MS010667 (gene) Bitter gourd (TR) v1

Overview
NameMS010667
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2H2-type domain-containing protein
Locationscaffold35: 1284084 .. 1284662 (+)
RNA-Seq ExpressionMS010667
SyntenyMS010667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGGACCATAACAACCAAGACTCCTCCTCCGACGAGCACCGCGGTGGTGGCAGCGACGATGTCGATGGCAACACCCCTCCCAAGACTCCTACCGGTGGCTTCGAGGACGTCGTAGTTTCTTCTTCCCCGCAGGAGACTTCTGGGAAGAAGAGAGGGCGAGCCGAGGAGCAAGCAGGAGGGTCGAGTAGTGGCGGCGGGAAGGGGAAGAAGAAGGGGGAACTGACCGACCCGCCCTCCACCGACCCGAAATGCGCCACGTGTGGCAAGATTTTCGGCTCGTGGAAGGCGGTATTCGGGCACCTACGGTCCCACCCGGAGCGGGACTACCGCGGGGCCTTCCCGCCGCCGAAAATGTGGGAGGAGATGCTTCGGCAGGAGGCAGTGCGGCGGCAGCATGGTCAAGACCAAGGCAGCAGCACCACAGAGATGGGGACAGGGACGTCTTCTCCGTCCGGCCGGGGGATCGGAATCGATCTTAATGACCCGGAAAAGCCCCACAGCCCGCCGGATAAGGGCGGCTTCCCGTTTGATCTCAACATGCCGGCACCGGAGAGTGACGAGGAGGATCACAAA

mRNA sequence

ATGGAGAGGGACCATAACAACCAAGACTCCTCCTCCGACGAGCACCGCGGTGGTGGCAGCGACGATGTCGATGGCAACACCCCTCCCAAGACTCCTACCGGTGGCTTCGAGGACGTCGTAGTTTCTTCTTCCCCGCAGGAGACTTCTGGGAAGAAGAGAGGGCGAGCCGAGGAGCAAGCAGGAGGGTCGAGTAGTGGCGGCGGGAAGGGGAAGAAGAAGGGGGAACTGACCGACCCGCCCTCCACCGACCCGAAATGCGCCACGTGTGGCAAGATTTTCGGCTCGTGGAAGGCGGTATTCGGGCACCTACGGTCCCACCCGGAGCGGGACTACCGCGGGGCCTTCCCGCCGCCGAAAATGTGGGAGGAGATGCTTCGGCAGGAGGCAGTGCGGCGGCAGCATGGTCAAGACCAAGGCAGCAGCACCACAGAGATGGGGACAGGGACGTCTTCTCCGTCCGGCCGGGGGATCGGAATCGATCTTAATGACCCGGAAAAGCCCCACAGCCCGCCGGATAAGGGCGGCTTCCCGTTTGATCTCAACATGCCGGCACCGGAGAGTGACGAGGAGGATCACAAA

Coding sequence (CDS)

ATGGAGAGGGACCATAACAACCAAGACTCCTCCTCCGACGAGCACCGCGGTGGTGGCAGCGACGATGTCGATGGCAACACCCCTCCCAAGACTCCTACCGGTGGCTTCGAGGACGTCGTAGTTTCTTCTTCCCCGCAGGAGACTTCTGGGAAGAAGAGAGGGCGAGCCGAGGAGCAAGCAGGAGGGTCGAGTAGTGGCGGCGGGAAGGGGAAGAAGAAGGGGGAACTGACCGACCCGCCCTCCACCGACCCGAAATGCGCCACGTGTGGCAAGATTTTCGGCTCGTGGAAGGCGGTATTCGGGCACCTACGGTCCCACCCGGAGCGGGACTACCGCGGGGCCTTCCCGCCGCCGAAAATGTGGGAGGAGATGCTTCGGCAGGAGGCAGTGCGGCGGCAGCATGGTCAAGACCAAGGCAGCAGCACCACAGAGATGGGGACAGGGACGTCTTCTCCGTCCGGCCGGGGGATCGGAATCGATCTTAATGACCCGGAAAAGCCCCACAGCCCGCCGGATAAGGGCGGCTTCCCGTTTGATCTCAACATGCCGGCACCGGAGAGTGACGAGGAGGATCACAAA

