLPLL+QDLNFLPCS A S+GSE++MKE  EPGGEL VIA KK+RATSEH
Sbjct: 17  LKNSKFHQPRNLPLLDQDLNFLPCSVAVSKGSESEMKEFCEPGGELPVIAAKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHRE+DHKALMAVTKRQ MLQ+ERESIE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q +SV
Sbjct: 197 QSSSV 201

[Close]

BLAST of MS010669 vs. NCBI nr
Match: XP_038882834.1 (protein RKD5 isoform X2 [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78
Identity = 156/185 (84.32%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L N KFHQPRNLPLL+QDLNFLPCS A S+GSE++MKE  EP     VIA KK+RATSEH
Sbjct: 17  LKNSKFHQPRNLPLLDQDLNFLPCSVAVSKGSESEMKEFCEP-----VIAAKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHRE+DHKALMAVTKRQ MLQ+ERESIE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREDDHKALMAVTKRQMMLQNERESIERTPFRELEIETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q +SV
Sbjct: 197 QSSSV 196

[Close]

BLAST of MS010669 vs. NCBI nr
Match: XP_011658076.1 (protein RKD5 isoform X1 [Cucumis sativus] >KAE8647629.1 hypothetical protein Csa_003920 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 2.7e-78
Identity = 155/185 (83.78%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L NGK HQPRNLPLL+QDLNFLPCS + S+ S NQM+ES   GGEL+ I EKK+RATSEH
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASGGELIGIVEKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IA ITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q  SV
Sbjct: 197 QSPSV 201

[Close]

BLAST of MS010669 vs. NCBI nr
Match: XP_016899254.1 (PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo var. makuwa] >TYK12483.1 protein RKD5 [Cucumis melo var. makuwa])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 155/185 (83.78%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +  G    IAEKK+RATSEH
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESG----IAEKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q  SV
Sbjct: 197 QSPSV 197

[Close]

BLAST of MS010669 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.8e-40
Identity = 98/194 (50.52%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 3   NGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYE---------PGGELLVIAEKK 62
           N    +PR L +L+QDLN LP S   SE S N+  E  E                I +KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEILKKK 232

Query: 63  KRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 122
           KR  S H+A ++L +L+KYFDL I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 123 LIRDLQEEA-KHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRR 182
           LI DLQ EA K +E++  A MAV K+Q  L++E+ +I   PF E+  ET++FRQ+ F++R
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

Query: 183 HKA-RALESQGTSV 186
           H+A RA ++Q + V
Sbjct: 353 HRASRAKKNQESLV 365

[Close]

BLAST of MS010669 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 52  KKKRATSEHIAGITLS------DLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPH 111
           KK+R   E  +  ++S       ++ YF +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 112 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRF 171
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE  P  + E +T+R 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 172 RQDVFRRRHKARALESQGTSV 186
           RQ  F+  HK +      T +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of MS010669 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-17
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 48  VIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 107
           +I++     TS     ++   +++YF +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK
Sbjct: 119 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

Query: 108 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQD 167
           + S++ LI +++E  K   E++     +     ML+ E+ +IE  P  E + +T+R RQ 
Sbjct: 179 LMSLNTLISNVKELQKMEGEENAE--KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQA 238

Query: 168 VFRRRH---KARALESQGTSV 186
            F+  H   K R+L+S  + V
Sbjct: 239 CFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of MS010669 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.2e-17
Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 48  VIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 107
           V  +KK+    +    + +S++ ++FD PI +A++ LNVGLTVLK++CRE GI+RWPHRK
Sbjct: 132 VTVKKKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

Query: 108 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQD 167
           +KS++ LI++L+             + + +  + L+  R  IE  P  EL   T++ RQ 
Sbjct: 192 LKSLNSLIKNLKN------------VGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQA 248

Query: 168 VFRRRHKAR 177
            F+  +K R
Sbjct: 252 CFKANYKRR 248

[Close]

BLAST of MS010669 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 69  LAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLI---RDLQEEAKHR 128
           + +YF +PIT+A++ LN+G+T+LK++CRE GI RWPHRK+ S++ LI   +DL    K R
Sbjct: 164 MKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGR 223

Query: 129 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGT 184
               K   A+     +L+ E++ IE  P  E   +T+R RQ  F+ ++K R L S  +
Sbjct: 224 TPKSKLRNAL----ELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of MS010669 vs. ExPASy TrEMBL
Match: A0A6J1BWV1 (protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.7e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH
Sbjct: 13  LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 72