Protein sequence

MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK
Homology
BLAST of MS010667 vs. NCBI nr
Match: XP_022132655.1 (uncharacterized protein LOC111005461 [Momordica charantia])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA 60
           MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA
Sbjct: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA 60

Query: 61  GGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM 120
           GGSSSGGGKGKKKGEL DPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM
Sbjct: 61  GGSSSGGGKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM 120

Query: 121 WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL 180
           WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL
Sbjct: 121 WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL 180

Query: 181 NMPAPESDEEDHK 194
           NMPAPESDEEDHK
Sbjct: 181 NMPAPESDEEDHK 193

BLAST of MS010667 vs. NCBI nr
Match: XP_038882231.1 (zinc finger protein ZAT4-like [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 7.6e-55
Identity = 132/209 (63.16%), Postives = 148/209 (70.81%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGF-EDVVVSS---------------S 60
           MERD  ++ S  +   GGG     GN+PPK PT    EDVVVSS               S
Sbjct: 1   MERD-PDKSSPGNSPSGGGDGGDSGNSPPKAPTDTVEEDVVVSSSFLAPVTTVDITWALS 60

Query: 61  PQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
           PQE+ GKKRGR E++ G S+ GG KGKKKGEL DPPST+PKCATCGK FGSWKAVFGHLR
Sbjct: 61  PQESYGKKRGRGEDEGGSSTGGGQKGKKKGELIDPPSTEPKCATCGKTFGSWKAVFGHLR 120

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDP 180
           SHPER+YRGAFPPPK+WEEMLRQE  RRQH  D+GSS    G   +  SGRGI IDLNDP
Sbjct: 121 SHPEREYRGAFPPPKIWEEMLRQETARRQHA-DEGSSGHVEG-AAAGMSGRGIEIDLNDP 180

Query: 181 EKPHSPPDKGGFPFDLNMPAPESDEEDHK 194
           E+P +  DK  FPFDLNMPAPE+DEED K
Sbjct: 181 EEPEA--DKDEFPFDLNMPAPENDEEDDK 204

BLAST of MS010667 vs. NCBI nr
Match: XP_011658503.1 (uncharacterized protein LOC105436035 [Cucumis sativus] >KGN48990.1 hypothetical protein Csa_004427 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 4.6e-52
Identity = 124/208 (59.62%), Postives = 142/208 (68.27%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETS 60
           ME+D + + S S    GG   D            D       P     D+ ++ SPQE+ 
Sbjct: 1   MEKDDHEKSSPSGSSNGGDGGDTPSKAIADTHEDDVAVSSSAPVRSSIDITLTLSPQESY 60

Query: 61  GKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPE 120
           G+KRGR E+  GGSSSG G KGKKKGEL DPPSTDPKCATCGKIFGSWKAVFGHLRSHPE
Sbjct: 61  GRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHPE 120

Query: 121 RDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPE 180
           RDYRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGIGIDLNDPE
Sbjct: 121 RDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIGIDLNDPE 180

Query: 181 KPHSPPDKGGFPFDLNMPAPESDEEDHK 194
                 D+  FPFDLN PAPE++EED K
Sbjct: 181 AQEGNKDE--FPFDLNEPAPENEEEDDK 206

BLAST of MS010667 vs. NCBI nr
Match: KAG7034043.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.9 bits (546), Expect = 6.0e-52
Identity = 129/213 (60.56%), Postives = 144/213 (67.61%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SP 60
           MERDHN     +    GGG     G+TPP T T   +DVVVSS               S 
Sbjct: 16  MERDHNESSPENSTSHGGGG----GDTPPMTLTNTPDDVVVSSSFPVPPTMTFDMAPYSS 75

Query: 61  QETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
            E SG+KRGRAE+  GGSS G G KGKKKGEL DPPSTDPKCATCGK FGSWKAVFGHLR
Sbjct: 76  PEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLR 135

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIG 180
           SHPERDYRGAFPPPK+WEEML+QEA        QGSS T +G       G S PSGRGIG
Sbjct: 136 SHPERDYRGAFPPPKVWEEMLQQEA-------RQGSSGTTIGCSVGGEMGMSPPSGRGIG 195

Query: 181 IDLNDPEKPHSPPDKGGFPFDLNMPAPESDEED 192
           IDLNDP++  +   + GFPFDLNMPAPE++E+D
Sbjct: 196 IDLNDPDEQGA--RREGFPFDLNMPAPENEEDD 215

BLAST of MS010667 vs. NCBI nr
Match: KAA0025611.1 (zinc finger protein ZAT4 [Cucumis melo var. makuwa] >TYK12486.1 zinc finger protein ZAT4 [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 129/212 (60.85%), Postives = 148/212 (69.81%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SP 60
           ME+DH+    S   + G GSD    +TP K  T   E DV VSS              SP
Sbjct: 1   MEKDHDKSSPSGSSNGGDGSD----HTPSKAITVTHEDDVAVSSSSAPVRTIDITLTLSP 60

Query: 61  QETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
           QE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST PKCATCGK FGSWKAVFGHLR
Sbjct: 61  QESYGRKRGRAEDHGGGSSSGSGQKGKKKGELIDPPSTAPKCATCGKTFGSWKAVFGHLR 120

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDL 180
           SHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDL
Sbjct: 121 SHPEREYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIEIDL 180

Query: 181 NDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK 194
           NDPE+  +  D+  FPFDLN PAPE++EED K
Sbjct: 181 NDPEEQEANKDE--FPFDLNEPAPENEEEDDK 206

BLAST of MS010667 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 33/80 (41.25%), Postives = 42/80 (52.50%), Query Frame = 0

Query: 41  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKA 100
           +SSS   +  KKR +    +  SS       K  +  DP  P     C  CG+ F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 101 VFGHLRSHPERDYRGAFPPP 119
           +FGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

BLAST of MS010667 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0

Query: 26  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD-- 85
           N+ P +        V   S  +   +KR +      GSSS   + K   +  DP ++   
Sbjct: 6   NSDPNSDIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSSSSSPRPKPVTQ-PDPDASQIA 65

Query: 86  PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP 118
             C  CGK FGS KA+FGH+R HPER +RG  PP
Sbjct: 66  RPCTECGKQFGSLKALFGHMRCHPERQWRGINPP 98

BLAST of MS010667 vs. ExPASy TrEMBL
Match: A0A6J1BT29 (uncharacterized protein LOC111005461 OS=Momordica charantia OX=3673 GN=LOC111005461 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.5e-104
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA 60
           MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA
Sbjct: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQA 60

Query: 61  GGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM 120
           GGSSSGGGKGKKKGEL DPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM
Sbjct: 61  GGSSSGGGKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM 120

Query: 121 WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL 180
           WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL
Sbjct: 121 WEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDL 180

Query: 181 NMPAPESDEEDHK 194
           NMPAPESDEEDHK
Sbjct: 181 NMPAPESDEEDHK 193

BLAST of MS010667 vs. ExPASy TrEMBL
Match: A0A0A0KGW4 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509590 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.2e-52
Identity = 124/208 (59.62%), Postives = 142/208 (68.27%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETS 60
           ME+D + + S S    GG   D            D       P     D+ ++ SPQE+ 
Sbjct: 1   MEKDDHEKSSPSGSSNGGDGGDTPSKAIADTHEDDVAVSSSAPVRSSIDITLTLSPQESY 60

Query: 61  GKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPE 120
           G+KRGR E+  GGSSSG G KGKKKGEL DPPSTDPKCATCGKIFGSWKAVFGHLRSHPE
Sbjct: 61  GRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHPE 120

Query: 121 RDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPE 180
           RDYRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGIGIDLNDPE
Sbjct: 121 RDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIGIDLNDPE 180

Query: 181 KPHSPPDKGGFPFDLNMPAPESDEEDHK 194
                 D+  FPFDLN PAPE++EED K
Sbjct: 181 AQEGNKDE--FPFDLNEPAPENEEEDDK 206