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 73  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 132

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES
Sbjct: 133 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 192

Query: 181 QGTSV 186
           QGTSV
Sbjct: 193 QGTSV 197

[Close]

BLAST of MS010669 vs. ExPASy TrEMBL
Match: A0A5A7SHH9 (Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 155/185 (83.78%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +  G    IAEKK+RATSEH
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESG----IAEKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q  SV
Sbjct: 197 QSPSV 197

[Close]

BLAST of MS010669 vs. ExPASy TrEMBL
Match: A0A1S4DTD9 (protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 155/185 (83.78%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L NGK HQPRNLPLL+QDLNFLPCS + S+GS NQM+ES +  G    IAEKK+RATSEH
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKGSGNQMEESCDESG----IAEKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IAGITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IAGITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE+ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELESETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q  SV
Sbjct: 197 QSPSV 197

[Close]

BLAST of MS010669 vs. ExPASy TrEMBL
Match: A0A0A0KGY8 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.2e-75
Identity = 152/185 (82.16%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEH 60
           L NGK HQPRNLPLL+QDLNFLPCS + S+ S NQM+ES   G     I EKK+RATSEH
Sbjct: 17  LKNGKSHQPRNLPLLDQDLNFLPCSVSVSKESGNQMEESCASG-----IVEKKRRATSEH 76

Query: 61  IAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 120
           IA ITLSDLAK F +PITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE
Sbjct: 77  IARITLSDLAKNFGVPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQE 136

Query: 121 EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALES 180
           EAKHREEDHKALMAVTKRQ MLQ+ERE IE TPFRELE ET+RFRQDVFRR+HKARALES
Sbjct: 137 EAKHREEDHKALMAVTKRQMMLQNERERIERTPFRELENETKRFRQDVFRRKHKARALES 196

Query: 181 QGTSV 186
           Q  SV
Sbjct: 197 QSPSV 196

[Close]

BLAST of MS010669 vs. ExPASy TrEMBL
Match: A0A6J1GEC7 (protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.7e-65
Identity = 143/183 (78.14%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   LNNGKFHQPRNLPLLEQDLNFLPCSA--AASEGSE-NQMKESYEPGGELLVIAEKKKRAT 60
           LN+ KF        L QDLNFLPCS+  A S+G E +QMKE  EP     V+A+KK+RAT
Sbjct: 28  LNDEKF--------LHQDLNFLPCSSSMAVSKGPEIHQMKELCEP-----VLAKKKRRAT 87

Query: 61  SEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRD 120
           SEHIAGI LSDLAKYFD+PITEASR+LNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRD
Sbjct: 88  SEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRD 147

Query: 121 LQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARA 180
           LQEEAKHREED KALMAVTKRQ MLQ+ERESIE TPFRELE+ET+RFRQDVF+RRHKARA
Sbjct: 148 LQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA 197

[Close]

BLAST of MS010669 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-41
Identity = 98/194 (50.52%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 3   NGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYE---------PGGELLVIAEKK 62
           N    +PR L +L+QDLN LP S   SE S N+  E  E                I +KK
Sbjct: 173 NSDLPKPRKL-VLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEILKKK 232

Query: 63  KRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDG 122
           KR  S H+A ++L +L+KYFDL I EASRNL VGLTVLK+KCREFGI RWPHRKIKS+D 
Sbjct: 233 KRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDC 292

Query: 123 LIRDLQEEA-KHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRR 182
           LI DLQ EA K +E++  A MAV K+Q  L++E+ +I   PF E+  ET++FRQ+ F++R
Sbjct: 293 LIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKR 352

Query: 183 HKA-RALESQGTSV 186
           H+A RA ++Q + V
Sbjct: 353 HRASRAKKNQESLV 365

[Close]

BLAST of MS010669 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 91.3 bits (225), Expect = 8.9e-19
Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 52  KKKRATSEHIAGITLS------DLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPH 111
           KK+R   E  +  ++S       ++ YF +PIT+A+R LN+GLT+LK++CRE GI RWPH
Sbjct: 110 KKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPH 169

Query: 112 RKIKSIDGLIRDLQE-EAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRF 171
           RK+ S+  LI +++E E    EE+   L    ++   L+ E+++IE  P  + E +T+R 
Sbjct: 170 RKLMSLQKLISNVKELEKMEGEENEDKLRNALEK---LEKEKKTIEKLPDLKFEDKTKRL 229