BLAST of MS010667 vs. ExPASy TrEMBL
Match: A0A5D3CPY3 (Zinc finger protein ZAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00630 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.9e-52
Identity = 129/212 (60.85%), Postives = 148/212 (69.81%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SP 60
           ME+DH+    S   + G GSD    +TP K  T   E DV VSS              SP
Sbjct: 1   MEKDHDKSSPSGSSNGGDGSD----HTPSKAITVTHEDDVAVSSSSAPVRTIDITLTLSP 60

Query: 61  QETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
           QE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST PKCATCGK FGSWKAVFGHLR
Sbjct: 61  QESYGRKRGRAEDHGGGSSSGSGQKGKKKGELIDPPSTAPKCATCGKTFGSWKAVFGHLR 120

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDL 180
           SHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDL
Sbjct: 121 SHPEREYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIEIDL 180

Query: 181 NDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK 194
           NDPE+  +  D+  FPFDLN PAPE++EED K
Sbjct: 181 NDPEEQEANKDE--FPFDLNEPAPENEEEDDK 206

BLAST of MS010667 vs. ExPASy TrEMBL
Match: A0A6J1GEL2 (uncharacterized protein LOC111453468 OS=Cucurbita moschata OX=3662 GN=LOC111453468 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.5e-52
Identity = 129/213 (60.56%), Postives = 143/213 (67.14%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SP 60
           MERDHN     +    GGG     G TPP T T   +DVVVSS               S 
Sbjct: 16  MERDHNESSPENSTSHGGGG----GYTPPMTLTNTPDDVVVSSSFPVPPTMTFDMAPYSS 75

Query: 61  QETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
            E SG+KRGRAE+  GGSS G G KGKKKGEL DPPSTDPKCATCGK FGSWKAVFGHLR
Sbjct: 76  PEASGRKRGRAEQHVGGSSCGSGQKGKKKGELIDPPSTDPKCATCGKAFGSWKAVFGHLR 135

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIG 180
           SHPERDYRGAFPPPK+WEEML+QEA        QGSS T +G       G S PSGRGIG
Sbjct: 136 SHPERDYRGAFPPPKVWEEMLQQEA-------RQGSSGTTIGCSVGGEMGMSPPSGRGIG 195

Query: 181 IDLNDPEKPHSPPDKGGFPFDLNMPAPESDEED 192
           IDLNDP++  +   + GFPFDLNMPAPE++E+D
Sbjct: 196 IDLNDPDEQGA--RREGFPFDLNMPAPENEEDD 215

BLAST of MS010667 vs. ExPASy TrEMBL
Match: A0A1S3B298 (zinc finger protein ZAT4 OS=Cucumis melo OX=3656 GN=LOC103485364 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 128/212 (60.38%), Postives = 147/212 (69.34%), Query Frame = 0

Query: 1   MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SP 60
           ME+DH+    S   + G G D    +TP K  T   E DV VSS              SP
Sbjct: 1   MEKDHDKSSPSGSSNGGDGGD----HTPSKAITVTHEDDVAVSSSSAPVRTIDITLTLSP 60

Query: 61  QETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 120
           QE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST PKCATCGK FGSWKAVFGHLR
Sbjct: 61  QESYGRKRGRAEDHGGGSSSGSGQKGKKKGELIDPPSTAPKCATCGKTFGSWKAVFGHLR 120

Query: 121 SHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDL 180
           SHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDL
Sbjct: 121 SHPEREYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIEIDL 180

Query: 181 NDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK 194
           NDPE+  +  D+  FPFDLN PAPE++EED K
Sbjct: 181 NDPEEQEANKDE--FPFDLNEPAPENEEEDDK 206

BLAST of MS010667 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 62/174 (35.63%), Postives = 76/174 (43.68%), Query Frame = 0

Query: 51  KKRGRAEEQAGGSSSGGGKG------KKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLR 110
           K R R   Q      G G+G      KK  ELT PP   P C  CG+ FGSWKAVFGH+R
Sbjct: 99  KSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFGHMR 158

Query: 111 SHPERDYRGAFPPP--KMWEEMLRQEAVR--------------------RQHGQDQGSST 170
           +H +R+Y+G  PPP      E      +R                    R  G   GS  
Sbjct: 159 AHRDRNYQGFLPPPTFSAGAERFVIPGLRSAFTIATVGGGSSGGVAVGGRSSGDFSGSGG 218

Query: 171 TEMGTGTSSPSGRGIGIDLN-DPEKPHSPPDKGG--FPFDLNMPAPESDEEDHK 194
              G    S  GRG GIDLN +P +      + G    FDLN   P+ +EE+ K
Sbjct: 219 ---GDAPGSEGGRGSGIDLNVEPVEQVEEATESGCIAKFDLNKSPPKDEEEEDK 269

BLAST of MS010667 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 55/146 (37.67%), Postives = 68/146 (46.58%), Query Frame = 0

Query: 69  KGKKKG--ELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP--KMWEEM 128
           K +KKG  +LT  P   P C  CGK F SWKAVFGHLR H +R Y G  PPP     EE 
Sbjct: 125 KPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAEEG 184

Query: 129 LRQEAVRRQHGQ--------DQGSSTTEMGTGTSSPSGRGI-------GIDLN-DPEKPH 188
               A     G         +  ++++  G  T+S  G G+        IDLN DP +  
Sbjct: 185 FGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLNADPVEEE 244

Query: 189 SPPDKGGF--PFDLN-MPAPESDEED 192
                 G    FDLN  P P+ DEE+
Sbjct: 245 DKVIGVGSKRKFDLNRSPPPDGDEEN 270

BLAST of MS010667 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08
Identity = 33/80 (41.25%), Postives = 42/80 (52.50%), Query Frame = 0

Query: 41  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKA 100
           +SSS   +  KKR +    +  SS       K  +  DP  P     C  CG+ F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 101 VFGHLRSHPERDYRGAFPPP 119
           +FGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

BLAST of MS010667 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 48.1 bits (113), Expect = 9.0e-06
Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 0

Query: 86  CATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM 121
           C  C K F S KA++GH+R HP+R ++G  PPP +
Sbjct: 132 CCVCYKKFTSMKALYGHMRFHPDRGWKGVLPPPPL 166

BLAST of MS010667 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0

Query: 26  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD-- 85
           N+ P +        V   S  +   +KR +      GSSS   + K   +  DP ++   
Sbjct: 6   NSDPNSDIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSSSSSPRPKPVTQ-PDPDASQIA 65

Query: 86  PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP 118
             C  CGK FGS KA+FGH+R HPER +RG  PP
Sbjct: 66  RPCTECGKQFGSLKALFGHMRCHPERQWRGINPP 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132655.12.0e-10399.48uncharacterized protein LOC111005461 [Momordica charantia][more]
XP_038882231.17.6e-5563.16zinc finger protein ZAT4-like [Benincasa hispida][more]
XP_011658503.14.6e-5259.62uncharacterized protein LOC105436035 [Cucumis sativus] >KGN48990.1 hypothetical ... [more]
KAG7034043.16.0e-5260.56Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAA0025611.11.0e-5160.85zinc finger protein ZAT4 [Cucumis melo var. makuwa] >TYK12486.1 zinc finger prot... [more]
Match NameE-valueIdentityDescription
O654992.7e-0741.25Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1[more]
Q9SIJ02.8e-0436.17Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1BT299.5e-10499.48uncharacterized protein LOC111005461 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A0A0KGW42.2e-5259.62C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509590 P... [more]
A0A5D3CPY34.9e-5260.85Zinc finger protein ZAT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1GEL26.5e-5260.56uncharacterized protein LOC111453468 OS=Cucurbita moschata OX=3662 GN=LOC1114534... [more]
A0A1S3B2981.4e-5160.38zinc finger protein ZAT4 OS=Cucumis melo OX=3656 GN=LOC103485364 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G35610.15.8e-1335.63zinc finger (C2H2 type) family protein [more]
AT4G35700.11.0e-0937.67zinc finger (C2H2 type) family protein [more]
AT4G35280.11.9e-0841.25C2H2-like zinc finger protein [more]
AT5G56200.19.0e-0648.57C2H2 type zinc finger transcription factor family [more]
AT2G17180.12.0e-0536.17C2H2-like zinc finger protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR47591ZINC FINGER PROTEIN ZAT2-RELATEDcoord: 34..192
NoneNo IPR availablePANTHERPTHR47591:SF4TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKEcoord: 34..192
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 86..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS010667.1MS010667.1mRNA