Query: 172 RQDVFRRRHKARALESQGTSV 186
           RQ  F+  HK +      T +
Sbjct: 230 RQACFKANHKRKRRSGMSTPI 247

[Close]

BLAST of MS010669 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-18
Identity = 53/141 (37.59%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 48  VIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 107
           +I++     TS     ++   +++YF +PIT+A+  LNVGLT+LKR+CRE GI RWPHRK
Sbjct: 119 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

Query: 108 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQD 167
           + S++ LI +++E  K   E++     +     ML+ E+ +IE  P  E + +T+R RQ 
Sbjct: 179 LMSLNTLISNVKELQKMEGEENAE--KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQA 238

Query: 168 VFRRRH---KARALESQGTSV 186
            F+  H   K R+L+S  + V
Sbjct: 239 CFKANHKRKKKRSLKSDQSQV 257

[Close]

BLAST of MS010669 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-18
Identity = 47/129 (36.43%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 48  VIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRK 107
           V  +KK+    +    + +S++ ++FD PI +A++ LNVGLTVLK++CRE GI+RWPHRK
Sbjct: 132 VTVKKKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

Query: 108 IKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQD 167
           +KS++ LI++L+             + + +  + L+  R  IE  P  EL   T++ RQ 
Sbjct: 192 LKSLNSLIKNLKN------------VGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQA 248

Query: 168 VFRRRHKAR 177
            F+  +K R
Sbjct: 252 CFKANYKRR 248

[Close]

BLAST of MS010669 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 69  LAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLI---RDLQEEAKHR 128
           + +YF +PIT+A++ LN+G+T+LK++CRE GI RWPHRK+ S++ LI   +DL    K R
Sbjct: 164 MKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTKGR 223

Query: 129 EEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGT 184
               K   A+     +L+ E++ IE  P  E   +T+R RQ  F+ ++K R L S  +
Sbjct: 224 TPKSKLRNAL----ELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

The following BLAST results are available for this feature:

BLAST of MS010669 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132648.1	7.7e-97	100.00	protein RKD5 [Momordica charantia]	[more]
XP_038882831.1	2.4e-82	86.49	protein RKD5 isoform X1 [Benincasa hispida] >XP_038882832.1 protein RKD5 isoform...	[more]
XP_038882834.1	2.1e-78	84.32	protein RKD5 isoform X2 [Benincasa hispida]	[more]
XP_011658076.1	2.7e-78	83.78	protein RKD5 isoform X1 [Cucumis sativus] >KAE8647629.1 hypothetical protein Csa...	[more]
XP_016899254.1	1.4e-77	83.78	PREDICTED: protein RKD5 [Cucumis melo] >KAA0025608.1 protein RKD5 [Cucumis melo ...	[more]

BLAST of MS010669 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81791	6.8e-40	50.52	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]
Q9M9U9	1.3e-17	36.88	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9CA66	4.8e-17	37.59	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9LVU8	6.2e-17	36.43	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9FGD1	2.0e-15	39.83	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]

BLAST of MS010669 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWV1	3.7e-97	100.00	protein RKD5 OS=Momordica charantia OX=3673 GN=LOC111005457 PE=4 SV=1	[more]
A0A5A7SHH9	6.6e-78	83.78	Protein RKD5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00600 P...	[more]
A0A1S4DTD9	6.6e-78	83.78	protein RKD5 OS=Cucumis melo OX=3656 GN=LOC103485193 PE=4 SV=1	[more]
A0A0A0KGY8	5.2e-75	82.16	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509650 PE=4...	[more]
A0A6J1GEC7	1.7e-65	78.14	protein RKD5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453407 PE=4 ...	[more]

BLAST of MS010669 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35590.1	4.9e-41	50.52	RWP-RK domain-containing protein	[more]
AT1G18790.1	8.9e-19	36.88	RWP-RK domain-containing protein	[more]
AT1G74480.1	3.4e-18	37.59	RWP-RK domain-containing protein	[more]
AT5G53040.1	4.4e-18	36.43	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.4e-16	39.83	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	PANTHER	PTHR46373:SF12	PROTEIN RKD5	coord: 15..181
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 64..111 e-value: 5.8E-23 score: 80.6
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 46..131 score: 18.678381
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 15..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010669.1	MS010669.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity